prot_H-paniculata_contig4393.11135.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4393.11135.1
Unique Nameprot_H-paniculata_contig4393.11135.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A6H5LBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBF2_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 3.870e-76
Identity = 129/171 (75.44%), Postives = 149/171 (87.13%), Query Frame = 0
Query:   17 NLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAGAGLAATLAPTCLTFFVIG 187
            NL AYW +LR  N+P+SFGLVAAGALVASH+  +LL+PKV+ TA AAAA+SVGSCVLNDWFDIELDRVN+P RPLVTGEV+P HAL +G+ FL  A+ SAS V+PAALQATI+ASVALT AYTPLLKP+PLVKNFVVA VIA AI +GGLAAGAG+A+TL P+ LTFFVIG
Sbjct:  132 NLSAYWEILRPNNIPASFGLVAAGALVASHTAVALLEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAVASASFVNPAALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIAAAIGAGGLAAGAGVASTLTPSVLTFFVIG 302          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: D8LD89_ECTSI (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD89_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.790e-71
Identity = 121/180 (67.22%), Postives = 142/180 (78.89%), Query Frame = 0
Query:    8 DDATSPREPNLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAGAGLAATLAPTCLTFFVIG 187
            D +   + PNL AYW +LR  N+P+SFGLVAAGALVASH+  +L +PKV+ TA AAAA+SVGSCVLNDWFDIELDRVN+P RPLVTGEV+P HAL +G+ FL  A+ SAS V+PAALQATI+ASVALT AYTPLLKP+PLVKNFVVA VI            AG+A+TL P+ LTFFVIG
Sbjct:    5 DSSKEKKSPNLSAYWEILRPNNIPASFGLVAAGALVASHTAVALFEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAVASASFVNPAALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIXXXXXXXXXXXXAGVASTLTPSVLTFFVIG 184          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A4D9D7Q9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Q9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.540e-15
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 0
Query:   21 YWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVAL 113
            Y  +LR QNV  S  LV  GA + +  ++ +L P V   A+ +A ++VGSCVLND+FD  +DR+N P R LV G++ P HAL++ L+ L+ AL
Sbjct:   18 YIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIHALLLALSCLTTAL 110          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: W7TY68_9STRA (Prenyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY68_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.190e-14
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 0
Query:   21 YWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVAL 113
            Y  +LR QNV  S  LV  GA + +  ++ +L P V   A+ +A ++VGSCVLND+FD  +DR+N P R LV G++ P +AL++ L+ L+ AL
Sbjct:  116 YIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTAL 208          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A2P6TD11_CHLSO (Pyruvate carboxylase n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TD11_CHLSO)

HSP 1 Score: 79.0 bits (193), Expect = 1.010e-13
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = 0
Query:   18 LRAYWTLLRIQNVPSSFGLVAAGALV-ASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAGAG----LAATLAP 178
            L+ YW L+R  N   S  LV  GA   A  ++ +L    V F  +A+ A+++ SC +ND+FD ++D VN P +P+ +G +    AL++        L  A  V  A ++  +  S ALT  YTP+LK   LVKN VVA             AGAG    L A LAP
Sbjct:   58 LQGYWRLVRGWNALPSMALVLLGAWTGAGKTLLALKHLTVWFMGLASGAVAMASCTINDYFDADIDAVNDPQKPVPSGLIPRDRALLVAALLYIGLLALACLVPNAGVRLIVALSSALTVLYTPVLKKQTLVKNCVVAXXXXXXXXXXXXXAGAGGGPGLRAVLAP 223          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A6C0HC55_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HC55_9ZZZZ)

HSP 1 Score: 76.3 bits (186), Expect = 4.490e-13
Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = 0
Query:    9 DATSPREP--NLRAYWTLLRIQNV-PSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAA 168
            D+  P  P   + A++ L+R  N+ P++      G +V  H  + L  P  I        I   S +LND FDI LD++N P RPL+TGEV    A+ +    L +         P+ LQ  I  ++A    YTP+LK +P +KN   A ++A ++   GL A
Sbjct:   46 DSAKPFTPLQKVSAFFKLIRPSNILPTTLLTFTGGWIVNPHLFELLNTPSFIVGIFDTLLIMSTSMILNDLFDIPLDKINNPRRPLITGEVKVEEAIALSSILLGLTEYLNFMYLPSNLQIVIHTAIANILIYTPILKKIPFIKNLSCAGLVAFSVFFAGLTA 208          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: M0F9I3_9EURY (Digeranylgeranylglyceryl phosphate synthase n=42 Tax=Halorubraceae TaxID=1963271 RepID=M0F9I3_9EURY)

HSP 1 Score: 74.7 bits (182), Expect = 8.910e-13
Identity = 54/152 (35.53%), Postives = 81/152 (53.29%), Query Frame = 0
Query:   18 LRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAG 169
            LR    L R+ N  ++  L A GA VA  S  +L  P  +     A A++ G+ + ND+FD E+D VN+P+RP+  G V P  AL     + +VA+ +A A+ P A+    +  VAL + YT + K  P + N +VA ++      GG AAG
Sbjct:    5 LRGIVELARLGNCVAAGALTATGAFVAGASGAAL--PTALAAVTTAFAVAAGNAI-NDYFDREIDAVNRPDRPIPRGAVSPRGALATATVWFAVAVAAAVALPPLAIAIAAVNLVALVT-YTSIFKGTPGLGNALVAYLVGSTFLFGGAAAG 152          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A6B9Y2D5_9EURY (Digeranylgeranylglyceryl phosphate synthase n=3 Tax=Halobacteria TaxID=183963 RepID=A0A6B9Y2D5_9EURY)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-12
Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   18 LRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSC-VLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAG 169
            +R    L R  N  S+  L   GA VA  ++    D  V+  AV A  ++ G+   +ND+FD E+DRVN+P+RP+  G + P  AL   L   + A+V+A A+ PAA+   +  ++ L  AYT L K LP V N VV  +       GG A G
Sbjct:    7 VRGAIELTRPLNAISAGVLTGTGAYVAGGAVLGA-DADVVLAAVVATVLATGAGNAVNDYFDREIDRVNRPDRPIPRGAIAPRGALAFSLLLFAGAIVAALALPPAAIGLAVF-NLVLLVAYTELFKGLPGVGNVVVGFLTGSTFLFGGAAVG 157          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: DGGGP_SULTO (Digeranylgeranylglyceryl phosphate synthase n=3 Tax=Sulfurisphaera TaxID=69655 RepID=DGGGP_SULTO)

HSP 1 Score: 73.6 bits (179), Expect = 2.380e-12
Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 0
Query:   17 NLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLA--AGAGLAATLAPTCLTFF 184
            +++AY+ L+RI NV  S   V  G +VAS     ++  K+I   +  + I+ G  ++ND FDIE+D++NKPNRPL +G +    A  + +    V +V +  ++  A    ++  +AL   Y   LK   LV N +VA   A +   GGLA   G+ +  TL PT   FF
Sbjct:    2 SVKAYFELVRIHNVIGSAISVFMGYVVASE--WKIVPIKLILAMIVVSVIAAGGYIINDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYY-YAKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLIPTLYIFF 168          
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A1Y1HSM7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSM7_KLENI)

HSP 1 Score: 73.6 bits (179), Expect = 3.700e-12
Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   24 LLRIQNVPSSFGLVAAGALVAS-HSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIE--LDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVA 154
            + R+QN   SF LV  GA +AS H  + +L PKV  TA  +A I+V S + ND FD     D+ N+ + PL+TGEV P  A +        A++    + P  L+  +  +   T  YTP LK L +VKN +VA
Sbjct:   49 MARLQNYFPSFLLVVLGAWMASGHDARVILMPKVWITAACSALIAVASMLANDVFDFRSGTDQANERDTPLMTGEVAPDDAELAAGCLYGAAVIGICCLEPMTLRLLVGGAAVATYIYTPFLKRLLVVKNVIVA 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBF2_9PHAE3.870e-7675.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD89_ECTSI2.790e-7167.22Prenyltransferase, UbiA family, Putative 4-hydroxy... [more]
A0A4D9D7Q9_9STRA3.540e-1545.16Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TY68_9STRA3.190e-1444.09Prenyltransferase n=1 Tax=Nannochloropsis gaditana... [more]
A0A2P6TD11_CHLSO1.010e-1336.14Pyruvate carboxylase n=2 Tax=Chlorella sorokiniana... [more]
A0A6C0HC55_9ZZZZ4.490e-1332.52Uncharacterized protein n=1 Tax=viral metagenome T... [more]
M0F9I3_9EURY8.910e-1335.53Digeranylgeranylglyceryl phosphate synthase n=42 T... [more]
A0A6B9Y2D5_9EURY1.300e-1236.60Digeranylgeranylglyceryl phosphate synthase n=3 Ta... [more]
DGGGP_SULTO2.380e-1234.12Digeranylgeranylglyceryl phosphate synthase n=3 Ta... [more]
A0A1Y1HSM7_KLENI3.700e-1238.06Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.357.140coord: 24..182
e-value: 1.6E-11
score: 46.0
NoneNo IPR availablePANTHERPTHR42723:SF1coord: 11..179
NoneNo IPR availablePANTHERPTHR42723FAMILY NOT NAMEDcoord: 11..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 187..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 58..77
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
IPR000537UbiA prenyltransferase familyPFAMPF01040UbiAcoord: 37..184
e-value: 1.7E-23
score: 83.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4393contigH-paniculata_contig4393:9518..15597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4393.11135.1mRNA_H-paniculata_contig4393.11135.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4393 9512..15597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4393.11135.1 ID=prot_H-paniculata_contig4393.11135.1|Name=mRNA_H-paniculata_contig4393.11135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MPAAMMADDATSPREPNLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQS
LLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHH
ALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKN
FVVAAVIAGAISSGGLAAGAGLAATLAPTCLTFFVIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase