mRNA_H-paniculata_contig43586.11081.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.520e-78 Identity = 163/426 (38.26%), Postives = 233/426 (54.69%), Query Frame = 1
Query: 4 EEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCK---SLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIA-GRREKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQK------------SLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
E E+ +L KN TWE L R GRKAI +KW+FK K G + RY+ RLVA+GF Q G DF ET PV + +++R + S AA++ L MDV A+LN EEE+++K F D + +CK +LYGLKQS R WN T+D+F+ +G + TD C+Y RDD + + V +YVDDL++A + + K S+RF M DLG L LG++V D +G +++ Q ++ + K Q L + + G + ++ +G YR VG+++Y GTRPD+A AV ++ DPC ++ KR+ R L P GI+ G +G L G+ DADWA DIE R+ST+GYVF LN +TW SSTEAEY+A EA +E V+L+ +
Sbjct: 14 ESEFESLCKNKTWELVPLPR---GRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFV----DAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQG-----VPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFM 424
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 257 bits (657), Expect = 1.270e-75 Identity = 155/417 (37.17%), Postives = 245/417 (58.75%), Query Frame = 1
Query: 1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRRE-KVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLS-DIGAQVQESSR-GRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELLGSI 1203
ME+E +L N W +L L RKA+ +KW+F+ K +G++ ++ RLVAQGFSQ G+D+ ET PV R ++RTV + AA+H +L MDV A+LN +EE+++K + F ++ V RL +S+YGLKQS R WN+ LD L +G ++ D C+Y + GE ++AVYVDD+++AG+ + K++E K +++F+MKD+G L LG+ V + I I Q +Y ++ ++ + S A + G ++++++ + + Y+ VG L+Y ST TRPD+AYAV AR DP +E++ KRI R L+ D G+ G G+ DADWA D++DRKST+GYVF+++ ++W S+ EAEY+A A +E V+L++LL +
Sbjct: 1 MEKEMESLKTNEVW---NLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEH-LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEI--FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDL 411
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI) HSP 1 Score: 247 bits (630), Expect = 1.980e-74 Identity = 163/420 (38.81%), Postives = 237/420 (56.43%), Query Frame = 1
Query: 1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAG-RREKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLSDIGAQVQESSRGRSGNSTE--------YRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
M+EE AL +N TW DL L GRKAI +W++K K N + RYR RLV +G++Q G DF E V R++T+R V + A D LE +DV A+L+ EEE+++ L PE + V RL KSLYGLKQ+ R W D +++ +G R D C YF R G + +L+ +YVDD+++AG +++V E K ++ F MKDLG +++LG+ V DR N I +SQ +Y++ + + Q S + + + + SS N E Y VGSL++A TRPD+A AV +R M +P +E++ST KRI R + + + GG L G+VD+D+A D + RKSTTGYVF L V+W S+TEAEY+AA +A KET++++ LL
Sbjct: 1 MQEELEALDRNKTW---DLVTLPRGRKAIGNRWVYKIKRDGNNQVERYRARLVVKGYAQKEGIDFNEIFSLVVRLNTVRVVLALCAVFDLHLEQLDVKTAFLHGDLEEEIYM-LQPEGFAETGKENLVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRSGGNDYIILL-LYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSK-PISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGSYLT--LRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKETIWIQRLL 412
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 247 bits (630), Expect = 4.840e-74 Identity = 156/417 (37.41%), Postives = 227/417 (54.44%), Query Frame = 1
Query: 25 VKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPF-SRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGR-REKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYI-------RASADKPSEQKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGH-GLEGFVDADWAEDIEDRKSTTGYVFKLN-------VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
+KNGTWE L L G + I + W+ K +NG + R + R +A+G+SQ G D+ T PV ++T+R V + A D EL+ MDV+PAYL S EE+++VK P + + S V RL KSLYGLKQSGRNW+ +D + G G S D CLY E L++ +YVDDL+I RE V +FKH S+ F MKDL L +LG+ ++ DR + ISQ +YI R + KP G + G V+ + EY +VGSL+YA+ TRPD+A+AV+ + ++ +E++ KR+ R L + G+K G S G L G+ DAD+A D ++R+ST+GY F L+ + W SS E+E ++A A + +Y+R+LL
Sbjct: 1 MKNGTWE---LTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDN--------EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTIDWRAKQQEVVALSSAESELISACSATQSALYIRQLL 405
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM) HSP 1 Score: 255 bits (652), Expect = 2.370e-72 Identity = 155/419 (36.99%), Postives = 243/419 (58.00%), Query Frame = 1
Query: 19 ALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIP-FVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRREKV-DEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKS------------LGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
+L+KN TW D+ L GRKAI +W+F+ K + G + R++ RLVA+GFSQ G D+ ET PV + +++R V S AA++ +L MDV A+LN +E++++ + D P V +L +SLYGLKQS R WN T+DDF++ +G ++ +D C+Y RD G++ + VA+YVDDLV+A +++ + KH S+RF M DLG L LG+++++D +G +T+ Q ++++ K Q S L + + G Q +++ + + YR VG+L+Y TRPD+A AV ++ DPC ++ KR+ R L P G++ + + G+ G+ DADWA DIE R+ST+GY F +N ++W SSTEAEY+A EA +E V+L+ L
Sbjct: 681 SLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEVERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD-GQDM-IFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMK-----NVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWLKVFL 1086
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 248 bits (632), Expect = 2.680e-72 Identity = 153/415 (36.87%), Postives = 237/415 (57.11%), Query Frame = 1
Query: 1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRR-EKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLSDIGAQ---VQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
M++E +L ++ WE L L RKA+ KW+FK K +GS+ R++ RLVAQGFSQ G D+ ET PV R ++RTV + + + +L MDV A+LN E+E+++K PE +L KSLYGLKQS R WN+ LD+ L +G ++ +D C+Y +DG +VA++VDD+++AG+ EK+ + K + ++RF++KD+G L +LG+ V + + + I Q +Y AS K ++ V + + V N E++ VGSL+Y S+ TRPD+ +AV A+ +P E+++ KRIFR L ++G+ +N + GF DADWA D+ DRKST+GY F++N V+W S+ AEYVA A +E +++R+LL
Sbjct: 165 MQQEMDSLQEHDVWE---LTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMK-QPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYT-ASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLL 569
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 247 bits (631), Expect = 2.770e-72 Identity = 151/417 (36.21%), Postives = 240/417 (57.55%), Query Frame = 1
Query: 1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRRE-KVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLS-DIGAQVQESSR-GRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELLGSI 1203
ME+E +L N W +L L RKA+ +KW+F+ K +G++ ++ RLVAQGFSQ G+D+ ET PV R ++RTV + AA+H +L MDV A+LN +EE+++K F ++ V RL +S+ GLKQS R WN+ LD L +G ++ D C+Y + GE ++AVYVDD+++AG+ + K++E K +++F+MKD+G LG+ V + I I Q +Y ++ ++ + S A + G ++++++ + + Y+ VG L+Y ST TRPD+AYAV AR P +E++ KRI R L+ D G+ G G+ DADWA D++DRKST+GYVF+++ ++W S+ EAEY+ A +E V+L++LL +
Sbjct: 149 MEKEMESLKTNEVW---NLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEI--FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDL 559
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A7N2MM16_QUELO (Uncharacterized protein n=4 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2MM16_QUELO) HSP 1 Score: 255 bits (651), Expect = 5.430e-72 Identity = 161/417 (38.61%), Postives = 233/417 (55.88%), Query Frame = 1
Query: 1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAG-RREKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADK--PSEQKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTWSS----------TEAEYVAAGEAGKETVYLRELLGSI 1203
M+EE ++ KN TWE D L GR I KWI+K K E+GS+ +++ RLVA+G+SQ G DF ET PV RM T+RT + AA+ + E+ +DV A+LN EEE++V+ + ++ V RLCK+LYGLKQ+ R WN+ +D + G +RSI + LY R+ G L++ +YVDDL+ G R+ V++FK + F M DLG + LG VR G + I Q YI K + K + +S ++Q+ ++ YR +VGSLIY T TRPD+ ++V +R M P + +++ KR+ R L GI K NG+ L GF D+DWA ++DRKST+GY+F L + WSS EAEY+AA +A E ++LR LL +
Sbjct: 872 MDEEIASIEKNQTWELVD---LPNGRDVIGLKWIYKTKYNEDGSIQKHKARLVAKGYSQQPGVDFHETFAPVVRMETIRTFLALAAQMELEVFQLDVKSAFLNGDLEEEVYVEQPKGYMKKGKEDK-VYRLCKALYGLKQAPRAWNSKIDGYFRQNGFQRSICEPSLYVKRE-GTRDFLVICLYVDDLIYMGTNRKMVEDFKKAMMKEFEMTDLGLMKYFLGFQVRQS--TGEVFICQEKYIEDLLKKFHMAACKPVSTPMSS-NEKLQQEDAAEKADAKTYRSLVGSLIYL-TNTRPDIVHSVSLISRFMNQPSKLHYAAAKRVLRYLQGTKKQGILYK-KENGNNLVGFTDSDWAGSLDDRKSTSGYIFCLGSNVIAWSSKKQKTIALSSAEAEYIAATDAACEAIWLRRLLSDL 1278
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.470e-71 Identity = 155/415 (37.35%), Postives = 228/415 (54.94%), Query Frame = 1
Query: 10 EWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDI-PFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGR-REKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGAVLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGH-GLEGFVDADWAEDIEDRKSTTGYVFKLN-------VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
E+ A +KNGTWE L L G + I + W+ K + G + R + R +A+G+SQ G D+ T PV M+T+R V + A D EL+ MDVD AYL S EE++++K P + + + V RL KSLYGLKQSGRNW+ +D + G GL S D CLY E L++ +YVDDL+I R D+FK + S+ F MKDL L +LG+ ++ +R N T+ ISQ YI +K +VL+ + + + EY +VGSL+YA+ TRPD+A+AV+ + ++ +E++ KR+ R L D G+K G S G L G+ DAD+A D ++R+ST+GY F L+ + W SS E+E ++A A + VY+R+LL
Sbjct: 216 EYQAHMKNGTWE---LTPLPKGERCISSGWVETDKRDQKGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFG-MADCKSVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLL 625
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 253 bits (646), Expect = 2.090e-71 Identity = 154/417 (36.93%), Postives = 241/417 (57.79%), Query Frame = 1
Query: 1 MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVRLVAQGFSQVGGEDFFETSPPVGRMSTLRTVFSPAAEHDFELEGMDVDPAYLNSPEEEELFVKLSPEFSPFSRDIPFVRRLCKSLYGLKQSGRNWNNTLDDFLVGVGLERSITDSCLYFSRDDGEETNLLVAVYVDDLVIAGRR-EKVDEFKHNTSQRFRMKDLGSLSRVLGIDVRHDRPNGTITISQGSYIRASADKPSEQKSLGA-----VLSDIGAQVQESSRGRSGNSTEYRGMVGSLIYASTGTRPDVAYAVRRAARRMEDPCQEYFSTCKRIFRSLSTVPDFGIKVGGKSNGHGLEGFVDADWAEDIEDRKSTTGYVFKLN---VTW----------SSTEAEYVAAGEAGKETVYLRELL 1194
M++E +L ++ WE L L RKA+ KW+FK K +GS+ R++ RLVAQGFSQ G D+ ET PV R +RTV + + + +L MDV A+LN E+E+++K PE V +L KSLYGLKQS R WN+ LD+ L +G ++ +D C+Y +DG+ +VA++VDD+++AG+ EK+ + K + ++RF++KD+G L +LG+ V + + + I Q +Y + K + + S + + +++S N EY+ VGSL+Y S+ TRPD+ +AV A+ +P E+++ KRIFR L ++G+ +N + GF DADWA D+ DRKST+GY F++N V+W S+ EAEYVA A +E +++R+LL
Sbjct: 779 MQQEMDSLQEHDVWE---LTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMK-QPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELF---NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLL 1183 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43586.11081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig43586.11081.1 >prot_H-paniculata_contig43586.11081.1 ID=prot_H-paniculata_contig43586.11081.1|Name=mRNA_H-paniculata_contig43586.11081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp MEEEWGALVKNGTWESEDLGRLSAGRKAIRTKWIFKRKLKENGSMARYRVback to top mRNA from alignment at H-paniculata_contig43586:19..1341- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig43586.11081.1 ID=mRNA_H-paniculata_contig43586.11081.1|Name=mRNA_H-paniculata_contig43586.11081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1323bp|location=Sequence derived from alignment at H-paniculata_contig43586:19..1341- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig43586:19..1341- >mRNA_H-paniculata_contig43586.11081.1 ID=mRNA_H-paniculata_contig43586.11081.1|Name=mRNA_H-paniculata_contig43586.11081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2406bp|location=Sequence derived from alignment at H-paniculata_contig43586:19..1341- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |