mRNA_H-paniculata_contig4375.11104.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.280e-88 Identity = 153/374 (40.91%), Postives = 217/374 (58.02%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEV--ASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMG-----------------------IVEAQEAKRHDVLR---HRNARRARSCERA-------GDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 1017
+W+P + ++ +RL++ HM +AGHRGV AT++RL YC W+ M+ D ++QCL+C D K+G VPRP TVHGK G+V++FD+LH G+S A +D DGY Y+LV+ DD S F W+ P TA TA L C G P WVSD HFKN V+ +E AL F+VA S W+ GT ER+MREIV T++A+L ER+ + +++ ++P VQWALNT++R +T + +M G PR F+ + +++ Q V + H AR+ + R GD+V++ARVR+SG KL S WTGPW V+S HVY VQ++V+G+ RD HV R+ FYA
Sbjct: 1181 LWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYA 1554
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE) HSP 1 Score: 251 bits (641), Expect = 8.480e-77 Identity = 133/331 (40.18%), Postives = 186/331 (56.19%), Query Frame = 1
Query: 130 MEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEV--ASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMG-----------------------IVEAQEAKRHDVLR---HRNARRARSCERA-------GDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 1017
M+ D ++QCL+C D K+G VPRP TVHGK G+V++FD+LH G+S A +D DGY Y+LV+ DD S F W+ P TA TA L C G P WVSD HFKN V+ +E AL F+VA S W+ GT ER+MRE+V T++A+L ER+ L +++ ++P VQWALNT++R +T + +M G PR F+ + +++ Q + + H AR+ + R GD+V++ARVR+SG KL S WTGPW V+S HVY VQ++V+G+ RD HV R+ FYA
Sbjct: 1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYA 331
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 257 bits (657), Expect = 1.870e-73 Identity = 140/352 (39.77%), Postives = 201/352 (57.10%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASV--VDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAMGIVEAQEAKRHDVLRHRNAR----RARSCERAGDFVLMARVRKSGPRAKLVSRW-------TGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 1017
+W+P L VRL++ HM +AGHRG ATL RLS YC W ME ++QCL+C D K G VPRPL TVHG G+VV+FD+L+ G S +D +G++Y+LV+ DD S ++WL P A TA TA L C + G P WVSD +HFKN ++ +E AL +FSVA S W+ GT ER+MRE+V TL+AM+ E + +++ ++P VQWALNT++R +T + +M G PR + + E K DVL ++ R +R ++ +V+ S + + +R G + +++ HVY VQ++VSGE RD HV R+ FYA
Sbjct: 1283 LWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWK-VDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYA 1633
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE) HSP 1 Score: 243 bits (620), Expect = 9.050e-71 Identity = 113/254 (44.49%), Postives = 161/254 (63.39%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEV--ASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRRGFAAM 756
+W+P + ++ +RL++ HM +AGHRGV AT++RL YC W+ M+ D ++QCL+C D K+G VPRP TVHGK G+V++FD+LH G+S A +D DGY Y+LV+ DD S F W+ P TA TA L C G P WVSD HFKN V+ +E AL F+VA S W+ GT ER+MREIV T++A+L ER+ + +++ ++P VQWALNT++R +T + +M G PR F+ +
Sbjct: 405 LWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTL 658
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.560e-58 Identity = 120/345 (34.78%), Postives = 177/345 (51.30%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSID----TTQFTLMHGMEPRRGFAAMGIVEAQEAKRHDVLRHRNARRARSCER--AGDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYA 1017
IW+P EL +R+ I H G AGHR DAT + ++ W ++AD + CL+CA G PRPL +H +V+++D+L+ G+S+ YVLV++DD S F+WL+P A TA+ T L +G R WVSD HFKN+V+ ++ AL HHHF+ A W GTVE V RE++ RA+L E + E+ V+ VQ LN S +ID T T + M P A ++ +H N ++ + + GDFVL A V + RAKL +W GP V + ++ +++L++GE R+ H R+ FYA
Sbjct: 48 IWIPDEVSELQLRICIVGHFGAAGHRATDATFSAIAAKFHWKGLKADVDYFVGHCLHCASSTGGPPQPRPLGEAIHADKPNEVIHWDYLYMGKSD--------SDLEYVLVIKDDASKFVWLMPTDAATADNTFECLMTWFASFGVVRWWVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKIVQMVLNHSPCSAIDGVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHA-RAKLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYA 383
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: V9G136_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9G136_PHYPR) HSP 1 Score: 206 bits (525), Expect = 1.780e-56 Identity = 129/353 (36.54%), Postives = 191/353 (54.11%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSID-TTQFTLMHGM-----------EPRRGFAAMGIVEAQEAKRHDVLRHRNARRARSCERAGDFVLMARVRKSGPRAKLVSRWTGPWGVI--SDNWGHVYTVQHLVSGETRDAHVVRMGFYA 1017
IW+P + + LH+R+ + H G AGHR + ATL ++ WT + AD + +CL+CA G PRPL +H + +++++D L G + TGD + VLV++D S ++WL P +A TA+ T L + ++G WVSD HFKN V+ ++ AL HHHF+ A W GTVE VMRE++ ++RA+L E + ++ V+ VQ LN S S+ FT M G+ E A+G AQ R L+ R A+ A+ GDFVL A V S R+KL +W GP V+ S NW V+TV++L++GET+++H R+ FYA
Sbjct: 448 IWLPDAANALHLRICLVGHFGAAGHRTMKATLQAIADKFTWTDLTADVTRFVGRCLHCASVTGGPPTPRPLGEALHAEKPNELIHWDILTMGPAT------TGDAF--VLVIKDHASHYVWLTPTRAATADLTFESLMEWFAVFGVCPAWVSDQDTHFKNAVIADLQRALGAHHHFTTARCPWANGTVEVVMREVLRSVRALLSEWRLAETDWPKVIKIVQLVLNQSVSDSLGGVAPFTAMTGLSAMNPLDPVALEELHKRVAIGRSAAQRKGRAKALK-RGAKMAQFA--IGDFVLYADV-WSHRRSKLRVKWCGPARVVETSSNW--VFTVENLLTGETKESHAARLKFYA 786
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A080ZI93_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A080ZI93_PHYPR) HSP 1 Score: 194 bits (492), Expect = 1.900e-51 Identity = 120/351 (34.19%), Postives = 178/351 (50.71%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSID----TTQFTLMHGMEPRRGFAAMGIVEAQEAKRHDVLRHRNARRARSCERAGDF---VLMARVRK---SGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSGETRDAHVVRMGFYAHN 1023
IW+P EL +R+ + H G AGHR D T + S W +++ D +R+CL+CA G + RPL VH +V+++D+L+ G+S+ +YVLV++DD S F+WL+P A TA+ T L +G R WVSD HFKN+V+ ++ A+ +HHHF+ A W GTVE V REI+ RA+L E + ++ V+ VQ LN S +ID T T + M P A + Q A +++ R R+ AR D A +K S KL +W GP V + ++ +++LV+GE R+AH R+ FYA N
Sbjct: 1097 IWIPEKMSELQLRICVVGHFGVAGHRASDVTFSANSAKFYWKSLKEDVVFFVRRCLHCASSTGGPPLSRPLGEAVHADKPNEVIHWDYLYMGKSD--------SDLQYVLVIKDDASKFVWLMPTDAATADNTFDFLMDWFACFGVCRFWVSDQGTHFKNKVIEDMQHAMGSHHHFTTARCPWANGTVEVVNREILRCCRALLFEWRLQPTDWPRVIKIVQMVLNHSPCSAIDGVAPVTAMTGLRAMNPTDPIAVPEPI--QVATLNEIKRSRSENIARLQAALADMHKHTAKANKKKRAASKKHPKLRVKWCGPAQVTAATSNWIFEIENLVTGERREAHASRLKFYADN 1437
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A2P4WXA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXA7_9STRA) HSP 1 Score: 177 bits (449), Expect = 9.800e-46 Identity = 116/350 (33.14%), Postives = 178/350 (50.86%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSIDTTQFTLMHGMEPRR---GFAAMGIVE-----AQEAKRHDVLRHRNARRARSCERA-GDFVLMARVRKSGPRAKLVSRWTGPWGVI--SDNWGHVYTVQHLVSGETRDAHVVRMGFYA 1017
+W+PA EL +R+ I H G AGHR + TL ++ VW+ + +D + +CL+CA G PRPL +H + +++++D+L G+S G +YVLV++DD S ++WL WVSD HFKN V+ ++ AL HHHF+ A W GTVE VMRE++ RA+L E + E+ V+ VQ LN S S++ G+ P R G AAM V+ + ++ R+ + R A+ + A GD+VL A V S +KL +W GP V+ + NW V+T+++L++ ETR+ H R+ F+A
Sbjct: 1085 VWLPADASELQLRICIVGHFGAAGHRTAEVTLKNIASVFVWSDLVSDVKQFVARCLHCASVSGGPPFPRPLGEALHAERPNELLHWDYLSMGDST--------KGEKYVLVLKDDASNYVWL---------------------------WVSDQGTHFKNAVIQALQRALGAHHHFTTARCPWANGTVEVVMREVLRCCRALLSEWRLAEAEWPRVIKIVQLVLNQSPSASLE--------GVAPVRAMTGIAAMNPVDPIITPSGQSARNKARTKSSKRGAKMAQFAIGDYVLYADV-WSHRHSKLRVKWCGPARVVDTASNW--VFTIENLLTRETREVHASRLKFFA 1388
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.710e-44 Identity = 117/360 (32.50%), Postives = 176/360 (48.89%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSID----TTQFTLMHGMEPRRGFA---------AMGIVEAQEAKRHDVLRHRNARRARSCER--------AGDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSG-ETRDAHVVRMGFY 1014
IWVP + +L RL + H G AGHRG+D T + W + + D A ++ C++C G VPRP + +H + ++++FD+L E++ +G++YVLVV+DD SGF L P+ A TA L YG TWVSD +HFKN V+ K++ + HHH + S W GTVE V R I+ ++ +L E + ++E+ VLP VQ ALN + T FT + P G A+G++ + A+ + R + AR AR +R GDFVL+ ++ + P KL W GP+ V ++ V+ LV T H R+ Y
Sbjct: 621 IWVPDAAVDLQQRLCVVAHQGAAGHRGIDVTTKGVMDLFTWKSAKEDIEAFVKGCIHCLCVD-GVVVPRPWGSALHAEKPNELIHFDWLQLPEAK--------NGWKYVLVVKDDMSGFCRLYPSSTADAEKTAEALMDWFTTYGNVTTWVSDGGSHFKNEVVAKIQKLIGAHHHITTPHSPWANGTVEVVNRLILRCMKTLLSEMRLRIDEWFRVLPLVQGALNHQPADRLGGIAPITAFTGLPTKPPLTGLRKKYVAELCHALGVLHREVAETSEK-RRKQARDAREQKRNVKVAKFAPGDFVLVGKIVQY-PN-KLALNWRGPFRVARMLADYLMEVEQLVEPFATSVHHACRLKLY 968
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Match: A0A6G0X120_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X120_9STRA) HSP 1 Score: 165 bits (418), Expect = 7.980e-43 Identity = 119/376 (31.65%), Postives = 176/376 (46.81%), Query Frame = 1
Query: 1 IWVPASTHELHVRLLIFVHMGKAGHRGVDATLNRLSPYCVWTAMEADAAAVIRQCLYCADYKTGATVPRPLAATVHGKAVGDVVNFDFLHAGESEVASVVDTGDGYRYVLVVEDDFSGFLWLVPAKAGTANFTAGELTK*CILYGPPRTWVSDNTAHFKNRVLHKVEMALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLPPVQWALNTSWRPSID----TTQFTLMHGMEPRRGFA-----AMGIVEAQEAKRH----------DVL----------RHRNARRARSCER--------AGDFVLMARVRKSGPRAKLVSRWTGPWGVISDNWGHVYTVQHLVSG-ETRDAHVVRMGFY 1014
IWVP + +L RL + H G AGHRG+D T + W + + D A ++ C++C G VPRP + +H + ++++FD+L E++ +G++YVLVV+DD SGF L P+ A TA L YG TWVSD +HFKN V+ K++ + HHH + S W GTVE V R I+ ++ +L E + ++E+ VLP VQ ALN + T FT + P G + ++ + KR DVL R + AR AR +R GDFVL+ ++ + P KL W GP+ V ++ V+ LV T H R+ Y
Sbjct: 96 IWVPDAAVDLQQRLCVVAHQGAAGHRGIDVTTKGVMDLFTWKSAKEDIEAFVKGCIHCLCVD-GVVVPRPWGSALHAEKPNELIHFDWLQLPEAK--------NGWKYVLVVKDDMSGFCRLYPSSTADAEKTAEALMDWFTTYGNVTTWVSDGGSHFKNEVVAKIQKLIGAHHHITTPHSPWANGTVEVVNRLILRCMKTLLSEMRLRIDEWFRVLPLVQGALNHQPADRLGGIAPITAFTGLPAKPPLTGLVHPKTKKVHSIDWMDDKRKKYVAELCHALDVLHREVAETSEKRRKQARDAREQKRNVKVAKFAPGDFVLVGKIVQY-PN-KLALNWRGPFRVARMLADYLMEVEQLVEPFATSVHHACRLKLY 460 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4375.11104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4375.11104.1 >prot_H-paniculata_contig4375.11104.1 ID=prot_H-paniculata_contig4375.11104.1|Name=mRNA_H-paniculata_contig4375.11104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp MALSTHHHFSVAESAWTTGTVERVMREIVGTLRAMLVERQEPLNEYISVLback to top mRNA from alignment at H-paniculata_contig4375:12159..13271+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4375.11104.1 ID=mRNA_H-paniculata_contig4375.11104.1|Name=mRNA_H-paniculata_contig4375.11104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1113bp|location=Sequence derived from alignment at H-paniculata_contig4375:12159..13271+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4375:12159..13271+ >mRNA_H-paniculata_contig4375.11104.1 ID=mRNA_H-paniculata_contig4375.11104.1|Name=mRNA_H-paniculata_contig4375.11104.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig4375:12159..13271+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |