prot_H-paniculata_contig4375.11104.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4375.11104.1
Unique Nameprot_H-paniculata_contig4375.11104.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length181
Homology
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 7.950e-36
Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 0
Query:    2 ALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMG-----------------------IVEAQEAKRHDVLR---HRNARRARSCERA-------GDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            AL     F+VA S W+ GT ER+MRE+V T++A+L ER+  L +++ ++P VQWALNT++R    +T + +M G  PR  F+ +                        +++ Q      + +   H  AR+  +  R        GD+V++ARVR+SG   KL S WTGPW V+S    HVY VQ++V+G+ RD HV R+ FYA
Sbjct:  128 ALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYA 331          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.970e-34
Identity = 76/204 (37.25%), Postives = 112/204 (54.90%), Query Frame = 0
Query:    2 ALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMG-----------------------IVEAQEAKRHDVLR---HRNARRARSCERA-------GDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            AL     F+VA S W+ GT ER+MREIV T++A+L ER+  + +++ ++P VQWALNT++R    +T + +M G  PR  F+ +                        +++ Q      V +   H  AR+  +  R        GD+V++ARVR+SG   KL S WTGPW V+S    HVY VQ++V+G+ RD HV R+ FYA
Sbjct: 1351 ALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYA 1554          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.220e-22
Identity = 63/182 (34.62%), Postives = 99/182 (54.40%), Query Frame = 0
Query:    2 ALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMGIVEAQEAKRHDVLRHRNAR----RARSCERAGDFVLMARVRKSGPRAKLVSRW-------TGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            AL    +FSVA S W+ GT ER+MRE+V TL+AM+ E +    +++ ++P VQWALNT++R    +T + +M G  PR   + +      E K  DVL  ++ R         +R     ++ +V+ S  + +  +R         G + +++    HVY VQ++VSGE RD HV R+ FYA
Sbjct: 1453 ALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWK-VDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYA 1633          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: V9G136_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9G136_PHYPR)

HSP 1 Score: 95.5 bits (236), Expect = 1.420e-19
Identity = 71/185 (38.38%), Postives = 99/185 (53.51%), Query Frame = 0
Query:    2 ALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSID-TTQFTLMHGM-----------EPRRGFAAMGIVEAQEAKRHDVLRHRNARRARSCERAGDFVLMARVRKSGPRAKLVSRWTGPWGVI--SDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            AL  HHHF+ A   W  GTVE VMRE++ ++RA+L E +    ++  V+  VQ  LN S   S+     FT M G+           E      A+G   AQ   R   L+ R A+ A+     GDFVL A V  S  R+KL  +W GP  V+  S NW  V+TV++L++GET+++H  R+ FYA
Sbjct:  608 ALGAHHHFTTARCPWANGTVEVVMREVLRSVRALLSEWRLAETDWPKVIKIVQLVLNQSVSDSLGGVAPFTAMTGLSAMNPLDPVALEELHKRVAIGRSAAQRKGRAKALK-RGAKMAQFA--IGDFVLYADV-WSHRRSKLRVKWCGPARVVETSSNW--VFTVENLLTGETKESHAARLKFYA 786          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A2P4WXA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXA7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.440e-16
Identity = 65/182 (35.71%), Postives = 97/182 (53.30%), Query Frame = 0
Query:    2 ALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRR---GFAAMGIVE-----AQEAKRHDVLRHRNARRARSCERA-GDFVLMARVRKSGPRAKLVSRWTGPWGVI--SDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            AL  HHHF+ A   W  GTVE VMRE++   RA+L E +    E+  V+  VQ  LN S   S++        G+ P R   G AAM  V+     + ++ R+      + R A+  + A GD+VL A V  S   +KL  +W GP  V+  + NW  V+T+++L++ ETR+ H  R+ F+A
Sbjct: 1218 ALGAHHHFTTARCPWANGTVEVVMREVLRCCRALLSEWRLAEAEWPRVIKIVQLVLNQSPSASLE--------GVAPVRAMTGIAAMNPVDPIITPSGQSARNKARTKSSKRGAKMAQFAIGDYVLYADV-WSHRHSKLRVKWCGPARVVDTASNW--VFTIENLLTRETREVHASRLKFFA 1388          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A225VYH6_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VYH6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.210e-15
Identity = 58/175 (33.14%), Postives = 91/175 (52.00%), Query Frame = 0
Query:    3 LSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQ----FTLMHGMEPRRGFAAMGIVEAQEAKRHDVLRHRNARRARSCE-RAGDFVLMARV-RKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFY 171
