prot_H-paniculata_contig43645.11091.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43645.11091.1
Unique Nameprot_H-paniculata_contig43645.11091.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43645.11091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 2..75
e-value: 2.1E-11
score: 43.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..88
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..89
e-value: 6.7E-17
score: 63.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43645contigH-paniculata_contig43645:297..1068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43645.11091.1mRNA_H-paniculata_contig43645.11091.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43645 297..1069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43645.11091.1 ID=prot_H-paniculata_contig43645.11091.1|Name=mRNA_H-paniculata_contig43645.11091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
IAVTLHEVAQCVREVDGPEKAERYFRRALKIEQTKLGTRDIQVADTLHRL
GQCIRESRRPKEADVYLRRSLDIKTEKLDKNDLRTAMTL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf