prot_H-paniculata_contig43586.11081.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig43586.11081.1
Unique Nameprot_H-paniculata_contig43586.11081.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length401
Homology
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.520e-78
Identity = 163/426 (38.26%), Postives = 233/426 (54.69%), Query Frame = 0
Query:    2 EEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCK---SLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIA-GRREKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQK------------SLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 398
            E E+ +L KN TWE   L R   GRKAI +KW+FK K    G + RY+ RLVA+GF Q  G DF ET  PV + +++R + S AA++   L  MDV  A+LN   EEE+++K    F     D  +   +CK   +LYGLKQS R WN T+D+F+  +G  +  TD C+Y  RDD  +  + V +YVDDL++A    + +   K   S+RF M DLG L   LG++V  D  +G +++ Q  ++ +   K   Q              L   + + G +  ++ +G       YR  VG+++Y   GTRPD+A AV   ++   DPC  ++   KR+ R L   P  GI+  G  +G  L G+ DADWA DIE R+ST+GYVF LN   +TW          SSTEAEY+A  EA +E V+L+  +
Sbjct:   14 ESEFESLCKNKTWELVPLPR---GRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFV----DAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQG-----VPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFM 424          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 257 bits (657), Expect = 1.270e-75
Identity = 155/417 (37.17%), Postives = 245/417 (58.75%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRRE-KVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLS-DIGAQVQESSR-GRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELLGSI 401
            ME+E  +L  N  W   +L  L   RKA+ +KW+F+ K   +G++  ++ RLVAQGFSQ  G+D+ ET  PV R  ++RTV + AA+H  +L  MDV  A+LN   +EE+++K +  F    ++   V RL +S+YGLKQS R WN+ LD  L  +G  ++  D C+Y   + GE    ++AVYVDD+++AG+ + K++E K   +++F+MKD+G L   LG+ V     +  I I Q +Y ++  ++   + S  A    + G ++++++   +  +   Y+  VG L+Y ST TRPD+AYAV   AR   DP +E++   KRI R L+   D G+   G        G+ DADWA D++DRKST+GYVF+++   ++W          S+ EAEY+A   A +E V+L++LL  +
Sbjct:    1 MEKEMESLKTNEVW---NLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEH-LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEI--FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDL 411          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI)

HSP 1 Score: 247 bits (630), Expect = 1.980e-74
Identity = 163/420 (38.81%), Postives = 237/420 (56.43%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAG-RREKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLSDIGAQVQESSRGRSGNSTE--------YRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 398
            M+EE  AL +N TW   DL  L  GRKAI  +W++K K   N  + RYR RLV +G++Q  G DF E    V R++T+R V +  A  D  LE +DV  A+L+   EEE+++ L PE    +     V RL KSLYGLKQ+ R W    D +++ +G  R   D C YF R  G +  +L+ +YVDD+++AG  +++V E K   ++ F MKDLG  +++LG+ V  DR N  I +SQ +Y++    + + Q S   + + +    + SS     N  E        Y   VGSL++A   TRPD+A AV   +R M +P +E++ST KRI R +    +  +  GG      L G+VD+D+A D + RKSTTGYVF L    V+W          S+TEAEY+AA +A KET++++ LL
Sbjct:    1 MQEELEALDRNKTW---DLVTLPRGRKAIGNRWVYKIKRDGNNQVERYRARLVVKGYAQKEGIDFNEIFSLVVRLNTVRVVLALCAVFDLHLEQLDVKTAFLHGDLEEEIYM-LQPEGFAETGKENLVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRSGGNDYIILL-LYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSK-PISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGSYLT--LRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKETIWIQRLL 412          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 247 bits (630), Expect = 4.840e-74
Identity = 156/417 (37.41%), Postives = 227/417 (54.44%), Query Frame = 0
Query:    9 VKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPF-SRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGR-REKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYI-------RASADKPSEQKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGH-GLEGFVDADWAEDIEDRKSTTGYVFKLN-------VTW----------SSTEAEYVAAGEAGKETVYLRELL 398
            +KNGTWE   L  L  G + I + W+   K  +NG + R + R +A+G+SQ  G D+  T  PV  ++T+R V + A   D EL+ MDV+PAYL S  EE+++VK  P +  + S     V RL KSLYGLKQSGRNW+  +D +  G G   S  D CLY       E  L++ +YVDDL+I    RE V +FKH  S+ F MKDL  L  +LG+ ++ DR    + ISQ +YI       R +  KP      G +    G  V+  +        EY  +VGSL+YA+  TRPD+A+AV+   + ++   +E++   KR+ R L    + G+K  G S G   L G+ DAD+A D ++R+ST+GY F L+       + W          SS E+E ++A  A +  +Y+R+LL
Sbjct:    1 MKNGTWE---LTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDN--------EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLL 405          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A2K3M5H6_TRIPR (Retrotransposon protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M5H6_TRIPR)

HSP 1 Score: 245 bits (625), Expect = 6.160e-73
Identity = 158/417 (37.89%), Postives = 234/417 (56.12%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRREK-VDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQ--KSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTWSS----------TEAEYVAAGEAGKETVYLRELLGSI 401
            M EE  ++VKN TW+  D   L  G++AI  KW++K K  E+GS+ +Y+ RLVA+G+SQ  G DF ET  PV RM T+RTV + AA+ + ++  +DV  A+LN   EEE++VK    F    ++   V +L K+LYGLKQ+ R WN+ +D + +  G  +S ++  LY  R+      L+V +YVDDL+ AG     V  FK    + + M DLG +   LGI V+  +  G I I+Q  YI     K   +  K +   ++ +  ++Q +      +   YR +VGSLIY  T TRPD+ ++V   +R M +P + +F+  KRI R L      GIK   K   + L G+ D+DWA   +DRKST+ YVF L    ++WSS           EAEY++A EA +E V+LR +L  +
Sbjct:    1 MNEEMRSIVKNRTWQLVD---LPTGKEAIGLKWVYKTKYNEDGSVQKYKARLVAKGYSQQPGVDFNETFAPVARMETIRTVLALAAQLELQVFQLDVKSAFLNGELEEEVYVKQPQGFEAKGKERK-VYKLHKALYGLKQAPRAWNSKIDAYFLQNGFVKSPSEPSLYVKRNGANF--LMVCLYVDDLIYAGTNPNMVQSFKEAMMKEYEMTDLGLMKYFLGIQVKQTK--GEIFITQEKYIHDLLKKFRLESCKPVSTPMA-MNEKLQLNDGAEQADPKVYRSLVGSLIYL-TNTRPDIVHSVSLVSRFMNEPSKLHFAAAKRILRYLQGTKKLGIKYV-KEEDNKLVGYTDSDWAGSFDDRKSTSAYVFCLGSKAISWSSKKQNSVALSSAEAEYISANEATREAVWLRRILSDL 406          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM)

HSP 1 Score: 255 bits (652), Expect = 2.370e-72
Identity = 155/419 (36.99%), Postives = 243/419 (58.00%), Query Frame = 0
Query:    7 ALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIP-FVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRREKV-DEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKS------------LGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 398
            +L+KN TW   D+  L  GRKAI  +W+F+ K  + G + R++ RLVA+GFSQ  G D+ ET  PV + +++R V S AA++  +L  MDV  A+LN   +E++++     +     D P  V +L +SLYGLKQS R WN T+DDF++ +G ++  +D C+Y  RD G++  + VA+YVDDLV+A   +++ +  KH  S+RF M DLG L   LG+++++D  +G +T+ Q  ++++   K   Q S            L   + + G Q +++ +     +  YR  VG+L+Y    TRPD+A AV   ++   DPC  ++   KR+ R L   P  G++   + +  G+ G+ DADWA DIE R+ST+GY F +N   ++W          SSTEAEY+A  EA +E V+L+  L
Sbjct:  681 SLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEVERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD-GQDM-IFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMK-----NVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWLKVFL 1086          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 248 bits (632), Expect = 2.680e-72
Identity = 153/415 (36.87%), Postives = 237/415 (57.11%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRR-EKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLSDIGAQ---VQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 398
            M++E  +L ++  WE   L  L   RKA+  KW+FK K   +GS+ R++ RLVAQGFSQ  G D+ ET  PV R  ++RTV + + +   +L  MDV  A+LN   E+E+++K  PE            +L KSLYGLKQS R WN+ LD+ L  +G  ++ +D C+Y   +DG     +VA++VDD+++AG+  EK+ + K + ++RF++KD+G L  +LG+ V  +  +  + I Q +Y  AS  K    ++   V + +      V         N  E++  VGSL+Y S+ TRPD+ +AV   A+   +P  E+++  KRIFR L    ++G+     +N   + GF DADWA D+ DRKST+GY F++N   V+W          S+  AEYVA   A +E +++R+LL
Sbjct:  165 MQQEMDSLQEHDVWE---LTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMK-QPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYT-ASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLL 569          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 247 bits (631), Expect = 2.770e-72
Identity = 151/417 (36.21%), Postives = 240/417 (57.55%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRRE-KVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLS-DIGAQVQESSR-GRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELLGSI 401
            ME+E  +L  N  W   +L  L   RKA+ +KW+F+ K   +G++  ++ RLVAQGFSQ  G+D+ ET  PV R  ++RTV + AA+H  +L  MDV  A+LN   +EE+++K    F    ++   V RL +S+ GLKQS R WN+ LD  L  +G  ++  D C+Y   + GE    ++AVYVDD+++AG+ + K++E K   +++F+MKD+G     LG+ V     +  I I Q +Y ++  ++   + S  A    + G ++++++   +  +   Y+  VG L+Y ST TRPD+AYAV   AR    P +E++   KRI R L+   D G+   G        G+ DADWA D++DRKST+GYVF+++   ++W          S+ EAEY+    A +E V+L++LL  +
Sbjct:  149 MEKEMESLKTNEVW---NLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEI--FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDL 559          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A7N2MM16_QUELO (Uncharacterized protein n=4 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2MM16_QUELO)

HSP 1 Score: 255 bits (651), Expect = 5.430e-72
Identity = 161/417 (38.61%), Postives = 233/417 (55.88%), Query Frame = 0
Query:    1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAG-RREKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADK--PSEQKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTWSS----------TEAEYVAAGEAGKETVYLRELLGSI 401
            M+EE  ++ KN TWE  D   L  GR  I  KWI+K K  E+GS+ +++ RLVA+G+SQ  G DF ET  PV RM T+RT  + AA+ + E+  +DV  A+LN   EEE++V+    +    ++   V RLCK+LYGLKQ+ R WN+ +D +    G +RSI +  LY  R+ G    L++ +YVDDL+  G  R+ V++FK    + F M DLG +   LG  VR     G + I Q  YI     K   +  K +   +S    ++Q+       ++  YR +VGSLIY  T TRPD+ ++V   +R M  P + +++  KR+ R L      GI    K NG+ L GF D+DWA  ++DRKST+GY+F L    + WSS           EAEY+AA +A  E ++LR LL  +
Sbjct:  872 MDEEIASIEKNQTWELVD---LPNGRDVIGLKWIYKTKYNEDGSIQKHKARLVAKGYSQQPGVDFHETFAPVVRMETIRTFLALAAQMELEVFQLDVKSAFLNGDLEEEVYVEQPKGYMKKGKEDK-VYRLCKALYGLKQAPRAWNSKIDGYFRQNGFQRSICEPSLYVKRE-GTRDFLVICLYVDDLIYMGTNRKMVEDFKKAMMKEFEMTDLGLMKYFLGFQVRQS--TGEVFICQEKYIEDLLKKFHMAACKPVSTPMSS-NEKLQQEDAAEKADAKTYRSLVGSLIYL-TNTRPDIVHSVSLISRFMNQPSKLHYAAAKRVLRYLQGTKKQGILYK-KENGNNLVGFTDSDWAGSLDDRKSTSGYIFCLGSNVIAWSSKKQKTIALSSAEAEYIAATDAACEAIWLRRLLSDL 1278          
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.470e-71
Identity = 155/415 (37.35%), Postives = 228/415 (54.94%), Query Frame = 0
Query:    4 EWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDI-PFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGR-REKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGH-GLEGFVDADWAEDIEDRKSTTGYVFKLN-------VTW----------SSTEAEYVAAGEAGKETVYLRELL 398
            E+ A +KNGTWE   L  L  G + I + W+   K  + G + R + R +A+G+SQ  G D+  T  PV  M+T+R V + A   D EL+ MDVD AYL S  EE++++K  P +  +  +    V RL KSLYGLKQSGRNW+  +D +  G GL  S  D CLY       E  L++ +YVDDL+I    R   D+FK + S+ F MKDL  L  +LG+ ++ +R N T+ ISQ  YI    +K        +VL+ +   + +          EY  +VGSL+YA+  TRPD+A+AV+   + ++   +E++   KR+ R L    D G+K  G S G   L G+ DAD+A D ++R+ST+GY F L+       + W          SS E+E ++A  A +  VY+R+LL
Sbjct:  216 EYQAHMKNGTWE---LTPLPKGERCISSGWVETDKRDQKGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFG-MADCKSVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLL 625          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D6YB57_9STRA2.520e-7838.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT1.270e-7537.17Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2Z7AL20_9LAMI1.980e-7438.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TCB8_9STRA4.840e-7437.41Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
A0A2K3M5H6_TRIPR6.160e-7337.89Retrotransposon protein n=1 Tax=Trifolium pratense... [more]
H3H4L3_PHYRM2.370e-7236.99Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A7D9HZ03_PARCT2.680e-7236.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7JEY7_PARCT2.770e-7236.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7N2MM16_QUELO5.430e-7238.61Uncharacterized protein n=4 Tax=Quercus lobata Tax... [more]
W7TJ26_9STRA1.470e-7137.35Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 21..245
e-value: 4.8E-53
score: 180.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..251
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 131..327
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43586contigH-paniculata_contig43586:19..1341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43586.11081.1mRNA_H-paniculata_contig43586.11081.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig43586 19..1341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig43586.11081.1 ID=prot_H-paniculata_contig43586.11081.1|Name=mRNA_H-paniculata_contig43586.11081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp
MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRV
RLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPA
YLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLD
DFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRREKVDEF
KHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSE
QKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYA
VRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVD
ADWAEDIEDRKSTTGYVFKLNVTWSSTEAEYVAAGEAGKETVYLRELLGS
I
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like