mRNA_H-paniculata_contig4393.11135.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A6H5LBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBF2_9PHAE) HSP 1 Score: 243 bits (619), Expect = 4.180e-76 Identity = 129/171 (75.44%), Postives = 149/171 (87.13%), Query Frame = 1
Query: 55 NLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAGAGLAATLAPTCLTFFVIG 567
NL AYW +LR N+P+SFGLVAAGALVASH+ +LL+PKV+ TA AAAA+SVGSCVLNDWFDIELDRVN+P RPLVTGEV+P HAL +G+ FL A+ SAS V+PAALQATI+ASVALT AYTPLLKP+PLVKNFVVA VIA AI +GGLAAGAG+A+TL P+ LTFFVIG
Sbjct: 132 NLSAYWEILRPNNIPASFGLVAAGALVASHTAVALLEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAVASASFVNPAALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIAAAIGAGGLAAGAGVASTLTPSVLTFFVIG 302
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: D8LD89_ECTSI (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD89_ECTSI) HSP 1 Score: 224 bits (572), Expect = 3.010e-71 Identity = 121/180 (67.22%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 28 DDATSPREPNLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAGAGLAATLAPTCLTFFVIG 567
D + + PNL AYW +LR N+P+SFGLVAAGALVASH+ +L +PKV+ TA AAAA+SVGSCVLNDWFDIELDRVN+P RPLVTGEV+P HAL +G+ FL A+ SAS V+PAALQATI+ASVALT AYTPLLKP+PLVKNFVVA VI AG+A+TL P+ LTFFVIG
Sbjct: 5 DSSKEKKSPNLSAYWEILRPNNIPASFGLVAAGALVASHTAVALFEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAVASASFVNPAALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIXXXXXXXXXXXXAGVASTLTPSVLTFFVIG 184
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A4D9D7Q9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Q9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.740e-15 Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 67 YWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVAL 345
Y +LR QNV S LV GA + + ++ +L P V A+ +A ++VGSCVLND+FD +DR+N P R LV G++ P HAL++ L+ L+ AL
Sbjct: 18 YIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIHALLLALSCLTTAL 110
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: W7TY68_9STRA (Prenyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY68_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.360e-14 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 67 YWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVAL 345
Y +LR QNV S LV GA + + ++ +L P V A+ +A ++VGSCVLND+FD +DR+N P R LV G++ P +AL++ L+ L+ AL
Sbjct: 116 YIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTAL 208
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A6C0HC55_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HC55_9ZZZZ) HSP 1 Score: 76.3 bits (186), Expect = 4.730e-13 Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = 1
Query: 31 DATSPREP--NLRAYWTLLRIQNV-PSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAA 510
D+ P P + A++ L+R N+ P++ G +V H + L P I I S +LND FDI LD++N P RPL+TGEV A+ + L + P+ LQ I ++A YTP+LK +P +KN A ++A ++ GL A
Sbjct: 46 DSAKPFTPLQKVSAFFKLIRPSNILPTTLLTFTGGWIVNPHLFELLNTPSFIVGIFDTLLIMSTSMILNDLFDIPLDKINNPRRPLITGEVKVEEAIALSSILLGLTEYLNFMYLPSNLQIVIHTAIANILIYTPILKKIPFIKNLSCAGLVAFSVFFAGLTA 208
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: M0F9I3_9EURY (Digeranylgeranylglyceryl phosphate synthase n=42 Tax=Halorubraceae TaxID=1963271 RepID=M0F9I3_9EURY) HSP 1 Score: 74.7 bits (182), Expect = 9.370e-13 Identity = 54/152 (35.53%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 58 LRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAG 513
LR L R+ N ++ L A GA VA S +L P + A A++ G+ + ND+FD E+D VN+P+RP+ G V P AL + +VA+ +A A+ P A+ + VAL + YT + K P + N +VA ++ GG AAG
Sbjct: 5 LRGIVELARLGNCVAAGALTATGAFVAGASGAAL--PTALAAVTTAFAVAAGNAI-NDYFDREIDAVNRPDRPIPRGAVSPRGALATATVWFAVAVAAAVALPPLAIAIAAVNLVALVT-YTSIFKGTPGLGNALVAYLVGSTFLFGGAAAG 152
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A6B9Y2D5_9EURY (Digeranylgeranylglyceryl phosphate synthase n=3 Tax=Halobacteria TaxID=183963 RepID=A0A6B9Y2D5_9EURY) HSP 1 Score: 74.3 bits (181), Expect = 1.370e-12 Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 58 LRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSC-VLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAG 513
+R L R N S+ L GA VA ++ D V+ AV A ++ G+ +ND+FD E+DRVN+P+RP+ G + P AL L + A+V+A A+ PAA+ + ++ L AYT L K LP V N VV + GG A G
Sbjct: 7 VRGAIELTRPLNAISAGVLTGTGAYVAGGAVLGA-DADVVLAAVVATVLATGAGNAVNDYFDREIDRVNRPDRPIPRGAIAPRGALAFSLLLFAGAIVAALALPPAAIGLAVF-NLVLLVAYTELFKGLPGVGNVVVGFLTGSTFLFGGAAVG 157
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: DGGGP_SULTO (Digeranylgeranylglyceryl phosphate synthase n=3 Tax=Sulfurisphaera TaxID=69655 RepID=DGGGP_SULTO) HSP 1 Score: 73.6 bits (179), Expect = 2.510e-12 Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 1
Query: 55 NLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLA--AGAGLAATLAPTCLTFF 558
+++AY+ L+RI NV S V G +VAS ++ K+I + + I+ G ++ND FDIE+D++NKPNRPL +G + A + + V +V + ++ A ++ +AL Y LK LV N +VA A + GGLA G+ + TL PT FF
Sbjct: 2 SVKAYFELVRIHNVIGSAISVFMGYVVASE--WKIVPIKLILAMIVVSVIAAGGYIINDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTVLALYY-YAKDLKKQGLVGNLIVALTSALSAFYGGLAFFEGSWVIRTLIPTLYIFF 168
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A2G9SU23_9CHLB (Uncharacterized protein n=1 Tax=Chlorobium sp. 445 TaxID=2033588 RepID=A0A2G9SU23_9CHLB) HSP 1 Score: 72.8 bits (177), Expect = 5.300e-12 Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 1
Query: 64 AYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAGAGLAATLAPTCLTFF 558
A+ T++R NV F + GA V S + + +PKV A++ + + V+ND D+E+DR+NKP RPL++G + A L ++ +++A+ + L I +S A+ AY+ +LK + L+ N VV+AV++ + LA G L+A P FF
Sbjct: 13 AFGTIVRPSNVVLFFLAILLGAFVTS-GISAFEEPKVWLAAISGTLVGAAANVINDVMDMEIDRINKPKRPLISGALTAQEARWYWLALSALGILTAAGISLLHLMIAI-SSTAVLYAYSAVLKHIALLGNIVVSAVVSLGLIYAALAIG-DLSALWFPVTFCFF 174
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Match: A0A410TSU7_9EURY (Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Halorubrum sp. BOL3-1 TaxID=2497325 RepID=A0A410TSU7_9EURY) HSP 1 Score: 72.4 bits (176), Expect = 6.540e-12 Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 58 LRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSLLDPKVIFTAVAAAAISVGSCVLNDWFDIELDRVNKPNRPLVTGEVMPHHALIMGLTFLSVALVSASAVHPAALQATIIASVALTSAYTPLLKPLPLVKNFVVAAVIAGAISSGGLAAG 513
LR L R+ N ++ L A GA VA S +L P + A A++ G+ + ND+FD E+D VN+P+RP+ G V P AL + + +VA+ +A + P A+ + VAL + YT L K +P + N +VA ++ GG A G
Sbjct: 5 LRGIVELARLGNCVAAGVLTATGAFVAGASGTAL--PTALAAATTVFAVAAGNAI-NDYFDREIDAVNRPDRPIPRGAVSPRGALATAVVWFAVAVAAAVPLPPLAIGIAAVNLVALVT-YTSLFKGMPGLGNALVAYLVGSTFLFGGAAVG 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4393.11135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4393.11135.1 >prot_H-paniculata_contig4393.11135.1 ID=prot_H-paniculata_contig4393.11135.1|Name=mRNA_H-paniculata_contig4393.11135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp MPAAMMADDATSPREPNLRAYWTLLRIQNVPSSFGLVAAGALVASHSMQSback to top mRNA from alignment at H-paniculata_contig4393:9512..15597+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4393.11135.1 ID=mRNA_H-paniculata_contig4393.11135.1|Name=mRNA_H-paniculata_contig4393.11135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6086bp|location=Sequence derived from alignment at H-paniculata_contig4393:9512..15597+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4393:9512..15597+ >mRNA_H-paniculata_contig4393.11135.1 ID=mRNA_H-paniculata_contig4393.11135.1|Name=mRNA_H-paniculata_contig4393.11135.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig4393:9512..15597+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |