prot_H-paniculata_contig4337.11057.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4337.11057.1
Unique Nameprot_H-paniculata_contig4337.11057.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: D8LGR8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR8_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 5.050e-69
Identity = 120/228 (52.63%), Postives = 148/228 (64.91%), Query Frame = 0
Query:    1 MIPLVAAIVLAGAAGAGPVLVSDACGTDTTDNVD---ARCAVAEVERVMKTKQRPKELKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRN-EKEKSVATSGCCSAMEIRCPSGKES---------------------NDDVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA 203
            MIPL+AAI+LAGAAGAGPVLVSDACG+DTT N D    RCAV  V R MK K+RP ELKVE +GKLYSVPE VEM+ P  +  L+ WW+EF  +     +    K K V +     + +     G  S                     N DV S G+HSCQICF+ +HSTVMLPCGHGG+CWDCG+Q++ALTEECPMCR KI+LLV+LD   RR   ++++VS +CA
Sbjct:   95 MIPLLAAILLAGAAGAGPVLVSDACGSDTTTNDDLARGRCAVETVSRNMKAKERPAELKVEAEGKLYSVPEGVEMLTPPPQGELDQWWKEFFRKFREFCSGGANKAKVVGSDSARPSGDAAGDQGNSSQSDSDNGGDDDGTVQGEAAVANKDVRSAGEHSCQICFDQDHSTVMLPCGHGGLCWDCGLQIYALTEECPMCRTKIELLVQLDGEKRRYEGEDEYVSALCA 322          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A6H5J784_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J784_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 9.020e-45
Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 0
Query:   55 LKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNEKEKSVATSGCCSAMEIRCPSGKESND--------------------------DVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA 203
            L+VE +GKLYSVPE VEM+ P  +  L+ WW+EF  +     +    +  V   G  SA   R   G + N                           DV SVG+HSCQICF+ +HSTVMLPCGHGG+CWDCG+Q++ALTEECPMCR KI+LLV+LD   RR   ++++VS +CA
Sbjct:   17 LQVEAEGKLYSVPEGVEMLTPPPQSELDQWWKEFFRKFREFCSGGANKAKVV--GSDSARPSRDAVGDQGNSSQSDSGGXXXXTHXXXXXXXXXXAPKDVRSVGEHSCQICFDQDHSTVMLPCGHGGLCWDCGLQIYALTEECPMCRTKIELLVQLDGEKRRYEGEDEYVSALCA 189          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A6H5J9Q3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.090e-37
Identity = 80/225 (35.56%), Postives = 118/225 (52.44%), Query Frame = 0
Query:    1 MIPLVAAIVLAGAAGAGPVLVSDA--CGTDTTDNVD----ARCAVAEVERVMKTKQRPKELKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNEKEKSVATSGCCSAMEIRCPSGKESND---------------------DVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFV 198
            M+P VA  V+ G +  GP L+     C ++ + + +    +RC V EV R M+ ++ P ELKVE +GKLYS+P+ V+MV+P        WW+    +     + +     +     C   E+      + ND                     D+ S  + +CQICF   +STVMLPCGHGG+CW+CG+ ++AL EECPMCR KI+LLV LD  ++R     +FV
Sbjct:    1 MLPFVAIAVVFGVSMLGPFLMGSQGDCSSNNSSSSEERTVSRCEVEEVARAMRKRKMPVELKVEAEGKLYSIPDGVKMVRPGFEGKKGKWWKRISRKTKDSSDDDGGSNDMPKPPAC-LEEVMATGAADGNDVAPGRRSGDGDIGGEGPAAGEDLRSAVERACQICFGQNYSTVMLPCGHGGLCWECGLHIYALKEECPMCRTKIELLVPLDNENKRFEGGREFV 224          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: D8LGR9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR9_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.590e-31
Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 0
Query:   57 VETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNEKEKSVATSGCCSAM-------EIRCPSGKESND---------------------DVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA 203
            VE +GKLYSVP+ V+MV+P+++     WW+         ++R  K+ S+   G            E       + ND                     D+ S G+ +CQICF+ ++STVMLPCGHGG+CW+CG+ ++ LTEECPMCR KI+LLV LD  ++R     +FVS   A
Sbjct:   16 VEAEGKLYSVPDGVKMVRPSSKRKKGKWWKR--------ISRKTKDASIDEGGSNDMAKPPACFEEAMARGAADGNDVAPGSQSXXXXXXXXXXXAGKDLRSAGERACQICFDQDYSTVMLPCGHGGLCWECGLHIYTLTEECPMCRTKIELLVPLDNENKRFEGGCEFVSSSAA 182          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A6H5J7E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7E4_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.680e-13
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 MIPLVAAIVLAGAAGAGPVLVSDACGTDTTDNVD---ARCAVAEVERVMKTKQRPKELK 56
            MIPL+AAI+LAGAAGAGPVLVSDACG+DTT N D    RCAV  V R MK K+RP ELK
Sbjct:    1 MIPLLAAILLAGAAGAGPVLVSDACGSDTTTNDDLGRGRCAVETVCRNMKAKERPAELK 59          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: Q23UD8_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23UD8_TETTS)

HSP 1 Score: 75.1 bits (183), Expect = 3.340e-12
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 0
Query:   95 LVNRNEKEKSVATSGCCSAMEIRCPSGKESNDDVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDY 186
            L   N K K +       + +I   S KE+ D+     + +C ICFE+E  TV LPCGHGG+C++CG+ +   T EC +CR++I  +V++D+
Sbjct:  788 LAKLNVKPKEMVKKQKSDSSQISQKSYKENGDE----SNANCVICFENEPDTVYLPCGHGGICYECGMDVMKKTGECYLCRHEIKQVVQIDF 875          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: Q23UD7_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23UD7_TETTS)

HSP 1 Score: 67.4 bits (163), Expect = 1.370e-9
Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 0
Query:  128 VPSVGDHS---CQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSV 200
             P++ D S   C ICF++   +V +PCGHGGVC++C V +   T EC +CR  I  ++RLD  ++ +  + + V++
Sbjct:  660 APNMNDQSNVTCVICFDNAPDSVYMPCGHGGVCYECSVDIMKNTGECYLCREAIKEILRLDIKEKAQNNNFRVVAL 735          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A0V0QC50_PSEPJ (RING-type domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QC50_PSEPJ)

HSP 1 Score: 65.9 bits (159), Expect = 1.790e-9
Identity = 30/115 (26.09%), Postives = 58/115 (50.43%), Query Frame = 0
Query:   86 QEFVVRVATLVNRNEKEKSVATSGCCSAMEIRCPSGKESNDDVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSV 200
            QE  V++ TL+       S  T       + + P    + +D   + +  C +CF++E + V +PCGHGG+C++C + +    EEC +CR+K+  + +++   +     +   SV
Sbjct:  122 QEVQVKLNTLLT------SPITKEILEKQKEKSPYSNVNKNDNEQIQEEPCLVCFDNEPNAVNMPCGHGGICYECALDLLQKKEECFLCRDKLTEVFQIEQDAQNNGNFKIMASV 230          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: I7MAP5_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MAP5_TETTS)

HSP 1 Score: 66.2 bits (160), Expect = 3.230e-9
Identity = 22/53 (41.51%), Postives = 39/53 (73.58%), Query Frame = 0
Query:  135 SCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYG 187
            +C +CFE++  TV + CGHGG+C++C + ++  T+EC +CR K++ L +L+Y 
Sbjct:  535 NCLVCFENQPDTVFMNCGHGGICYECALLIWKNTQECYLCRQKVEQLYQLEYN 587          
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: I7LXF1_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LXF1_TETTS)

HSP 1 Score: 64.7 bits (156), Expect = 4.080e-9
Identity = 21/59 (35.59%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  133 DHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRRE 191
            + +C ICF++   +V + CGHGG+C+DC + ++ +T EC +CR KI  ++++D   +++
Sbjct:  162 EQNCLICFQNSQDSVFMNCGHGGICYDCSLDIWKITGECYLCREKIKQILQIDLQYKKQ 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGR8_ECTSI5.050e-6952.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J784_9PHAE9.020e-4545.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J9Q3_9PHAE2.090e-3735.56RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGR9_ECTSI2.590e-3137.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J7E4_9PHAE1.680e-1372.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q23UD8_TETTS3.340e-1238.04Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
Q23UD7_TETTS1.370e-936.84Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
A0A0V0QC50_PSEPJ1.790e-926.09RING-type domain-containing protein n=1 Tax=Pseudo... [more]
I7MAP5_TETTS3.230e-941.51Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
I7LXF1_TETTS4.080e-935.59Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 136..174
e-value: 1.3E-5
score: 34.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 136..175
score: 10.999
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 120..190
e-value: 3.1E-13
score: 50.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 133..179
e-value: 5.2E-13
score: 48.6
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 131..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.709
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 130..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4337contigH-paniculata_contig4337:6086..13765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4337.11057.1mRNA_H-paniculata_contig4337.11057.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4337 6030..15357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4337.11057.1 ID=prot_H-paniculata_contig4337.11057.1|Name=mRNA_H-paniculata_contig4337.11057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MIPLVAAIVLAGAAGAGPVLVSDACGTDTTDNVDARCAVAEVERVMKTKQ
RPKELKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNE
KEKSVATSGCCSAMEIRCPSGKESNDDVPSVGDHSCQICFEHEHSTVMLP
CGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSV
ICA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD