prot_H-paniculata_contig43739.11102.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig43739.11102.1 vs. uniprot
Match: A0A2K3KMU5_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KMU5_TRIPR) HSP 1 Score: 52.0 bits (123), Expect = 3.730e-6 Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 0
Query: 1 WIIDSGCTGHHLTPQRNLFQIFRQVVCSPIATASKGELDVEGQGDVEGLIWTAEGAMRIIVCDVFYVPEASDSILSVERMVSQGMEAYLVRN 92
W ++SGC+ +H+TP R F S I +L VEG G++ +I + +G ++I+ DVF+VPE S ++LS+ ++V +G + N
Sbjct: 15 WYLNSGCS-NHMTPYREWLTSFDASKKSSIKLVDGRKLVVEGIGNI--VIKSKKGG-KVIISDVFFVPEMSCNLLSLGQLVQKGFSVNMEDN 102
BLAST of mRNA_H-paniculata_contig43739.11102.1 vs. uniprot
Match: A0A438GVH9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GVH9_VITVI) HSP 1 Score: 50.4 bits (119), Expect = 4.780e-5 Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 0
Query: 1 WIIDSGCTGHHLTPQRNLFQIFRQVVCSPIATASKGELDVEGQGDVEGLIWTAEGAMRIIVCDVFYVPEASDSILSVERMVSQGMEAY 88
W+IDSGCT +H+TP+ + F+ Q S + + +DV+G+G V + T I+ DV +VPE S S+LSV +M+ + +
Sbjct: 291 WLIDSGCT-NHMTPELSYFKELDQSYKSKVKIGNGDLVDVKGKGVVS--VETPTCIKYIL--DVLFVPEISQSLLSVGQMLEKNYSLH 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43739.11102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig43739.11102.1 ID=prot_H-paniculata_contig43739.11102.1|Name=mRNA_H-paniculata_contig43739.11102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bpback to top |