prot_H-paniculata_contig1173.1110.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1173.1110.1
Unique Nameprot_H-paniculata_contig1173.1110.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A8D1EEP9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1EEP9_PIG)

HSP 1 Score: 132 bits (331), Expect = 4.610e-35
Identity = 67/132 (50.76%), Postives = 84/132 (63.64%), Query Frame = 0
Query:    1 VWDVASGQCVHTLRGHNDEILDVSFNATGSKLVTASADGTSRVFNTVNGACQAILIGHEGEISKVLNRVVVPRLLASTCFNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITG 132
            +WD  + +CV TL  H+DEILD  F+ TG  + TASAD    V++  +  C+  +IGH+                    FNPQG R+LT S+DK AR+WDA TG CLQ+LEGHTDEIFSCAFNY+GD IITG
Sbjct:  171 LWDATNEKCVATLTCHDDEILDSCFDYTGKLIATASAD----VYSPTHRLCRDPVIGHD------------------ISFNPQGNRLLTGSADKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 280          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A2G9RJ73_LITCT (Uncharacterized protein (Fragment) n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RJ73_LITCT)

HSP 1 Score: 98.6 bits (244), Expect = 4.900e-23
Identity = 51/83 (61.45%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   55 LIGHEGEISKVLNR----VVVPRLLASTC---FNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTII 130
            LIGH GEIS         ++    +  TC   FN QG+RILTASSDK A LWD  TG C+Q+LEGHTDEIFSCAFNYEG+TII
Sbjct:  124 LIGHRGEISSAQFNWDCSLIATASMDKTCRICFNAQGSRILTASSDKTACLWDPQTGQCVQVLEGHTDEIFSCAFNYEGNTII 206          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A643C2B2_BALPH (Uncharacterized protein (Fragment) n=1 Tax=Balaenoptera physalus TaxID=9770 RepID=A0A643C2B2_BALPH)

HSP 1 Score: 97.1 bits (240), Expect = 1.270e-22
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0
Query:   80 FNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITG 132
            FNPQG R+LT SSDK AR+WD  TG CLQ+LEGHTDEIFSCAFNY+GD IITG
Sbjct:   80 FNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 132          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A3R7BAZ2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BAZ2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.690e-22
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 0
Query:    1 VWDVASGQC--------VHTLR----------GHNDEILDVSFNATGSKLVTASADGTSRVFNTVNGACQAILIGHEGEISK-VLNRVVVPRLLASTCFNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITGA 133
            VWD  +G C        +H  R          GH  E++ V FNA+GS++ + S D T+ V++   G  +  L GH  E++    +       +A+  F+ QG R+++A +D  +R+W A TG+CLQ+L GH D++F+  F Y+G T++T +
Sbjct:  162 VWDTTTGMCKQVLTGRIIHRRRHQVGFLKSVLGHEGEVVSVGFNASGSRVGSCSMDCTATVWDVETGKAEFDLTGHAAEVACFAFDGSKSSSFMATVAFSRQGGRLVSAGADHTSRVWHAQTGECLQVLRGHEDQVFAAHFAYDGATVVTAS 313          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A5N4E733_CAMDR (Dynein assembly factor with WDR repeat domains 1 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4E733_CAMDR)

HSP 1 Score: 99.8 bits (247), Expect = 5.820e-22
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0
Query:   80 FNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITGAL 134
            FNPQG+R+LT SSDK AR+WDA TG CLQ+LEGHTDEIFSCAFNY+GD IITG +
Sbjct:  376 FNPQGSRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGTI 430          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A8C8D1H4_ONCTS (Uncharacterized protein n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8D1H4_ONCTS)

HSP 1 Score: 97.1 bits (240), Expect = 8.430e-22
Identity = 65/151 (43.05%), Postives = 79/151 (52.32%), Query Frame = 0
Query:    1 VWDVASGQCVHTLRGHNDEILDVSFNATGSKLVTASADGTSRV--------------------FNTVNGACQAI-LIGHEGEISKVLNRVVVPRLLASTCFNPQG-TRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTI 129
            +WDV SG+ VHTL GH  EI  V F+   S L+T S D +SRV                      + +G    I L GHEGEI                    QG +R+L+AS+D +ARLWD  +G  LQ+ EGHTDEIFS AFNYEGDTI
Sbjct:  140 LWDVPSGRRVHTLIGHRGEISSVQFDWDCSLLITGSMDKSSRVTXXXXXXXXXXXXXXXXXXXXXSADGRTTEIQLEGHEGEI--------------------QGESRVLSASADMMARLWDVQSGVYLQVPEGHTDEIFSSAFNYEGDTI 270          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A8D1K9R8_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1K9R8_PIG)

HSP 1 Score: 97.4 bits (241), Expect = 3.740e-21
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0
Query:   80 FNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITG 132
            FNPQG R+LT S+DK AR+WDA TG CLQ+LEGHTDEIFSCAFNY+GD IITG
Sbjct:  351 FNPQGNRLLTGSADKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 403          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A2P4TGK6_BAMTH (Uncharacterized protein n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4TGK6_BAMTH)

HSP 1 Score: 88.6 bits (218), Expect = 6.150e-19
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0
Query:   84 GTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITGALTL 136
            G RILTASSDK ARLWDA TG CLQ LEGHTDEIFSCAFNY+G+ IITG+ ++
Sbjct:  153 GNRILTASSDKTARLWDAATGHCLQTLEGHTDEIFSCAFNYKGNIIITGSWSI 205          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A674C646_SALTR (Uncharacterized protein n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674C646_SALTR)

HSP 1 Score: 87.8 bits (216), Expect = 9.230e-19
Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 0
Query:    2 WDVASGQCVHTLRGHNDEILDVSFNATGSKLVTASADGTSRVFNTVNGACQAILIGHEGEISKVLNRVVVPRLLASTCFNPQGTRILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTI 129
            WDV +G+ V    GH+ EI+ +SFN  G +LVT S D T  +++  +G  Q        + S+V                     IL++ +D++ARLWD  +G  LQ+LEGHTDEIFS AFNYEGDTI
Sbjct:  112 WDVQTGEEV----GHSAEIISLSFNTVGDQLVTGSFDHTVSLWDVPSGRSQ-----RGDQHSRV---------------------ILSSRADRMARLWDVQSGVYLQVLEGHTDEIFSYAFNYEGDTI 209          
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Match: A0A8C9KXN0_SERCA (Dynein assembly factor with WD repeats 1 n=15 Tax=Passeriformes TaxID=9126 RepID=A0A8C9KXN0_SERCA)

HSP 1 Score: 88.2 bits (217), Expect = 6.640e-18
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0
Query:   87 ILTASSDKIARLWDADTGDCLQILEGHTDEIFSCAFNYEGDTIITGA 133
            ILTASSDK ARLWDA TG CLQILEGH DEIFSCAFNY+GDTIITG+
Sbjct:  341 ILTASSDKTARLWDAATGHCLQILEGHADEIFSCAFNYKGDTIITGS 387          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1173.1110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1EEP9_PIG4.610e-3550.76Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
A0A2G9RJ73_LITCT4.900e-2361.45Uncharacterized protein (Fragment) n=1 Tax=Lithoba... [more]
A0A643C2B2_BALPH1.270e-2279.25Uncharacterized protein (Fragment) n=1 Tax=Balaeno... [more]
A0A3R7BAZ2_9STRA4.690e-2232.89Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A5N4E733_CAMDR5.820e-2278.18Dynein assembly factor with WDR repeat domains 1 n... [more]
A0A8C8D1H4_ONCTS8.430e-2243.05Uncharacterized protein n=1 Tax=Oncorhynchus tshaw... [more]
A0A8D1K9R8_PIG3.740e-2179.25Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9... [more]
A0A2P4TGK6_BAMTH6.150e-1977.36Uncharacterized protein n=1 Tax=Bambusicola thorac... [more]
A0A674C646_SALTR9.230e-1941.41Uncharacterized protein n=1 Tax=Salmo trutta TaxID... [more]
A0A8C9KXN0_SERCA6.640e-1887.23Dynein assembly factor with WD repeats 1 n=15 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 103..136
e-value: 23.0
score: 8.4
coord: 6..45
e-value: 1.4E-9
score: 47.8
coord: 48..100
e-value: 0.033
score: 23.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 104..132
e-value: 0.0078
score: 17.1
coord: 7..45
e-value: 2.8E-7
score: 31.1
coord: 49..100
e-value: 3.7E-4
score: 21.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 13..54
score: 11.611
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 80..109
score: 10.642
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..73
e-value: 7.0E-19
score: 69.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 74..134
e-value: 1.3E-17
score: 66.0
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR44156:SF1DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1coord: 1..133
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 87..101
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..136
score: 23.097
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1173contigH-paniculata_contig1173:17337..18267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1173.1110.1mRNA_H-paniculata_contig1173.1110.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1173 17337..18267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1173.1110.1 ID=prot_H-paniculata_contig1173.1110.1|Name=mRNA_H-paniculata_contig1173.1110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
VWDVASGQCVHTLRGHNDEILDVSFNATGSKLVTASADGTSRVFNTVNGA
CQAILIGHEGEISKVLNRVVVPRLLASTCFNPQGTRILTASSDKIARLWD
ADTGDCLQILEGHTDEIFSCAFNYEGDTIITGALTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf