prot_H-paniculata_contig4396.11139.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4396.11139.1
Unique Nameprot_H-paniculata_contig4396.11139.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length610
Homology
BLAST of mRNA_H-paniculata_contig4396.11139.1 vs. uniprot
Match: D7FR03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR03_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 2.120e-73
Identity = 251/718 (34.96%), Postives = 334/718 (46.52%), Query Frame = 0
Query:    1 RSGETIRAIEAMLE-GGGAGYLPMCARDLPEAIAVLGSRSMSPKSVRNRDKSNNRNVHRK-RGRNITEKEGWDKPK-----ATG--ESPIPQKD-----------GQTGCDNASSEAGNYQTDGRKFLSDRVRQDTTSERFLHPWQRKLEADKRDKLSSNIDEDLMQLAKDRRXXXXXXXXXXGSEHCRRAGRRVAA--------------RLGRQ--RRRFRSRAGGHTAQGRSQHSCIANNA-GTNEEPECVGEG------NGKIVI-------GSEYSVEQMRDSLVWARKTMISLVKRLGHKGIDVPPLRSVDELTTPVAG------DFKHLVGKLQQHLTSFEDDVATLGTQLISTT----AGEATSRVLGQRCDEACEVFESEFCRMIERLISVENVTQLNEVGPPVNPLSTCTATTVAASVSMQQGS-------------------RSSHLGLCPSCTILPVSRRCLDCEGDTADRDRCSGCFVRDHREAVRRNHCFLRIS-IGGSGGSSXXXXXXXXXXXXR-------RGDAVRCSKCGDLAASRRCLSCGGLDMCAACHFLTHRSPSRRSHVTEFLGENAVFVQEALHHHRTTA--------EHNKETGE-------ADVAHSIMSKPAS------AGKDGSDRATVSPAPVSSVRRNEIKGEGVDSRTHCDGKAGGDGQRDAGVFGKDAVRSLEEVRRTVPPPVVRP 610
            RS ETI AIEAMLE GGG  YLP  ARDLPEA+AVLG       S   +DK+      +K R R   +K G D  +      TG  ES    +D           G++G D   +  G   T          + +   ERFLHPWQR LEADKR              A + R            + CRR  RR AA              RLGRQ  RR  R R+G     G+       +   G+    +  G+G      + ++V+         + S+ Q+RD+L WARKT+ +L+KRL  +GI +   R+         G      +   ++ KL++ + +FED+  +LG    +T     AG A +R    +C+ ACE FE++FC +I+ L +          G P +P     +T++    S   GS                   RS   GLC SC++LPV+RRCLDC+GD  DRDRCS CFVR+HR+A R+ H FLRIS  G  GG +            +        G   RCS+CGDLAA+RRC  C  +DMCAACHFL HRSPS+RSHVTEF+GE AV +QEAL      A        E + + GE       A  + S  S P++       G  GSDR       V +V R   +G G +S    +G            FGK A +SL +VRRT+  P V P
Sbjct:  326 RSRETICAIEAMLEEGGGDSYLPARARDLPEALAVLGPPKPESSS---KDKARGSTARKKLRHRGAGKKSGEDPERENNGHGTGGEESHRTTRDALEASAENGSTGRSGNDPGPNTGGEGHTRKTSPGWPSAKPERAEERFLHPWQRALEADKR--------------AVNARTGGQHEAALLEEQRCRREARRAAAESKDXXXXXXXXXARLGRQHGRRGRRHRSGKSRVHGKGDRKMAPDRPEGSESRAKLNGQGYEVSSRDREVVLHRCGGDEDDDDSLRQLRDALGWARKTLEALMKRLKDRGIAIESARAAAARGGGGLGGAAKDWEIVRVLNKLRRRVAAFEDEGISLGVNKATTAEEGVAGAAEAR---SKCEAACESFEADFCHLIDELTATAK-------GLPSHPDLQLRSTSITHWASESSGSVPPGPGGAAASDPASRTTFRSLSFGLCSSCSVLPVARRCLDCDGD--DRDRCSSCFVREHRDADRQRHRFLRISGCGREGGGTVAGPRRGAASAEKGAVQEDSSGGGARCSRCGDLAAARRCRDCS-VDMCAACHFLAHRSPSKRSHVTEFVGETAVSMQEALQSRNWGAAAGSAAAREISNDGGEVAAKESGASSSSSPFSSPSTPQASRNVGNSGSDR-------VDAVSREAREGWGRESPVPGEGS-----------FGKGAAQSLAQVRRTIDAPAVPP 995          
BLAST of mRNA_H-paniculata_contig4396.11139.1 vs. uniprot
Match: A0A6H5L541_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L541_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 4.750e-71
Identity = 249/705 (35.32%), Postives = 324/705 (45.96%), Query Frame = 0
Query:    1 RSGETIRAIEAMLE-GGGAGYLPMCARDLPEAIAVLG---------SRSMSPKSVRNRDKSNNRNVHRKRGRNITEKEGWDKP-----KATGESPIPQKDGQTGCDNASSEAGNYQTDGRKFLSDRVRQDTTSERFLHPWQRKLEADKRDKLSSNIDEDLMQLAKDRRXXXXXXXXXXGSEHCRRAGRRVAA--------------RLGRQ---RRRFRSRAGGHT--------AQGRSQHSCIANNAGTNEEPECVGEGNGKIVIGSEYSVE-------QMRDSLVWARKTMISLVKRLGHKGIDVPPLRSVDELTTPVAG------DFKHLVGKLQQHLTSFEDDVATLGTQLISTT----AGEATSRVLGQRCDEACEVFESEFCRMIERLISVENVTQLNEVGPPVNPLSTCTATTVAASVSMQQGSR-------------------SSHLGLCPSCTILPVSRRCLDCEGDTADRDRCSGCFVRDHREAVRRNHCFLRISIGGSGGSSXXXXXXXXXXXXRRG--------DAVRCSKCGDLAASRRCLSCGGLDMCAACHFLTHRSPSRRSHVTEFLGENAVFVQEALHHHR--TTAEHNKETGEADVAHSIMSKPASAGKDGSDRATVSPAPVSSVRRNEI----KGEGVD-----SRTHCDGKAGGDGQRDAGVFGKDAVRSLEEVRRTVPPPVVRP 610
            RS ETI AIEAMLE GGG  YLP  ARDLPEA+AVLG          ++    + R   K +  N+ RK   + T  E  D+      +A+ E+    + G     NA  E    +T      +   R     ERFLHPWQR LEA KR              A + R            + CRR  RR AA              RLGRQ   RRR R               A  R + S   N A  N +   V   +G +   S    E       Q+RD+L WARKT+ +LVKRL  +GI V   R+  E      G      +   ++ KL++ + +FED+  +L     +      AG A +R    +C+ ACE FE++FC +I+ L ++         G P +P     +T+V        G+                    S   GLCPSC++LPV+RRCLDC+GD  DRDRCS CFVR+HR+A R+ H FLRIS  G  G+              +G          VRCS+CGDLAA+RRC  C  +DMCAACHFL HRSPSRRSHVTEF+GE AV +QEALH     T A      G  D    + ++ +         A+ SP+P SS    ++       G D     SR   +G+ G       G FGK A +SL  VRRT+  P V P
Sbjct:  749 RSRETICAIEAMLEEGGGDSYLPARARDLPEALAVLGPPKPESSSEDKAKGGTAHRGAGKKSGGNLERKNNGHDTGGEESDRATRNALEASAENGSTGRSGNDAGPNAGGEGHTRKTPPGWPSAKPAR---AEERFLHPWQRALEASKR--------------AVNARTGGQHEAALLEEQRCRREARRAAAESKXXXXXXXXXXARLGRQHGHRRRRRXXXXXXXXXXXXXKMAPDRPERS--ENRAELNGQGYGVSSRDGDVGFHSRCCDEDDDDYLRQLRDALGWARKTLEALVKRLKDRGIAVEGARAAAESGGGGLGGAAKDWEIVRVLNKLRRRVAAFEDEGISLDVNKATAAEEGLAGAAEAR---SKCEAACESFEADFCHLIDELTAMAK-------GLPSHPDLQLRSTSVTHRALEASGNAHPGPGGAAAPDAPRRTTFGSLSFGLCPSCSVLPVARRCLDCDGD--DRDRCSSCFVREHRDADRQRHRFLRISGCGREGAGTVAAPPRRAASVEKGAVQEDSSGGGVRCSRCGDLAAARRCRDCR-VDMCAACHFLAHRSPSRRSHVTEFVGEAAVSMQEALHSRNRGTAAGSAAARGSRDDGGEVAARESG--------ASCSPSPCSSPSTPQVFRTVGDSGSDRVVTVSREALEGREGETPVPGEGSFGKGAAQSLALVRRTIDAPAVPP 1413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4396.11139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR03_ECTSI2.120e-7334.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L541_9PHAE4.750e-7135.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4396contigH-paniculata_contig4396:693..2635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4396.11139.1mRNA_H-paniculata_contig4396.11139.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4396 693..2635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4396.11139.1 ID=prot_H-paniculata_contig4396.11139.1|Name=mRNA_H-paniculata_contig4396.11139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=610bp
RSGETIRAIEAMLEGGGAGYLPMCARDLPEAIAVLGSRSMSPKSVRNRDK
SNNRNVHRKRGRNITEKEGWDKPKATGESPIPQKDGQTGCDNASSEAGNY
QTDGRKFLSDRVRQDTTSERFLHPWQRKLEADKRDKLSSNIDEDLMQLAK
DRRRRRQERRAAAGSEHCRRAGRRVAARLGRQRRRFRSRAGGHTAQGRSQ
HSCIANNAGTNEEPECVGEGNGKIVIGSEYSVEQMRDSLVWARKTMISLV
KRLGHKGIDVPPLRSVDELTTPVAGDFKHLVGKLQQHLTSFEDDVATLGT
QLISTTAGEATSRVLGQRCDEACEVFESEFCRMIERLISVENVTQLNEVG
PPVNPLSTCTATTVAASVSMQQGSRSSHLGLCPSCTILPVSRRCLDCEGD
TADRDRCSGCFVRDHREAVRRNHCFLRISIGGSGGSSGSGGGDIGGGGDR
RGDAVRCSKCGDLAASRRCLSCGGLDMCAACHFLTHRSPSRRSHVTEFLG
ENAVFVQEALHHHRTTAEHNKETGEADVAHSIMSKPASAGKDGSDRATVS
PAPVSSVRRNEIKGEGVDSRTHCDGKAGGDGQRDAGVFGKDAVRSLEEVR
RTVPPPVVRP
back to top