            L +H  F++A S W  G+VERV R+++  LRAM+++ +    +++ ++P VQ ++N +  PS+  T     FT +    P     AM    A +  +  +L  +  R   +     GD+VL +RV  K G   KL+  W GP+ VI  +  H + V HLVSG   D H  R+ FY
Sbjct: 1094 LKSHQIFTIAYSPWINGSVERVNRDVLQVLRAMILDYKISTKDWVYLVPLVQSSINHTAVPSLGNTAPIELFTGLPCPTPLADLRAMHQPVADQRLKQRLLNKKKERGENTVNFDVGDYVLRSRVDEKKGN--KLLVTWQGPYKVIRAD-PHSFRVSHLVSGNELDVHPSRLKFY 1265          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A225ULL8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225ULL8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.990e-14
Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 0
Query:    5 THHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALN-TSWRPSIDTTQFTLMHGMEPRRGFAAMGIVEAQEAKRHDVLRHR-NARRARSCE-RAGDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            T   F+VA   W  G+VER+ R+I+  LR M++E +    ++  +LP VQ  LN T+ +   + +   +  G+E  R      IV  ++AK     R++ N R +       GD+VL +R+      +KL  +W GP+ V+       +TV+HL+SG +RD H  R+  YA
Sbjct:   31 TQQDFTVAYCPWINGSVERINRDILQVLRVMVLEFRLRQEQWADLLPLVQANLNQTAVQSLANLSPIEVFTGLE--RPSPLRRIVVTRDAKDKQTQRNKCNQRVSHPVNFHVGDYVLWSRIESRLKTSKLSLKWVGPYRVVEAKTNS-FTVEHLISGSSRDVHASRLKHYA 198          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.260e-14
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    2 ALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAM 85
            AL     F+VA S W+ GT ER+MREIV T++A+L ER+  + +++ ++P VQWALNT++R    +T + +M G  PR  F+ +
Sbjct:  575 ALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTL 658          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.560e-14
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 0
Query:  114 GDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 172
            GD+V++ARVR+SG   KL S WTGPW V+S    HVY VQ++V+G+ RD HV R+ FYA
Sbjct:   18 GDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYA 76          
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A225VRY4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VRY4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.570e-13
Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 0
Query:    3 LSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQ----FTLMHGMEPRRGFAAMGIVEA-QEAKRHDVLRHRNARRARSCERAGDFVLMARVR-KSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYAHN 174
            L T   F+ A   W  G++ERV R+I+  LRAM++E +    ++I ++P VQ +LN +  PS+ +      FT +    P + F + G  E  Q     D +   N          GD+VL +RV  K G   KL   WTGP  V+  +  H + V+HLV+G+  D H  R+ FYA N
Sbjct:  440 LKTQQQFTPAYCPWINGSIERVNRDILQVLRAMILEYKISTRDWIYLIPMVQSSLNHTPVPSLASKAPVELFTGLPCPSPLQSFYSHGKKEILQIPDDADKIEGENVVNFD----VGDYVLRSRVDDKQGN--KLHVTWTGPHIVVRAD-AHSFRVRHLVTGDESDVHASRLKFYADN 610          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE7.950e-3636.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE1.970e-3437.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE3.220e-2234.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
V9G136_PHYPR1.420e-1938.38Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A2P4WXA7_9STRA8.440e-1635.71Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A225VYH6_9STRA7.210e-1533.14RNA-directed DNA polymerase n=1 Tax=Phytophthora m... [more]
A0A225ULL8_9STRA1.990e-1432.16Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6H5JCX8_9PHAE2.260e-1442.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAI3_9PHAE3.560e-1457.63Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A225VRY4_9STRA3.570e-1334.27Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..111
e-value: 1.4E-14
score: 55.7
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4375contigH-paniculata_contig4375:12660..13271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4375.11104.1mRNA_H-paniculata_contig4375.11104.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4375 12159..13271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4375.11104.1 ID=prot_H-paniculata_contig4375.11104.1|Name=mRNA_H-paniculata_contig4375.11104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
MALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVL
PPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMGIVEAQEAKRHDVLR
HRNARRARSCERAGDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVY
TVQHLVSGETRDAHVVRMGFYAHNIPAGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf