prot_H-paniculata_contig4300.10988.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4300.10988.1
Unique Nameprot_H-paniculata_contig4300.10988.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length234
Homology
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BLAST of mRNA_H-paniculata_contig4300.10988.1 vs. uniprot
Match: D8LLV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLV1_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.250e-79
Identity = 132/208 (63.46%), Postives = 156/208 (75.00%), Query Frame = 0 
Query:   26 GRMRYVPPPAQATPSKVSPPGKXXXXXXXXXTNAGAWARPQKAASSGPDKWAELAAKETAQLKAGKKMARAAMQQETSVGMSGNDKADILATKTEYDMWTKQDVNQVLAWSRAEQCRIPNKRVAKGGRLHKLINILLNNCDHVNERMSTEKRFADGSRDPSMPSGLELKRLFVAPLAKRVLNKVEEEEIEKSFKDDDPDSDDSEGMAM 233
            G+M+YVPPP                      TNAGAW RP KA   GP +W ELA KE AQLKA KK+ RA  +Q  SVGMSGNDKADI ATK E+D+WTK DV +   W++AE+CRIPNKRVAKGGRLHK INILLNNC+ ++ER+++EKR+ D  RDP++PSGL+LKR FVAPLAKRVLNKVE+EE E++FKDDDPDSDDSEG AM
Sbjct:   54 GKMKYVPPP----------------------TNAGAWNRP-KATGQGPCQWKELADKEDAQLKASKKVMRAEAKQNNSVGMSGNDKADIAATKMEFDLWTKTDVTKTRNWAKAEECRIPNKRVAKGGRLHKFINILLNNCEFISERLASEKRYQDACRDPTLPSGLDLKRQFVAPLAKRVLNKVEDEENEQAFKDDDPDSDDSEGRAM 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4300.10988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLV1_ECTSI3.250e-7963.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4300contigH-paniculata_contig4300:5385..14463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4300.10988.1mRNA_H-paniculata_contig4300.10988.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4300 5370..16152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4300.10988.1 ID=prot_H-paniculata_contig4300.10988.1|Name=mRNA_H-paniculata_contig4300.10988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
MSSSWTKGAPQNKTKSSAPTPKAGGGRMRYVPPPAQATPSKVSPPGKAKM
KYVPPPTNAGAWARPQKAASSGPDKWAELAAKETAQLKAGKKMARAAMQQ
ETSVGMSGNDKADILATKTEYDMWTKQDVNQVLAWSRAEQCRIPNKRVAK
GGRLHKLINILLNNCDHVNERMSTEKRFADGSRDPSMPSGLELKRLFVAP
LAKRVLNKVEEEEIEKSFKDDDPDSDDSEGMAM*
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