mRNA_H-paniculata_contig43371.11058.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig43371.11058.1
Unique NamemRNA_H-paniculata_contig43371.11058.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: G4TMG6_SERID (Uncharacterized protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TMG6_SERID)

HSP 1 Score: 153 bits (386), Expect = 4.750e-40
Identity = 87/247 (35.22%), Postives = 139/247 (56.28%), Query Frame = 1
Query:   10 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFV-----------------KLHPDFSPLL-PRHTTNLLAAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            EP +  E+LKRP+ +    A  EE    ++NGTW+     RLP G+KAI ++W+FK K + DGS+++YK R+V +G++Q EG D  ET A+ AR   LRT  +LAA  D+ELE +D+  A+ N  ++ ++++                 +L  D S  +  R +  ++  V+VDDL+ A +  E +   K  +  RF+I D G  S +LG++  RD  +   ++SQ +YI ++L+ Y   EC G  T
Sbjct:   54 EPTTLGESLKRPDGDNYVQAAIEEVRAHLENGTWKLV---RLPQGKKAIGSRWVFKIKRDADGSISKYKGRIVAKGYAQREGIDYTETFAQTARFGALRTITALAALEDWELESVDISTAFLNGEIDAKVYMQKLEGVEFEGYEEIGFKRLESDHSVFIYERDSVKIIVPVHVDDLLFASKSSEAIQMVKDELKARFKIHDQGPTSFLLGVKPERDRQSHTISLSQPAYIEQILETYKMQECNGADT 297          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY)

HSP 1 Score: 146 bits (368), Expect = 1.700e-36
Identity = 83/273 (30.40%), Postives = 143/273 (52.38%), Query Frame = 1
Query:   10 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSP--------------------------------------------LLPRHTTNLLAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            EP++ AEA++RP+A+K   A ++E  + ++NGTWE     +LP GRKAI ++W+F+ K   DGS+ RYK RLV QGF+Q  G +  ET A   + +TLRT  ++AA  D E+E +D   AY N  +++++++K    F+                                             +L   T N++  V+VDD  +  + +  + + K  + +RF+++DLG ++++LG+++ RD      ++SQ  Y  ++L  +   +CR V T
Sbjct:  669 EPRTFAEAMRRPDADKWYQAAQDEIKSHLENGTWEL---AQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGFAQRPGLEYDETFASTLKWATLRTILAIAAIEDMEIECIDFSTAYLNGEIDKDVYMKQPEGFADGDQVCKLGKGIYGLKQGGRLWYKKLAATLVSMGFKILRSDNSVYVLSNDTVNVVIPVFVDDCTLVSKDKAAIQKXKDELLKRFKLRDLGPINQLLGVQITRDRSKRTLSLSQRQYXXDILAKFXMADCRPVGT 938          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A6L2LES7_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LES7_TANCI)

HSP 1 Score: 142 bits (358), Expect = 2.030e-36
Identity = 85/240 (35.42%), Postives = 136/240 (56.67%), Query Frame = 1
Query:    1 IQGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTNL--------------LAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHP--------NGDTTISQGSYIREV 651
            I+ +P++ +EA+   +   L+   + E  +++ N TWE  D   LP G KA+  KWI KRK++ DGS+ +YK RLV+QGF Q EG D F+T A VAR+ST+R   +L A HD  +  MDV  A+ N  ++EE+++K    F  ++P H + L              +  +YVDD++I G  +++V++ K  +S +  +KDLG    +LGI ++R +         N  T++SQ  Y R +
Sbjct:  112 IEEDPRTLSEAMASRDVAFLKETFQSEIDSIIHNDTWELTD---LPPGGKALGCKWILKRKIKVDGSIDKYKARLVIQGFRQKEGIDFFDTYASVARISTIRLLLALTAIHDLVIHQMDVKTAFLNGDLDEEIYMKQPEGF--VMPGHESKLTSVCIANLMLLKGVIICLYVDDMLIFGTDQDQVNKTKEFLSSKLDMKDLGKAEVILGIRIKRGNNDPTVKFRHNKGTSVSQLEYSRAI 346          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A8J5ZIB2_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZIB2_9ROSI)

HSP 1 Score: 144 bits (362), Expect = 4.320e-36
Identity = 96/243 (39.51%), Postives = 131/243 (53.91%), Query Frame = 1
Query:   13 PKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPL------LPRHT-------TNLLAA--VYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            P S AEALK P   K R A+EEE   L  N TW   D   LP G+KA+  KWIF  K   +GS+ RYK RLV +GF Q  G D  ET A VA+++T+R   SLA  +D++L  +DV  A+ N  +EEE++++L P    +      L  HT       TN  A   VYVDD+++ G   E++   K  +++    KDLG L   LG+EV R        I+Q  Y+ ++LK  GF  C+   T
Sbjct:  183 PTSIAEALKDP---KWRRAVEEEICALEKNATWTITD---LPQGKKAVGCKWIFAVKYNSNGSIQRYKARLVARGFMQTYGIDFTETFAPVAKLNTIRVLLSLAVNYDWKLHQLDVKNAFLNGKLEEEVYMQLPPSSKSIEGSNKSLADHTLFIKVTSTNKKAILIVYVDDIILTGDDEEEISNLKKLLNRELETKDLGKLRYFLGMEVARSKEG--LVINQRKYVLDLLKETGFLGCKPADT 417          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A438C2R4_VITVI (Copia protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C2R4_VITVI)

HSP 1 Score: 144 bits (364), Expect = 5.920e-36
Identity = 86/241 (35.68%), Postives = 134/241 (55.60%), Query Frame = 1
Query:   13 PKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTN-------------LLAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            P +  EALK     K + A+++E   L  NGTW   D   LP G++ +  KWIF  K + DGSV R+K RLV +GF+Q  G D  ET A VA+++T+R   SLA   D+ L+ +D+  A+ N  +EEE+++++ P F   + ++  N              +  VYVDD++++G   E++   K  +S++F +KDLG+L   LG+EV R        +SQ  YI ++LK  G   C+ + T
Sbjct:  794 PNTIQEALK---ISKWKKAVQDEIDALEKNGTWTITD---LPIGKRPVGCKWIFTIKYKADGSVERFKARLVARGFTQSYGIDYQETFAHVAKLNTIRIFLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQANHTLFVKKSHAGKMAILIVYVDDIILSGNDMEELQNLKKYLSEKFEVKDLGNLKYFLGMEVARSRKG--IVVSQRKYILDLLKETGMLGCKPIDT 1026          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: G4TTI1_SERID (Related to retrotransposon HobS hobase (N-terminal) (Fragment) n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TTI1_SERID)

HSP 1 Score: 134 bits (338), Expect = 1.330e-35
Identity = 79/229 (34.50%), Postives = 128/229 (55.90%), Query Frame = 1
Query:   10 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTNLLAAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            EP +  EALKRP+ +K   A  EE    ++NGTW+     RLP G+KAI ++W+FK K + DGS+++YK R+V +G++Q EG D  ET    AR   LRT  +LAA  D+EL+                +F+    +   ++P         V++DDL++A +  + +   K+ +  RF+I+D G  S +LG+++ RD  +   ++SQ +YI ++L+ Y   +C G  T
Sbjct:    3 EPTTLGEALKRPDGDKYVQAATEEVRAHLENGTWKLV---RLPQGKKAIGSRWVFKIKRDADGSISKYKGRIVAKGYAQREGIDYTETFTPTARFGALRTIIALAALEDWELD----------------VFIYECDNVKIIVP---------VHIDDLLLASKSPDAIQIVKNELKARFKIRDQGPTSFLLGVKLERDRQSRTISLSQPAYIEQILETYEVRDCNGTDT 203          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A0V1HEM8_TRIPS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1HEM8_TRIPS)

HSP 1 Score: 141 bits (355), Expect = 3.380e-35
Identity = 89/253 (35.18%), Postives = 136/253 (53.75%), Query Frame = 1
Query:    4 QGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELF----------------------VKLHPDFSPLLPRHTTNLLAAVYVDDLVIAGRREKV-DEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            Q +P S  EA+ RP+A++   A+ EE  +  +N +WE   P  LP  +K I++KW+FK K ++DG++ + K RLV +G+SQ++G D   T A     S+LR   SLAA+++ E++ MDV  A+ N  + EE++                      +K  P     L ++   L   VYVDDL+I    E   +E K  + +RF+IKDLG     LGI + +D  NG  +I Q  YI E+L  +   +C+GV T
Sbjct:  149 QSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWE---PAVLPPHKKVIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEGTFAPTLGYSSLRYLLSLAAKNNLEVDQMDVVTAFLNLSLNEEIYREASRAWYGELDDTLRSFGLNRLKKEPCIY-FLRKNKIFLAVGVYVDDLLILSNNESAKNELKIALCKRFKIKDLGKAHWCLGIRIVQDVENGTQSIDQEQYIEEMLHRFKMSDCKGVKT 397          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A438HLA1_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HLA1_VITVI)

HSP 1 Score: 140 bits (354), Expect = 6.470e-35
Identity = 86/241 (35.68%), Postives = 134/241 (55.60%), Query Frame = 1
Query:   13 PKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTTN-------------LLAAVYVDDLVIAGR-REKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            P +  EALK  E +K   A+++E   L  NGTW   D   LP G++ +  KWIF  K + DGSV R+K RLV +GF+Q  G D  ET A VA+++T+R   SLA   D+ L+ +D+  A+ N  +EEE+++++ P F   + ++  +              +  VYVDD++++G   E++   K  +S+ F +KDLG+L   LG+EV R        +SQ  YI ++LK  G   C+ + T
Sbjct:  166 PNTIQEALKISEWKK---AVQDEIDALEKNGTWTITD---LPVGKRPVGCKWIFTIKYKADGSVERFKARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQADHTLFVKKSHAGKMAILIVYVDDIILSGNDMEELQNLKKYLSEEFEVKDLGNLKYFLGMEVARSRKG--IVVSQRKYILDLLKETGMLGCKPIDT 398          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A0V1KC64_TRIPS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1KC64_TRIPS)

HSP 1 Score: 141 bits (355), Expect = 9.070e-35
Identity = 88/252 (34.92%), Postives = 136/252 (53.97%), Query Frame = 1
Query:    4 QGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKL----HPDFSPLLPRHTTN-----------------LLAAVYVDDLVIAGRREKV-DEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            Q +P S  EA+ RP+A++   A+ EE  +  +N +WE   P  LP  +K I++KW+FK K ++DG++ + K RLV +G+SQ++G D   T A     S+LR   SLAA+++ E++ MDV  A+ N  + EE++++     + +    L     N                 L   VYVDDL+I    E   +E K  + +RF+IKDLG     LGI + +D  NG  +I Q  YI E+L  +   +C+GV T
Sbjct:  536 QSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWE---PAVLPPHKKVIKSKWVFKTKYKEDGTIEKRKARLVARGYSQLQGIDYEGTFAPTLGYSSLRYLLSLAAKNNLEVDQMDVVTAFLNLSLNEEIYMEASRAWYGELDDTLRSFGLNRLKKEPCIYFLRKNKIFLAVGVYVDDLLILSNNESAKNELKIALCKRFKIKDLGKAHWCLGIRIVQDVENGTQSIDQEQYIEEMLHRFKMSDCKGVKT 784          
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Match: A0A5E8BZK9_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZK9_9ASCO)

HSP 1 Score: 141 bits (355), Expect = 1.010e-34
Identity = 92/256 (35.94%), Postives = 137/256 (53.52%), Query Frame = 1
Query:   10 EPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRKAIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMSTLRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFV--------------KLHPDFSPL-------------LPRHTTNLLAAVYVDDLVIAGRR-EKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRDHPNGDTTISQGSYIREVLKIYGFDECRGVPT 693
            +P S  EA+   EAE    A   E  +L  NGTWE  D   LP GRKAI +KW+FK K + DGS+ RYK RLV  GFSQVEG D  ET A V R  T+R   ++AA+  F++  MDV+ A+ N  ++E++++              K+H     L                 +T ++ A+YVDDL+I+G   E + + K ++S  F++KDLG + + LG+ V++   +   T+    YI ++L+ +G   C  V T
Sbjct: 1137 DPSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKKIHGALVKLGFIRNESDYGVYTKGSGSTMVIIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYH--ITVDVSRYIFDMLEEFGMQNCSSVKT 1387          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43371.11058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4TMG6_SERID4.750e-4035.22Uncharacterized protein n=1 Tax=Serendipita indica... [more]
A0A4S4M1D7_9APHY1.700e-3630.40Integrase catalytic domain-containing protein (Fra... [more]
A0A6L2LES7_TANCI2.030e-3635.42Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A8J5ZIB2_9ROSI4.320e-3639.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438C2R4_VITVI5.920e-3635.68Copia protein n=1 Tax=Vitis vinifera TaxID=29760 R... [more]
G4TTI1_SERID1.330e-3534.50Related to retrotransposon HobS hobase (N-terminal... [more]
A0A0V1HEM8_TRIPS3.380e-3535.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A438HLA1_VITVI6.470e-3535.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A0V1KC64_TRIPS9.070e-3534.92Retrovirus-related Pol polyprotein from transposon... [more]
A0A5E8BZK9_9ASCO1.010e-3435.94Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig43371contigH-paniculata_contig43371:149..998 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score155.6
Seed ortholog evalue2.8e-35
Seed eggNOG ortholog65672.G4TMG6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons2
Model size699
Cds size699
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930317.0334756-CDS-H-paniculata_contig43371:148..4001622930317.0334756-CDS-H-paniculata_contig43371:148..400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig43371 149..400 -
1691481238.9071257-CDS-H-paniculata_contig43371:148..4001691481238.9071257-CDS-H-paniculata_contig43371:148..400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig43371 149..400 -
1622930317.0548549-CDS-H-paniculata_contig43371:551..9981622930317.0548549-CDS-H-paniculata_contig43371:551..998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig43371 552..998 -
1691481238.9201438-CDS-H-paniculata_contig43371:551..9981691481238.9201438-CDS-H-paniculata_contig43371:551..998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig43371 552..998 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig43371.11058.1prot_H-paniculata_contig43371.11058.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig43371 149..998 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig43371.11058.1

>prot_H-paniculata_contig43371.11058.1 ID=prot_H-paniculata_contig43371.11058.1|Name=mRNA_H-paniculata_contig43371.11058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
IQGEPKSAAEALKRPEAEKLRAAMEEEWGTLVDNGTWENEDPGRLPAGRK
AIRTKWIFKRKLEDDGSVARYKTRLVVQGFSQVEGEDCFETSARVARMST
LRTGFSLAAEHDFELEGMDVDAAYSNAPVEEELFVKLHPDFSPLLPRHTT
NLLAAVYVDDLVIAGRREKVDEFKHNISQRFRIKDLGSLSRVLGIEVRRD
HPNGDTTISQGSYIREVLKIYGFDECRGVPTL*
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mRNA from alignment at H-paniculata_contig43371:149..998-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig43371.11058.1 ID=mRNA_H-paniculata_contig43371.11058.1|Name=mRNA_H-paniculata_contig43371.11058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=850bp|location=Sequence derived from alignment at H-paniculata_contig43371:149..998- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCAAGGGGAGCCGAAATCCGCAGCAGAAGCATTAAAGCGTCCAGAGGC GGAAAAATTGCGCGCGGCAATGGAGGAAGAATGGGGGACGTTGGTGGACA ATGGGACATGGGAAAACGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAG GCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGGAGGACGACGGTAG CGTGGCACGCTACAAAACGCGACTGGTGGTTCAAGGTTTTTCACAGGTGG AGGGTGAAGATTGCTTTGAAACTAGTGCCCGCGTAGCTCGCATGTCGACG TTACGTACTGGTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGG CATGGATGTAGATGCGGCGTATTCGAACGCCCCGGTAGAAGAAGAGCTGT TTGTTAAGCTACACCCCGACTTTTCCCCCCTTCTCCCGAGACATACCGTT TGTGCGCCACCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAA ACTGGAATAACACTCTTGATGATTTTCTTGTTGGGATGGGACTCGACCAT TCCACTACCGACTAATGCTTGTACTTTTCCCGTGACGAAGGGGGAGAGAC AAACCTTCTGGCGGCCGTCTATGTTGACGACCTGGTCATCGCTGGTCGCC GTGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATA AAAGACTTGGGTTCTCTCTCGCGCGTGTTGGGAATAGAAGTGCGACGTGA CCACCCTAATGGTGACACAACCATCTCGCAGGGTAGCTACATCCGCGAGG TACTAAAAATATACGGTTTTGACGAGTGTCGAGGAGTACCCACCCTGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig43371:149..998-

>mRNA_H-paniculata_contig43371.11058.1 ID=mRNA_H-paniculata_contig43371.11058.1|Name=mRNA_H-paniculata_contig43371.11058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig43371:149..998- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCAAGGGGAGCCGAAATCCGCAGCAGAAGCATTAAAGCGTCCAGAGGC
GGAAAAATTGCGCGCGGCAATGGAGGAAGAATGGGGGACGTTGGTGGACA
ATGGGACATGGGAAAACGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAG
GCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGGAGGACGACGGTAG
CGTGGCACGCTACAAAACGCGACTGGTGGTTCAAGGTTTTTCACAGGTGG
AGGGTGAAGATTGCTTTGAAACTAGTGCCCGCGTAGCTCGCATGTCGACG
TTACGTACTGGTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGG
CATGGATGTAGATGCGGCGTATTCGAACGCCCCGGTAGAAGAAGAGCTGT
TTGTTAAGCTACACCCCGACTTTTCCCCCCTTCTCCCGAGACATACCATC
CAAGGGGAGCCGAAATCCGCAGCAGAAGCATTAAAGCGTCCAGAGGCGGA
AAAATTGCGCGCGGCAATGGAGGAAGAATGGGGGACGTTGGTGGACAATG
GGACATGGGAAAACGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAGGCG
ATTCGTACGAAATGGATTTTCAAGCGGAAACTGGAGGACGACGGTAGCGT
GGCACGCTACAAAACGCGACTGGTGGTTCAAGGTTTTTCACAGGTGGAGG
GTGAAGATTGCTTTGAAACTAGTGCCCGCGTAGCTCGCATGTCGACGTTA
CGTACTGGTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCAT
GGATGTAGATGCGGCGTATTCGAACGCCCCGGTAGAAGAAGAGCTGTTTG
TTAAGCTACACCCCGACTTTTCCCCCCTTCTCCCGAGACATACCACAAAC
CTTCTGGCGGCCGTCTATGTTGACGACCTGGTCATCGCTGGTCGCCGTGA
GAAAGTAGACGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATAAAAG
ACTTGGGTTCTCTCTCGCGCGTGTTGGGAATAGAAGTGCGACGTGACCAC
CCTAATGGTGACACAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACT
AAAAATATACGGTTTTGACGAGTGTCGAGGAGTACCCACCCTGTAGACAA
ACCTTCTGGCGGCCGTCTATGTTGACGACCTGGTCATCGCTGGTCGCCGT
GAGAAAGTAGACGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATAAA
AGACTTGGGTTCTCTCTCGCGCGTGTTGGGAATAGAAGTGCGACGTGACC
ACCCTAATGGTGACACAACCATCTCGCAGGGTAGCTACATCCGCGAGGTA
CTAAAAATATACGGTTTTGACGAGTGTCGAGGAGTACCCACCCTGTAG
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