mRNA_H-paniculata_contig43209.11028.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: A0A6A5LAB7_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LAB7_LUPAL) HSP 1 Score: 62.8 bits (151), Expect = 2.240e-11 Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 7 YILSHS---FGKLLSPVHFRRRITRPVSYYALFKGLLLLSKPP 126
Y + HS FGKLLSP +FRR+ RPVSYYALFKGLLLLS+PP
Sbjct: 9 YSIRHSHFHFGKLLSPKNFRRKTARPVSYYALFKGLLLLSEPP 51
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: A0A418V1F8_9DEIO (Uncharacterized protein n=1 Tax=Deinococcus cavernae TaxID=2320857 RepID=A0A418V1F8_9DEIO) HSP 1 Score: 60.5 bits (145), Expect = 1.570e-10 Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPISQT 156
LSP HFRR +TRPVSYYALF+G LLLS+PPGCL S T
Sbjct: 42 LSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDTSLT 81
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: C6J7T2_9BACL (Uncharacterized protein n=2 Tax=unclassified Paenibacillus TaxID=185978 RepID=C6J7T2_9BACL) HSP 1 Score: 58.5 bits (140), Expect = 3.530e-10 Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCL 135
L+P+HFRRR+TRPVSYYALFK LLLS+ PGCL
Sbjct: 4 LAPLHFRRRVTRPVSYYALFKWWLLLSQHPGCL 36
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: Q9RS75_DEIRA (Uncharacterized protein n=2 Tax=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) TaxID=243230 RepID=Q9RS75_DEIRA) HSP 1 Score: 60.5 bits (145), Expect = 4.840e-10 Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPISQT 156
LSP HFRR +TRPVSYYALF+G LLLS+PPGCL S T
Sbjct: 85 LSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDTSLT 124
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: I7J2P1_9BURK (Uncharacterized protein (Fragment) n=1 Tax=Taylorella asinigenitalis 14/45 TaxID=1091495 RepID=I7J2P1_9BURK) HSP 1 Score: 56.2 bits (134), Expect = 3.520e-9 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPIS 150
L+P+H RR TR VSYYA FKG LLLS+PP CL LP S
Sbjct: 13 LAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCLCLPTS 50
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: A0A6I7WGG5_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium HT1 TaxID=1916061 RepID=A0A6I7WGG5_9GAMM) HSP 1 Score: 56.2 bits (134), Expect = 4.240e-9 Identity = 27/46 (58.70%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPISQTHRWTIW 174
L+PV+ R+ TRPVSYYA FKG LLLS+PPGCL L S W
Sbjct: 13 LAPVNLPRKPTRPVSYYAFFKGWLLLSQPPGCLGLFTSFPTEHRFW 58
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: L9U5K2_9GAMM (Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 TaxID=1204738 RepID=L9U5K2_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 5.080e-9 Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPIS 150
L+P+H RR TR VSYYA FKG LLLS+PP CLSLP S
Sbjct: 58 LAPLHLPRRPTRLVSYYAFFKGWLLLSQPPSCLSLPTS 95
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: R6UK25_9FIRM (Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 TaxID=1262981 RepID=R6UK25_9FIRM) HSP 1 Score: 59.3 bits (142), Expect = 5.240e-9 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPIS 150
L+PVHFRRR+TR VS YALF+G LLLS+PP CL +P S
Sbjct: 179 LAPVHFRRRVTRLVSCYALFEGWLLLSQPPSCLCIPTS 216
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: A0A0H3KX17_BURM1 (Uncharacterized protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) TaxID=395019 RepID=A0A0H3KX17_BURM1) HSP 1 Score: 56.6 bits (135), Expect = 1.250e-8 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPIS 150
L+P+H RR TR VSYYA FKG LLLS+PP C SLP S
Sbjct: 83 LAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCFSLPTS 120
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Match: A0A0J8AWR0_BETVV (Uncharacterized protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8AWR0_BETVV) HSP 1 Score: 55.5 bits (132), Expect = 1.310e-8 Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 37 LSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPIS 150
L+P++ RR TRPVSYYA FKG LLLS+PPGCL L S
Sbjct: 40 LAPLNLPRRPTRPVSYYAFFKGWLLLSQPPGCLCLSTS 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig43209.11028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig43209.11028.1 >prot_H-paniculata_contig43209.11028.1 ID=prot_H-paniculata_contig43209.11028.1|Name=mRNA_H-paniculata_contig43209.11028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp IIYILSHSFGKLLSPVHFRRRITRPVSYYALFKGLLLLSKPPGCLSLPISback to top mRNA from alignment at H-paniculata_contig43209:1429..1626+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig43209.11028.1 ID=mRNA_H-paniculata_contig43209.11028.1|Name=mRNA_H-paniculata_contig43209.11028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=198bp|location=Sequence derived from alignment at H-paniculata_contig43209:1429..1626+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig43209:1429..1626+ >mRNA_H-paniculata_contig43209.11028.1 ID=mRNA_H-paniculata_contig43209.11028.1|Name=mRNA_H-paniculata_contig43209.11028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at H-paniculata_contig43209:1429..1626+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |