mRNA_H-paniculata_contig4337.11057.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4337.11057.1
Unique NamemRNA_H-paniculata_contig4337.11057.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: D8LGR8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR8_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 4.740e-63
Identity = 120/228 (52.63%), Postives = 148/228 (64.91%), Query Frame = 3 
Query:   57 MIPLVAAIVLAGAAGAGPVLVSDACGTDTTDNVD---ARCAVAEVERVMKTKQRPKELKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRN-EKEKSVATSGCCSAMEIRCPSGKES---------------------NDDVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA 665
            MIPL+AAI+LAGAAGAGPVLVSDACG+DTT N D    RCAV  V R MK K+RP ELKVE +GKLYSVPE VEM+ P  +  L+ WW+EF  +     +    K K V +     + +     G  S                     N DV S G+HSCQICF+ +HSTVMLPCGHGG+CWDCG+Q++ALTEECPMCR KI+LLV+LD   RR   ++++VS +CA
Sbjct:   95 MIPLLAAILLAGAAGAGPVLVSDACGSDTTTNDDLARGRCAVETVSRNMKAKERPAELKVEAEGKLYSVPEGVEMLTPPPQGELDQWWKEFFRKFREFCSGGANKAKVVGSDSARPSGDAAGDQGNSSQSDSDNGGDDDGTVQGEAAVANKDVRSAGEHSCQICFDQDHSTVMLPCGHGGLCWDCGLQIYALTEECPMCRTKIELLVQLDGEKRRYEGEDEYVSALCA 322
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BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A6H5J784_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J784_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 3.080e-40
Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 3 
Query:  219 LKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNEKEKSVATSGCCSAMEIRCPSGKESND--------------------------DVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA 665
            L+VE +GKLYSVPE VEM+ P  +  L+ WW+EF  +     +    +  V   G  SA   R   G + N                           DV SVG+HSCQICF+ +HSTVMLPCGHGG+CWDCG+Q++ALTEECPMCR KI+LLV+LD   RR   ++++VS +CA
Sbjct:   17 LQVEAEGKLYSVPEGVEMLTPPPQSELDQWWKEFFRKFREFCSGGANKAKVV--GSDSARPSRDAVGDQGNSSQSDSGGXXXXTHXXXXXXXXXXAPKDVRSVGEHSCQICFDQDHSTVMLPCGHGGLCWDCGLQIYALTEECPMCRTKIELLVQLDGEKRRYEGEDEYVSALCA 189
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BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A6H5J9Q3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q3_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 4.950e-34
Identity = 83/237 (35.02%), Postives = 121/237 (51.05%), Query Frame = 3 
Query:   57 MIPLVAAIVLAGAAGAGPVLVSDA--CGTDTTDNVD----ARCAVAEVERVMKTKQRPKELKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNEKEKSVATSGCCSAMEIRCPSGKESND---------------------DVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA*WTKGHT 686
            M+P VA  V+ G +  GP L+     C ++ + + +    +RC V EV R M+ ++ P ELKVE +GKLYS+P+ V+MV+P        WW+    +     + +     +     C   E+      + ND                     D+ S  + +CQICF   +STVMLPCGHGG+CW+CG+ ++AL EECPMCR KI+LLV LD  ++R     +FV    A    G T
Sbjct:    1 MLPFVAIAVVFGVSMLGPFLMGSQGDCSSNNSSSSEERTVSRCEVEEVARAMRKRKMPVELKVEAEGKLYSIPDGVKMVRPGFEGKKGKWWKRISRKTKDSSDDDGGSNDMPKPPAC-LEEVMATGAADGNDVAPGRRSGDGDIGGEGPAAGEDLRSAVERACQICFGQNYSTVMLPCGHGGLCWECGLHIYALKEECPMCRTKIELLVPLDNENKRFEGGREFVPSSTAFGKDGKT 236
[Close]
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: D8LGR9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR9_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.830e-28
Identity = 68/182 (37.36%), Postives = 96/182 (52.75%), Query Frame = 3 
Query:  225 VETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNEKEKSVATSGCCSAM-------EIRCPSGKESND---------------------DVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA*WTKGHT 686
            VE +GKLYSVP+ V+MV+P+++     WW+         ++R  K+ S+   G            E       + ND                     D+ S G+ +CQICF+ ++STVMLPCGHGG+CW+CG+ ++ LTEECPMCR KI+LLV LD  ++R     +FVS   A    G T
Sbjct:   16 VEAEGKLYSVPDGVKMVRPSSKRKKGKWWKR--------ISRKTKDASIDEGGSNDMAKPPACFEEAMARGAADGNDVAPGSQSXXXXXXXXXXXAGKDLRSAGERACQICFDQDYSTVMLPCGHGGLCWECGLHIYTLTEECPMCRTKIELLVPLDNENKRFEGGCEFVSSSAAFGKDGKT 189
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BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A6H5J7E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7E4_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.920e-12
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 3 
Query:   57 MIPLVAAIVLAGAAGAGPVLVSDACGTDTTDNVD---ARCAVAEVERVMKTKQRPKELK 224
            MIPL+AAI+LAGAAGAGPVLVSDACG+DTT N D    RCAV  V R MK K+RP ELK
Sbjct:    1 MIPLLAAILLAGAAGAGPVLVSDACGSDTTTNDDLGRGRCAVETVCRNMKAKERPAELK 59
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BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: Q23UD8_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23UD8_TETTS)

HSP 1 Score: 75.1 bits (183), Expect = 4.030e-10
Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 3 
Query:  339 LVNRNEKEKSVATSGCCSAMEIRCPSGKESNDDVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSVICA 665
            L   N K K +       + +I   S KE+ D+     + +C ICFE+E  TV LPCGHGG+C++CG+ +   T EC +CR++I  +V++D+    +AQ ++ +++  A
Sbjct:  788 LAKLNVKPKEMVKKQKSDSSQISQKSYKENGDE----SNANCVICFENEPDTVYLPCGHGGICYECGMDVMKKTGECYLCRHEIKQVVQIDFKST-DAQ-KKIIAITAA 890
[Close]
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: A0A0V0QC50_PSEPJ (RING-type domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QC50_PSEPJ)

HSP 1 Score: 65.9 bits (159), Expect = 4.000e-8
Identity = 30/115 (26.09%), Postives = 58/115 (50.43%), Query Frame = 3 
Query:  312 QEFVVRVATLVNRNEKEKSVATSGCCSAMEIRCPSGKESNDDVPSVGDHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSV 656
            QE  V++ TL+       S  T       + + P    + +D   + +  C +CF++E + V +PCGHGG+C++C + +    EEC +CR+K+  + +++   +     +   SV
Sbjct:  122 QEVQVKLNTLLT------SPITKEILEKQKEKSPYSNVNKNDNEQIQEEPCLVCFDNEPNAVNMPCGHGGICYECALDLLQKKEECFLCRDKLTEVFQIEQDAQNNGNFKIMASV 230
[Close]
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: Q23UD7_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23UD7_TETTS)

HSP 1 Score: 67.4 bits (163), Expect = 8.030e-8
Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 3 
Query:  438 VPSVGDHS---CQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSV 656
             P++ D S   C ICF++   +V +PCGHGGVC++C V +   T EC +CR  I  ++RLD  ++ +  + + V++
Sbjct:  660 APNMNDQSNVTCVICFDNAPDSVYMPCGHGGVCYECSVDIMKNTGECYLCREAIKEILRLDIKEKAQNNNFRVVAL 735
[Close]
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: I7LXF1_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LXF1_TETTS)

HSP 1 Score: 64.3 bits (155), Expect = 1.100e-7
Identity = 21/59 (35.59%), Postives = 41/59 (69.49%), Query Frame = 3 
Query:  453 DHSCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRRE 629
            + +C ICF++   +V + CGHGG+C+DC + ++ +T EC +CR KI  ++++D   +++
Sbjct:  162 EQNCLICFQNSQDSVFMNCGHGGICYDCSLDIWKITGECYLCREKIKQILQIDLQYKKQ 220
[Close]
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Match: I7MAP5_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MAP5_TETTS)

HSP 1 Score: 65.9 bits (159), Expect = 2.080e-7
Identity = 22/53 (41.51%), Postives = 39/53 (73.58%), Query Frame = 3 
Query:  459 SCQICFEHEHSTVMLPCGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYG 617
            +C +CFE++  TV + CGHGG+C++C + ++  T+EC +CR K++ L +L+Y 
Sbjct:  535 NCLVCFENQPDTVFMNCGHGGICYECALLIWKNTQECYLCRQKVEQLYQLEYN 587
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4337.11057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGR8_ECTSI4.740e-6352.63RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J784_9PHAE3.080e-4045.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J9Q3_9PHAE4.950e-3435.02RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGR9_ECTSI2.830e-2837.36RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J7E4_9PHAE1.920e-1272.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q23UD8_TETTS4.030e-1034.86Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
A0A0V0QC50_PSEPJ4.000e-826.09RING-type domain-containing protein n=1 Tax=Pseudo... [more]
Q23UD7_TETTS8.030e-836.84Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
I7LXF1_TETTS1.100e-735.59Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]
I7MAP5_TETTS2.080e-741.51Zinc finger, C3HC4 type (RING finger) protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4337contigH-paniculata_contig4337:6030..15357 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.9
Seed ortholog evalue3.3e-56
Seed eggNOG ortholog2880.D8LGR8
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Zinc finger, C3HC4 type (RING finger)
EggNOG OGs2D0IR@1,2SECD@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-07_005280.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2260
Cds size612
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930316.8657377-UTR-H-paniculata_contig4337:6029..60851622930316.8657377-UTR-H-paniculata_contig4337:6029..6085Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4337 6030..6085 +
1691481238.8450162-UTR-H-paniculata_contig4337:6029..60851691481238.8450162-UTR-H-paniculata_contig4337:6029..6085Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4337 6030..6085 +
1622930316.9782279-UTR-H-paniculata_contig4337:13765..153571622930316.9782279-UTR-H-paniculata_contig4337:13765..15357Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4337 13766..15357 +
1691481238.8984199-UTR-H-paniculata_contig4337:13765..153571691481238.8984199-UTR-H-paniculata_contig4337:13765..15357Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4337 13766..15357 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930316.8798053-CDS-H-paniculata_contig4337:6085..62531622930316.8798053-CDS-H-paniculata_contig4337:6085..6253Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 6086..6253 +
1691481238.8560143-CDS-H-paniculata_contig4337:6085..62531691481238.8560143-CDS-H-paniculata_contig4337:6085..6253Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 6086..6253 +
1622930316.8963003-CDS-H-paniculata_contig4337:7823..79131622930316.8963003-CDS-H-paniculata_contig4337:7823..7913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 7824..7913 +
1691481238.8640893-CDS-H-paniculata_contig4337:7823..79131691481238.8640893-CDS-H-paniculata_contig4337:7823..7913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 7824..7913 +
1622930316.9158773-CDS-H-paniculata_contig4337:8691..87921622930316.9158773-CDS-H-paniculata_contig4337:8691..8792Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 8692..8792 +
1691481238.8718498-CDS-H-paniculata_contig4337:8691..87921691481238.8718498-CDS-H-paniculata_contig4337:8691..8792Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 8692..8792 +
1622930316.9420793-CDS-H-paniculata_contig4337:10450..106311622930316.9420793-CDS-H-paniculata_contig4337:10450..10631Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 10451..10631 +
1691481238.8796027-CDS-H-paniculata_contig4337:10450..106311691481238.8796027-CDS-H-paniculata_contig4337:10450..10631Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 10451..10631 +
1622930316.9627473-CDS-H-paniculata_contig4337:13693..137651622930316.9627473-CDS-H-paniculata_contig4337:13693..13765Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 13694..13765 +
1691481238.89037-CDS-H-paniculata_contig4337:13693..137651691481238.89037-CDS-H-paniculata_contig4337:13693..13765Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4337 13694..13765 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4337.11057.1prot_H-paniculata_contig4337.11057.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4337 6086..13765 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4337.11057.1

>prot_H-paniculata_contig4337.11057.1 ID=prot_H-paniculata_contig4337.11057.1|Name=mRNA_H-paniculata_contig4337.11057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MIPLVAAIVLAGAAGAGPVLVSDACGTDTTDNVDARCAVAEVERVMKTKQ
RPKELKVETDGKLYSVPEQVEMVQPAARPLLEGWWQEFVVRVATLVNRNE
KEKSVATSGCCSAMEIRCPSGKESNDDVPSVGDHSCQICFEHEHSTVMLP
CGHGGVCWDCGVQMFALTEECPMCRNKIDLLVRLDYGDRREAQDEQFVSV
ICA*
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mRNA from alignment at H-paniculata_contig4337:6030..15357+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4337.11057.1 ID=mRNA_H-paniculata_contig4337.11057.1|Name=mRNA_H-paniculata_contig4337.11057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9328bp|location=Sequence derived from alignment at H-paniculata_contig4337:6030..15357+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTCAACATTCGCTCACAGGGTAAAATCGTGACGGAGTGTTATTCATTAG
AGTGTGATGATTCCTTTAGTAGCTGCGATCGTTTTGGCGGGGGCCGCGGG
AGCAGGCCCGGTGCTCGTGAGCGATGCGTGTGGAACGGATACTACAGACA
ATGTAGACGCAAGGTGTGCCGTGGCGGAGGTCGAGCGCGTTATGAAGACG
AAGCAACGCCCGAAAGAACTCAAGGTGAGGCTTGTTTAACGCCTCCTTGG
CTGTTCTGGGCAGGTAGGTGGTGCCGCGGGATGCGTCTGTGTGCCCCCTG
AACTGGGCATAATAAACATGCATGGGTTCCTGCGACGCTAGTATAGGTTA
GTGTTTTGGAAGTTCAACCTGGATGGGGGCTGTTAGGGGGATCTCCAGGG
CTGTAAGGGATGGGCACAACGCGATCAGCCCAACTACGAACTCCGAAAAC
GGCCACCTGAATCTAAATAATAACATGATCGTTTTTGGGCCTGACACGGT
TTAGCGAAATGAAATATGGTTGTGTTTTAGATGAAATGTATAACAAGCCA
GATGGATCCTGGAATTTTTTTAGGTTGGATAGTCAGGACGTGTGGGTCGT
GGGCTGATGTTTTCAAATTTTCCATCGATTGGATTGAAGTCGTTGGTCCA
AAGGGTCAAAGTGTGCATAGTCAGTATGGTGTTGACCCTGTACCGGGGAA
ATGTATTTCTTTTCTTACTGTAGCAATGAGGCCTTATTCGGAATAGAAAC
ACTTGACTCCGTTAGTTGCGGGCGGAACTGTGCCTTCAACGTGTTTGTGT
TGCGTGTACTCCTTTTGATTGAATTGGCTATCTGAACAGCAGCAGTTCCC
TCATCCGTAATAATGTTCTCCGCGTCTTTCTCCCTCGGGGATAGAAAATT
GATTTAATCGGAGCGAGCATGGCCGATAATTGCCTTGGCATTGTTCCTGC
AGCAGCACTCCGTCAAGCAAGCGCTCACCTAATAAACTAGACATATTTAC
CACCTGAGGAGATGATAACATTCTGACTTTTTTCAGGATTCCACGTGAAT
TTCTGTCGTGCTGTACTGTACTGCTGTATGTTGCTCGTGAATATGCGCAG
TCTGACAAAGTAACAAGAGCTGTTCACTGTAGTTGAAGGAGTGGACACTC
AAGATTTTGTGCTGTGGCTGTCAGCAGACCGGGCATGTAAAGGAAAATAT
ATGGTGTACTTACTCCAGCACTACGAAATTGTTTCCAAAATAAACACTTG
ACTTTTAAAATATCGAGTATATTTCTATTCGCGCTTATTTCTCCCATCAC
TCGAGGAAAATAATATTCGCCGCAGAATGGTGTGCGGCAGAAAAAAAATT
ACATCCTTCAGAGTGTGCCGCCTAGACATGAACTTTGACGAGCCAACGGG
ATTACTGCGCCCTCCCGAAGTCTCTGGCGCCAATTTACGAGTACTGCGAC
AACAACTGTCAGTACATTCTCACCGTCCCGACCAACGCGTTGGGTTATAG
AGTCAACAATGCGGAATGCCTGTACAAGGTAAAGGGGGATGAGATTGCCA
CCATGTTGTCCACAGTAAAACTGGTATATTTTTTCTGCGGATAGATTACT
TTCGATAGTGCGTGCGACTCTCCCTTTGACCCCATTCACACCCCCTTGCA
TCCTGATGAGAGCACCCGACTGTGATTACTTCAACGGATCACTGTGGTGG
AGATGCGCCCGTCATGCTTACCAACAGAGCTATTACGTTGTTGTTTGATC
CTACATGGCCTTGCCGTGGCACATGGACGTTGTTGATGTTTCAGGTTGAG
ACAGACGGCAAGCTCTACTCCGTGCCGGAACAAGTCGAAATGGTGCAGCC
GGCGGCGCGGCCTTTGCTAGAAGGCTGGTGGCAGGTGAAGGGGACCTTCA
CCAGGTTCATATCGCTAAACACTGATGCATGCACGGACGCGGGACGGGTT
TGTGCTTACTGCTGGGTTAACCCGTATTGTGTACTGCCGATCGAAAGGCT
GGTCAACAGCCACTTTGCTCATGGTTCGGTTGTTCTGTGTGGCTGGGTGC
GGGCGGAATCGGCACAGAATTTGTAACCATGGCCCACTCTGTTCGTGACC
AGTACAGCATGTTGCGAGATGGAAGAGCTTAGTTCGGTGTCGTTAACACT
GTGCGTGAGTACTTGATCCACATGTAGGCGGGATATCACATTTGTAAATT
ACCCAAGAATTGTAGATTCAAGTCGGGTCACCACTTCAAGCATGGACAAG
CATGCCCACGAAGAGCGCGCGGTAGGAAGGTCTTAAATATTCAATACGGA
CGGATTAACGTTGCTGAATTCGGCACCTGGGTGTACGTTACGCGCTAGTT
GCCAAACGTCGAACTGCATCCAGGTACTCCTAATTCTTTCTCATTTGACA
TCTGGGAGTGCAAGATCCCCCGCTAATTGTTACGATACACAGGGTGATAC
ATCAGTAGTGCTGTAAGTTCGTCATACTTGCATCGGTCATTATACAAGGT
CCATTGACTTCGAAAGGTGAGAATGCCTCACGAATCCATAGCGATCAGAC
AGTGGGGTCGAGTTCCCTCCGCGAGTGGACTTGTTCTGGTATGCGTAGTC
GCTGATTGTGCAATGCTCTACTTGGTGTGGTGTTGTTCACGTTTCGTGAA
AACTTGAAACAGGAGTTCGTGGTGCGAGTTGCCACCCTTGTGAATCGGAA
CGAAAAGGAGAAGTCGGTGGCGACCTCGGGATGCTGCAGTGCGATGGAAA
TCAGGTGCCCAAGGTGAGGCATCGTCGGTGCGGTATTTTTACGGAATGGC
ACGCGCACGTACTCTGCTGACGGTACGGTCCTGGCATTGTCGGAGGGCTT
TGCCCGTTGCGCCGCCAGATTCCACTCCCTGACATGCTGTGGAATATCTC
TTTCGCCGCGTCGGCCGGTTCGATCCCTCTGAACGGGTTCTTCCGGGCCA
GGTGGCCTACCGGCCGGGGGTAGATTGTAACATTAGGACCCTGTTTCGTC
AAGCGGTGACGTGTCATGCCACGCCAAACGCTGTTTGTATGGCAGCACGC
ATTGTCCCTCCTGCAGACGAGTGTCTTTTGTGCGCGAACCTATGTTCAAA
TACGCCCGAGCTTCGGGTAGTTTGCTGGTATCATCTGCTTTTCAATTAGT
CACGTTGGTTTGGAGTAGGACCCATTCACGTATGTATCTTCGTCTGCTCC
AGTGCTGTGTCACCAATGTAAATCCATGACCCACGCCCAACGATTAGCTC
TGTTTGCGAGCAAGATGTTGTTTGCCAAAGCCAGAAGAAAACCTGAGTAA
ACTTACTTCGTTGAACTATTGGGAAACAGTCACAACAAACACCACAACGA
CGGATGCTTCTCGTTTTTCAGGCAAAGCAGGTACGTTTTTGTGATATCCG
TGTGGAAATGATGCCGTAAAGCAGATATTTCCCTTTCATTAGGCTTGACT
GTGGACGAGATATATGGCGTTTTTTCGAAATCGAGTTTGGTGCCAATTTC
ATGCTCAACTTTTCAATTTCGTTATTATACGGGGAGAAGAAATCGAAAAT
GACATTGTGACTAATTTCAATTCGTGAAAAATTACGTTTGGCAGTACTAA
CGACTCGCAGTCATGGGTTGGAAATTATTTTTCCATTTTGGTCAAATGAG
TGAATTGACGGATACATTAGCAGGAACGATAGGTTATGCTCAGCAGCATA
CGTCAGGCTTGGTTTGATGATAGTCTGGTTCGTACTGGGGTGATTCACAG
CAAATCACCTCAAATAGAAAATAGATAATAGGCTGGTCGTTGATCGTTTG
CATTTGTCGTCTGCCTTTGCAGCCAGGCAATGGAACATGCCCCCCCCATC
AAGTTGGGATTGATAGAACCCCAGCGAAGTATACGCCTGCTCAGTTGATA
AAAAGGTACCGCTTGAGCTAGGTTCTGTAGTACTGGGGGTAGTGAAGCTC
TCCGGTTCAGGGTGGGTGTCCACCACCCGTTTCAACCCCGTTGCATTGGT
CGCTACTTAGTTCTTGTAAAGTTTGACTTGCCTGGACTTTCTTGATTTTC
GACGAAATAGGTCTTGGGAAACTTTCGAAAGTCGAAACATGAAATTCGAA
TATTCAGGGGTGATATAAGATGGTTGGATGCAAGCATCCAACCATGGCAT
TATGGATTTTACTTCACCGGTTGATACACGACCTTAGCCAGATATATGTC
GATCGAAGGTATCACATCAGTGGCCCGCTGTCATCGCCTCAGGAAGGGTT
GAAAAGACCCGGTGGAGATCGACTGGATCTCCCCGCCTTGAGCTTTAAAC
CACTCCCCGCTGAGTTGGATTAAAGGGAGGAATTATTGGTATCAATTCGC
GCAGCACACATGCCACTACGTATAACATTGTTTTCTGCGCTCCCTCCTCC
GCTTTTATATTTGTGTCCCAGCGGAAAGGAGTCGAACGATGACGTGCCTT
CGGTTGGAGATCATTCTTGTCAGATCTGTTTCGAACACGAGCACTCCACA
GTAATGCTACCGTGCGGTCACGGCGGCGTTTGTTGGGACTGCGGGGTGCA
GATGTTCGCGTTGACGGAGGAGTGTCCCATGTGCCGGAACAAGATCGACT
TGGTGCGTAGTAAAATGTCGGACTATATTTCTAGATCAGTGAATTACCGC
CGCAACAGTTGTTACAAGGATGATGGCCTGTTTGAATAGCCTCAACTTTT
ATGCCAATATTTTATTGTGTAGAGTACCCTACAAAACGGATAAATTGCCA
CAGGTTCCTGTAGAGGACAATACACCATTTTGACAGGACCGTTGAAATAT
TTGAAAATAAACAACACGTACGGGCTCGTGAAGAATAGTAAAGATTACTT
TTTTTATCACCGTAATGTTTCTTTTCCGTCAAGGCATCTCAATAATTTGT
ACTCCTGGGGTTCACCTGTCATGTATGGCGAGACACACCTACACCTTTCA
ATGTGCTTTGTGTCGCAACTTGCCATCACCCCGTTGATTGTGCCTCAGAC
CCTGAGAACCAGGCTTTTTTTATCCCACGAGGCATGTGTTGGCTGTTGCT
AGAGCTTTTACAACGGGTCCGGCTTGTCTTGACGGCGATGCGAGCTGACT
ATTGATTCATGAAGAGTATGGCTGTTATGCCTGTAACAGCCAACAATGTA
ATCTGTCGTGGTGTTAACGATCGTGAACAGCGTCTGGTTTGCATGCACCT
ATGGTGCGTTGTTTGAACAGCCGCAGAGTTGTGCCCTGATCCAGCTATTG
AAATAGAGCGCATGTACTTGTGCAGGTCATCGACCCAGTACTATACTGTC
AATCTTGAGTTCATTTATGTGACGCCCGTGTAGCCAGGGTTTGGGCAACC
GAACCTTACGTGTACTCAACCCATGACCCACGTACAGCCAGATACTGCGA
AATATTCAAATTCAATTTGTGCACGAGAACGGTGAGAAGGCCTCAGTACT
ACGGGGTAACGGGCGCTAAGGTTCCTAAACATAACCCACAACGTCGCCTC
TCGTGGCGTTGGGCAAAAATCGTTTTTCAATCAATCGCATACTATGATTC
TACTGCCATGACGACAAGTGTCTTCGATTGCAACCAAGACTAACTGCGTG
TACATTTTTGCAGGCATCAGTTATGTGAGGAGGCGGACTGGGAACTACCC
AGTGCGCACCTGTTTGCTGTTGATTTCTCAGTTACTTGCCTAGCCGGTAC
CCGGTTCTCACGAAATATCGGAGTGTTCTGTCGTGTTCGATGCCTCGAGG
CTTCGACGAGTTTGGGCTTATAGCGCTAGTGTCAATTCGTAAGTTTGGAG
ACGTGAGAGTGACAAAAAGGCGAGGGGAAATGGCTCGCTCAGTTCATGCC
TCCAACCAATTTGTAACAAAAACCAAGTTTGAACCATATTCATATCAAGA
ACAAAGTATTAAACCAGGAACTTCGAGAGCATTAGAGGAACCCTCGTAAC
CGTTACCGCAGTACCGTCAGTATCACGTGCATATTTATGCTGAAGAATCA
AAGGATCCAGATGGAAAAATCACCCAACATGCGCATGATTGGACACGTCG
TGTATGGTTTCATGGCGTTTTTGAGTATTGACTTCATGGCTCTTATCTCA
GTGTTGGCACAAACGCAGTGGCGCACATGTCGTAGCTCAAAGCATTACTT
CCTAAAGCGTGACGTGCTGTTGTGTTATTTTGGGCTGCTCCCATGCAGAA
GGGTGTTGCCACGAGGAAGTTCTGTCTTCTAACGGCGGTTCGTGACCGGG
CTACAGTGTTGAAAATATTAGGAAATAATATAACAGTCTGCTTTCCTCCG
GTTCGGTTGACTAGTTTTCCCGTTTCTTACATGCACCACTCAACACTATC
TTGCCGCCCTAATTACGGTGTTATAAAAAAGTAATGCCTCGCTGCCCATT
TGGAAGCCGTGCAGGACTAGTTTCATACTTGGCCACTACGGAACATCACA
ATCTTAGCTAGTTTTCGTGCTCATGCCATGTAGAAAGAAAAAAATCTCCA
AAAGGCGAACATGCCCTCCGTCCTCCCGAGCACGCATGGTCAACAGTCTT
GCAGCTACAGCATGCAAAAGATAACTACGTCCCCCGCTCCTTCTATCCCT
GTCAGGAGGTGAGATGCACTTATCAGCTCTCTTTCTTTTTTCCATGTATT
CGTCTTTTCCCTCGACTGTAAGCAACTTTTTTTTCTTGTCATTTCAAGAT
TCGATTTCAGCAGTATTCAGGAGAAAAAGGTTCTTGTCCGTTGCGACGTG
CAGATTCCAAACGTTATACTAAAGGGATTTTTTATCCTAGCCGGTGTGGA
GCTCAAATGATGACTGGCTACATGTTGAAATTCGCTGGAGTCGTTTGTAT
ATTGTGGGTGCTGATAGCAGGGCAACACTGCAGCATCGATCGTTCCTCTT
CGCCCTCAGTGTGATCAACACCGAGGACCTCCGCAAGCGGTAGCTGGCGT
GCGCGTTACGCTACCGCTCACTGTAGCCTGTAGTCGAAGGGCATGATCAT
TTGCGTCCCGCGTATCAATCAGAGTCTATCCAACAATTCATGCTGACATT
ATTTTCTGCCAGGCATAGTTTTCGCTTCGTAGAGAGCTCCTGAGACACAA
AAAACCAGCACAACCTCCAGGTCGAACCCGAAAACACAACATTTGATGCT
TGTCTGCGTCGTTTTTTTCTCGAGAAATAAAGTACATTGGATTCTCTTTC
GACAACACGTTTGTGGTTTTCTGGGAAAATTATTATCTCATGTACACTAA
CTTCATCTCGGAACCCTGTCCAGCCGTTTGTTTAACCTATGCAGCAAAAT
TCTTTGTCTCTATCGACGTATGAGCGTGTAACTGTTTCAATTTCAGACAA
GTTCTGCCGGTAGAGACACACTATCAATGCCTTATACCGCAGAAAACCTT
GTGTTTTTTCCTATAGAAACAATCGAGATTATGTCACTTTTCATTCCATG
ATGGCGAAGATCATGATCCGCTCGCGTTTAAAATAACACACACAAATTGC
TTCTGTAGGGGAGGTCAGACTTGAAATTTATCAAGTTCGAAGGAACGAGC
ATGTGCCCTTCGTGTGTTTGCTGGTCTCGCCTGTTGCTCCTTTTCTTATC
GTCTCTTTTCCTCTCCTCTGTGGTGCATGTTTATGTTTTTGTGTTCAAAA
CTAATTTTTGGCAGCTTGTCCGACTAGACTACGGGGATCGTCGCGAAGCA
CAAGACGAGCAATTCGTGTCGGTGATCTGTGCATAGTGGACAAAAGGTCA
CACTCGAAACAACCCAAGGAGTTGTGCGAGGATCGAAGAGGGAAACACCG
TAGGAGGCGTAGTTGTGCCCCATGGCGTCGTCTATGCCGTCAGACTGGCT
GCAGAGCACTCTCGAGTCTTCGTTTTCCTCTAGTAGAGCGCCGTCCGTCG
GAAAACCAATCGGTTGTTTGTTCCGAATCGACAGCTAACTGTTATGAATT
CCGCGGTCGACTGCTCCGCGGGCTTCGTGCTCAGATTGATGGTGGCGAAC
ATTTGTTGACGTGCCCTCCAGGCTGTCGTCTATGCGCGCCGGCTGACGAG
ACTGTGATGTGGCAGGAGTTGCTTCATAGTTTTTATTTCGAAAGTCGTTG
CCGCGTCAGATGATTGCGGGCTGGTGTTTATTCCTTTTTGTGTGTGAGCT
TTTTTGTAATATATTCCGTAAGACACGTCCCTGAACTGACGTTTTTCCAG
TATTTGTGGAAGCTCGCATGGTAATTTATAAAACAAGCGTTCACTCAGGA
GTGATGAGGCACGGTAGTAGCAAAAGATTGCCCCGATGAGTATCGTGTGC
AGGTCACTGGAATTTCCATTTGAGGGTACCCATTAGTGAATGTGGGGGCC
ATCCAACAAGGCACCTCCCGAAATAACCCACGCCAACTTTTTCAGGAGAG
AACCTTATATTTTCCTTCCCCAATCCGTCGTGCAATGTATTCTAGTAGAA
GAACATTGTCGTTTTGGTGACAAAGGTGTCCGCAGGCAAAGGCATCTGGG
TATCCCCCGTGTGGAGCAGATTTTTGCATACCTCGTTGTGTGTTTTTGGC
AATGCCTCGTTGCTTTCTTCGTGTGGGCGTGCCGCGCAGGGTTGGGGATA
TACATTTGTGTTGCTGGAGGAACTCGTCCTTCCACATGGTGGAGTTTGTC
ACGTGCTCATGCGACCAGAGAAATGGGCGTCATTGGCGGTCTTGTACGCT
GTTAATATATATATTTCGTTCGCCGCCCTCGATGTTGATGCAGCACTCGG
GTCCTCTTGTGTTGCAGTATTGTCTTTTTTGTTCGGTAGTCTTCGGTGGG
AATGTTTCTCTTTTTCCCCCTGGGTGTGCCGTGATAGATCGGGATACACA
ATTGTGCGTGTTGCATGATTGTCGAACTGTCCCTGTTATGTACAACGGTG
TAATTGATGTGTGTACTACACGATTGCTTGCGGTCACGCCGATGTGCAGG
AGGATGGGGTGGGGTGCTGAAATACTCAATGGTGAGGTGAAATAAAATAT
GTGTACTGTATAATTTTTCTTCGACACGCTGACCATTCGATAAAGGTAGT
TTATTGGCCCGAAGAATGCGGGTCGAATGATACCTCGATTAGCTGGCTGA
TGCCGGCACCGTAGCAAAGTGACAGAAGAACGCCGAGACATCAGCCAACT
CTTTTCTTTATTTTGTAGGGGAACTTGTGCACCCGTCCCTGCCCGCTGCG
TGATTCGCCCGCCAAATGTCTTAACAAGGTAGACCCATGCACACCTGGGC
AGAGGTTACCTTGTGAATACCTTTTTGCGGATATTACAACTTCCCCACGT
TGTGAGAGGATGGTGATGTGCACAAAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig4337:6030..15357+

>mRNA_H-paniculata_contig4337.11057.1 ID=mRNA_H-paniculata_contig4337.11057.1|Name=mRNA_H-paniculata_contig4337.11057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig4337:6030..15357+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTCCTTTAGTAGCTGCGATCGTTTTGGCGGGGGCCGCGGGAGCAGG
CCCGGTGCTCGTGAGCGATGCGTGTGGAACGGATACTACAGACAATGTAG
ACGCAAGGTGTGCCGTGGCGGAGGTCGAGCGCGTTATGAAGACGAAGCAA
CGCCCGAAAGAACTCAAGATGATTCCTTTAGTAGCTGCGATCGTTTTGGC
GGGGGCCGCGGGAGCAGGCCCGGTGCTCGTGAGCGATGCGTGTGGAACGG
ATACTACAGACAATGTAGACGCAAGGTGTGCCGTGGCGGAGGTCGAGCGC
GTTATGAAGACGAAGCAACGCCCGAAAGAACTCAAGGTTGAGACAGACGG
CAAGCTCTACTCCGTGCCGGAACAAGTCGAAATGGTGCAGCCGGCGGCGC
GGCCTTTGCTAGAAGGCTGGTGGCAGGTTGAGACAGACGGCAAGCTCTAC
TCCGTGCCGGAACAAGTCGAAATGGTGCAGCCGGCGGCGCGGCCTTTGCT
AGAAGGCTGGTGGCAGGAGTTCGTGGTGCGAGTTGCCACCCTTGTGAATC
GGAACGAAAAGGAGAAGTCGGTGGCGACCTCGGGATGCTGCAGTGCGATG
GAAATCAGGTGCCCAAGGAGTTCGTGGTGCGAGTTGCCACCCTTGTGAAT
CGGAACGAAAAGGAGAAGTCGGTGGCGACCTCGGGATGCTGCAGTGCGAT
GGAAATCAGGTGCCCAAGCGGAAAGGAGTCGAACGATGACGTGCCTTCGG
TTGGAGATCATTCTTGTCAGATCTGTTTCGAACACGAGCACTCCACAGTA
ATGCTACCGTGCGGTCACGGCGGCGTTTGTTGGGACTGCGGGGTGCAGAT
GTTCGCGTTGACGGAGGAGTGTCCCATGTGCCGGAACAAGATCGACTTGC
GGAAAGGAGTCGAACGATGACGTGCCTTCGGTTGGAGATCATTCTTGTCA
GATCTGTTTCGAACACGAGCACTCCACAGTAATGCTACCGTGCGGTCACG
GCGGCGTTTGTTGGGACTGCGGGGTGCAGATGTTCGCGTTGACGGAGGAG
TGTCCCATGTGCCGGAACAAGATCGACTTGCTTGTCCGACTAGACTACGG
GGATCGTCGCGAAGCACAAGACGAGCAATTCGTGTCGGTGATCTGTGCAT
AGCTTGTCCGACTAGACTACGGGGATCGTCGCGAAGCACAAGACGAGCAA
TTCGTGTCGGTGATCTGTGCATAG
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