mRNA_H-paniculata_contig429.10964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig429.10964.1
Unique NamemRNA_H-paniculata_contig429.10964.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 1.240e-172
Identity = 211/251 (84.06%), Postives = 230/251 (91.63%), Query Frame = 1
Query:    1 VCGDSGCSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLAK 753
            V G++GCSLFNWCNGHGTCNT   TCTCYEGWGADTD+TLYRAADCSARVCP+GKAWGD+PTGSL+AHQ QECSGRG+CDRDSGEC CFDGF+G ACERSGCP++CS HGRCVNMKALA  SDALPLSN+TTY+GEDD+VTWDEEMI+GCVCDS WEVGLG GQTQEPEWFGPDCSLRHCPSGDDPST  DETDC+NVTS SVY G  G +GNLCHVDC+NRGTCDY TGLCEC+TGYYG+NC QQSVLAK
Sbjct:   19 VQGNAGCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLYRAADCSARVCPAGKAWGDVPTGSLSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSGEDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQSVLAK 269          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A7S1CQ07_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ07_9STRA)

HSP 1 Score: 327 bits (839), Expect = 3.750e-110
Identity = 146/245 (59.59%), Postives = 178/245 (72.65%), Query Frame = 1
Query:   37 CNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPL---SNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCY----NVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
            CNGHGTCNTA + C CY+GWG+ +DVT YRA DCS RVCPSG AW D  T + TAH + ECS  GICDR +G+C CF G+ G AC+RS CPNECSGHG+CV++  +A+ ++A P+   S   TY G +   TWDE+ I+GCVCDSSW V L  G TQEPEWFG DCSLRHC SGDDP T  DETDC     N  +++  TG  G++GNLCHVDCANRG C+Y+TG+C+C+ G+YG  C  QS LA
Sbjct:   36 CNGHGTCNTATTQCACYDGWGSSSDVTTYRAPDCSKRVCPSGNAWADAATATNTAHALAECSNAGICDRTTGKCRCFTGYDGEACQRSACPNECSGHGKCVSIAQMASENNAQPVDIESPAFTYGGSEAVATWDEDKIFGCVCDSSWTVSLASGATQEPEWFGADCSLRHCASGDDPMTTADETDCVGKVRNGQTVAGRTG--GVAGNLCHVDCANRGICNYNTGICDCFDGFYGVACTLQSELA 278          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A8J2X5G2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G2_9STRA)

HSP 1 Score: 325 bits (833), Expect = 1.440e-109
Identity = 148/246 (60.16%), Postives = 173/246 (70.33%), Query Frame = 1
Query:   19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVD-DETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLAK 753
            C   N+CNGHG C  A  TC CYEGWGA TDV LY+  DCS R CPSG AW D+ + S TAH   ECSG+G C++ +G C C  GFSG AC+R GC  +CSGHG+CV+MK +AT  +ALPLS   TYTG + +  WD++ IYGCVCDSSW VGLG GQ QEPEWFGP CSLRHCPSGDDP T   DET+C  VT+   Y    G  GNLC VDCANRG CD +TG C C+TG YG++C   S LA+
Sbjct:   18 CIDMNFCNGHGHCEPATDTCDCYEGWGAKTDVALYKLHDCSGRTCPSGPAWADVASDSKTAHAPAECSGKGTCNKATGTCKCVSGFSGDACQRFGCLYDCSGHGQCVSMKKMATMPNALPLSKPATYTGLETTERWDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVTAAGGY--GVGEKGNLCQVDCANRGKCDTETGECSCWTGSYGHDCTLLSALAR 261          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL)

HSP 1 Score: 323 bits (827), Expect = 5.910e-109
Identity = 139/237 (58.65%), Postives = 170/237 (71.73%), Query Frame = 1
Query:   37 CNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
            CNGHG CNTA  TCTC+EG+GA TDV +Y+A DCS RVCP+G +WG IPT    AH + ECS  G+CDR SG+C C+ G+ G AC+RS C N CSGHGRCV+M+ +AT + A PLS   TY G +D+ TWD+  I+GC+CDSSW VGLG GQ Q+ EWFGPDCSL  CP+GDDP T  DETDC   T+    + + G  GN CHVDCANRG CDY +G C C++G+YG NC   S +
Sbjct:    5 CNGHGRCNTATKTCTCFEGYGAATDVAVYKAPDCSQRVCPAGPSWGGIPTDETVAHALAECSDMGVCDRSSGQCKCYRGYEGSACQRSTCLNGCSGHGRCVSMREMATITSAFPLSPAATYEGAEDTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKTATD--STSVGQPGNRCHVDCANRGICDYTSGTCMCFSGFYGSNCASLSPV 239          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A835YN50_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN50_9STRA)

HSP 1 Score: 323 bits (829), Expect = 2.360e-108
Identity = 145/258 (56.20%), Postives = 175/258 (67.83%), Query Frame = 1
Query:   16 GCSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLS-NITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDET-----------DCYNVTSLSVYT-GARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
            GC   N CNGHG C+   + C CYEGWGAD+D++LY+A DCSARVCPSG AWGD+PT   TAH   ECSG G+CDRDSG C CF GF G AC+R  CPN CSGHGRC+++K +    +ALPLS N   Y G++ + TWDE+ I+GCVCDSSW VGL   +TQ  EWFGPDCSLRHCPSG+DP+ +               +C  V +  V    + G  GNLCHVDC+ RG CDY TG+C+C+ GYYG NC    VLA
Sbjct:   38 GCDQHNNCNGHGVCSQQDAVCLCYEGWGADSDISLYKAQDCSARVCPSGPAWGDVPTAKYTAHAALECSGMGLCDRDSGVCRCFTGFEGDACQRMACPNNCSGHGRCMSLKNMVNEPNALPLSSNAHEYGGDELATTWDEDRIFGCVCDSSWAVGLKATETQAVEWFGPDCSLRHCPSGNDPAQLQLTPAHPAEKPILTINCEGVATPGVVEKDSEGAEGNLCHVDCSGRGVCDYATGVCQCFNGYYGQNCGTVDVLA 295          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: W2Q018_PHYPN (EGF-like domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q018_PHYPN)

HSP 1 Score: 315 bits (806), Expect = 2.950e-105
Identity = 135/243 (55.56%), Postives = 171/243 (70.37%), Query Frame = 1
Query:   19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
            C+  N CN HG C+    TCTCYEG+GA TD+T YR+ DCS R+CP+G +WG IPT +  +H  +ECSG G+CDR +G C C+ GF G AC+RS CPN CSGHG+C++M+ LA A  A PLS  T Y G+  + TWD++ I GC+CDSSW VGLG G++Q  ++FGPDCS  HCPSGDDP T  DETDC  V  ++   G  G   NLCHVDCANRG C+Y++G C C++G+YG NC   S L
Sbjct:   34 CAALNNCNAHGRCDALTKTCTCYEGFGAPTDITNYRSPDCSLRICPAGPSWGGIPTSATISHPKEECSGAGVCDRTTGTCICYYGFEGSACQRSSCPNSCSGHGQCLSMRELAAAPSAFPLSPPTKYEGDVTATTWDQDRIQGCLCDSSWPVGLGAGESQLSQYFGPDCSRMHCPSGDDPMTAVDETDCEGV--VADGGGGTGAPDNLCHVDCANRGICNYNSGECSCFSGFYGSNCASLSPL 274          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP)

HSP 1 Score: 315 bits (806), Expect = 3.050e-105
Identity = 134/244 (54.92%), Postives = 169/244 (69.26%), Query Frame = 1
Query:   19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
            C+  + CN HG C+    TC C EG+GA TD+T YR+ DCS R CP+G +WG IPT + T+H   ECS  G+CDR +G C C+ G+ G AC+RS CPN CSGHG+C++M+ LAT + A PLS  TTY G+  + TWD++ I GC+CDS W VGLG G++Q  +WFGPDCS  HCPSGDDP T +DETDC  V +        G +GNLCHVDCANRG CDY +G+C C+ G+YG NC   S LA
Sbjct:   35 CAALSNCNAHGRCDALTKTCECNEGYGASTDITNYRSPDCSLRTCPAGPSWGGIPTSATTSHAKAECSDAGVCDRSTGTCMCYYGYEGSACQRSTCPNGCSGHGQCLSMRELATETSAFPLSPATTYGGDVTATTWDQDRIQGCLCDSYWPVGLGAGESQLSQWFGPDCSRMHCPSGDDPMTAEDETDCEGVVAAGGV--GPGAAGNLCHVDCANRGICDYSSGVCSCFPGFYGSNCASLSPLA 276          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.040e-104
Identity = 138/246 (56.10%), Postives = 169/246 (68.70%), Query Frame = 1
Query:   19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCS--ARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
            C+  N CN HG C+    TCTCYEG+GA TDVT YR+ DCS   R CP+G +WG IPT + T+H   ECSG GICDR SG C C+ G+ G AC+RS CPN CSGHG+C++M+ +A  S A PLS  T Y G+  + TWD++ I GC+CDSSW VGLG G++Q  ++FGPDCS  HCPSGDDP T  DETDC  +  ++   G  G + NLCHVDCANRG CDY  G C C+ G+YG NC   S LA
Sbjct:   28 CASLNNCNAHGRCDALTKTCTCYEGFGAPTDVTNYRSPDCSLRTRTCPAGPSWGGIPTSATTSHPKAECSGAGICDRSSGTCICYYGYEGSACQRSSCPNSCSGHGQCLSMREMAMESSAFPLSPPTKYEGDVTATTWDQDRIQGCLCDSSWPVGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGI--IAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYGSNCASLSPLA 271          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A833WEK2_PHYIN (EGF-like domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WEK2_PHYIN)

HSP 1 Score: 312 bits (800), Expect = 2.410e-104
Identity = 135/245 (55.10%), Postives = 170/245 (69.39%), Query Frame = 1
Query:   19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSG--NLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
            C+  N CN HG C+    TCTCYEG+GA TD+T YR+ DCS R CP+G +WG IP  + T+H  +ECSG G+CDR++G C C+ G+ G AC+RS CPN CSGHG+C++M+ LA    A PLS  T Y G+  + TWD++ I GC+CDS+W VGLG G++Q  ++FGPDCS  HCPSGDDP T  DET C  +    V TG  G  G  NLCHVDCANRG CDY+TG C C++G+YG NC   S L
Sbjct:   34 CAALNNCNAHGRCDALTKTCTCYEGFGAPTDITNYRSPDCSMRTCPAGPSWGGIPNSATTSHPKEECSGAGVCDRNTGTCFCYYGYEGSACQRSSCPNSCSGHGQCMSMRELAVEPSAFPLSPPTKYEGDVRATTWDQDRIQGCLCDSTWPVGLGAGESQLSQYFGPDCSKMHCPSGDDPMTAVDETKCVGI----VATGGAGTGGPDNLCHVDCANRGICDYNTGECSCFSGFYGSNCASLSPL 274          
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A5D6XZL0_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZL0_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.980e-103
Identity = 135/243 (55.56%), Postives = 168/243 (69.14%), Query Frame = 1
Query:   19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
            CS  + CNGHG C TA  TC C+EG+GA +D+T Y++ DCS RVCPSG +W  IPT + +AH   ECS  G CDR SG+C CF G+ G AC+R  CPN CSGHG+CV+M+A+A  ++A PLS  TTY G + + TWD+  I+GCVCDSSW+VGL  GQ Q  +WFG DCSL  CPSGDDP T  DETDC     L+      G +GN CH+DC+NRG CDY TG C C++G+YG NC   S +
Sbjct:   24 CSALSNCNGHGRCVTASKTCICFEGYGATSDITSYKSPDCSKRVCPSGPSWAGIPTAANSAHPRTECSDAGYCDRSSGQCRCFAGYDGAACQRYACPNGCSGHGQCVSMQAMAELTNAAPLSAATTYAGAEATTTWDQNRIFGCVCDSSWDVGLAAGQRQSSQWFGADCSLMRCPSGDDPMTTVDETDCGG--KLAPGGVGTGETGNKCHIDCSNRGKCDYTTGTCACFSGFYGSNCASLSPV 264          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYV5_ECTSI1.240e-17284.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CQ07_9STRA3.750e-11059.59Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A8J2X5G2_9STRA1.440e-10960.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1CPX8_PYTOL5.910e-10958.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835YN50_9STRA2.360e-10856.20EGF-like domain-containing protein n=1 Tax=Tribone... [more]
W2Q018_PHYPN2.950e-10555.56EGF-like domain-containing protein n=10 Tax=Phytop... [more]
G5A2N6_PHYSP3.050e-10554.92EGF-like domain-containing protein n=4 Tax=Phytoph... [more]
A0A2P4X7I9_9STRA1.040e-10456.10EGF-like domain-containing protein n=1 Tax=Phytoph... [more]
A0A833WEK2_PHYIN2.410e-10455.10EGF-like domain n=1 Tax=Phytophthora infestans Tax... [more]
A0A5D6XZL0_9STRA1.980e-10355.56EGF-like domain-containing protein n=1 Tax=Pythium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig429contigH-paniculata_contig429:7172..10237 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score484.6
Seed ortholog evalue2.9e-134
Seed eggNOG ortholog2880.D7FYV5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.EGF-like domain
EggNOG OGs2A4YC@1,2RY8D@2759
Ec32 ortholog descriptionSecreted EGF-like domain protein
Ec32 orthologEc-19_002620.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size756
Cds size756
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig429.10964.1prot_H-paniculata_contig429.10964.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig429 7172..10237 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930304.2670891-CDS-H-paniculata_contig429:7171..72451622930304.2670891-CDS-H-paniculata_contig429:7171..7245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 7172..7245 +
1691481233.4087698-CDS-H-paniculata_contig429:7171..72451691481233.4087698-CDS-H-paniculata_contig429:7171..7245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 7172..7245 +
1622930304.287707-CDS-H-paniculata_contig429:7583..77361622930304.287707-CDS-H-paniculata_contig429:7583..7736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 7584..7736 +
1691481233.419218-CDS-H-paniculata_contig429:7583..77361691481233.419218-CDS-H-paniculata_contig429:7583..7736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 7584..7736 +
1622930304.30805-CDS-H-paniculata_contig429:8201..83771622930304.30805-CDS-H-paniculata_contig429:8201..8377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 8202..8377 +
1691481233.428525-CDS-H-paniculata_contig429:8201..83771691481233.428525-CDS-H-paniculata_contig429:8201..8377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 8202..8377 +
1622930304.3257446-CDS-H-paniculata_contig429:9005..92261622930304.3257446-CDS-H-paniculata_contig429:9005..9226Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 9006..9226 +
1691481233.4382188-CDS-H-paniculata_contig429:9005..92261691481233.4382188-CDS-H-paniculata_contig429:9005..9226Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 9006..9226 +
1622930304.3468657-CDS-H-paniculata_contig429:10105..102371622930304.3468657-CDS-H-paniculata_contig429:10105..10237Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 10106..10237 +
1691481233.4474082-CDS-H-paniculata_contig429:10105..102371691481233.4474082-CDS-H-paniculata_contig429:10105..10237Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig429 10106..10237 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig429.10964.1

>prot_H-paniculata_contig429.10964.1 ID=prot_H-paniculata_contig429.10964.1|Name=mRNA_H-paniculata_contig429.10964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
VCGDSGCSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARV
CPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERS
GCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGC
VCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTS
LSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA
K*
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mRNA from alignment at H-paniculata_contig429:7172..10237+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig429.10964.1 ID=mRNA_H-paniculata_contig429.10964.1|Name=mRNA_H-paniculata_contig429.10964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3066bp|location=Sequence derived from alignment at H-paniculata_contig429:7172..10237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTATGCGGCGACTCTGGATGCTCCCTCTTCAACTGGTGCAATGGCCATGG GACTTGCAACACAGCAATAAGCACGTGAGACTTGATCATACTACTCTCTT GCATCGAGACAATATTTCTTCCTGATAGACGGTGCTTGACCTGATGATTG TCCCTGGTCTCCTCCCTTGGATGCGCGCCATCGTGGAAATTTATATCACC AGATGGAGGAAACCAGCGGACGCATATCCACCCGGGCTCTATACTCGCGT TCATACGATCAATCTTCTCGTTCTTTGTGTTCATTGCGATCTTTCTGGTC TTAATCCAGAGGACCTGAAATTGCGAGGAGCTCCACCCTTTTTAGATCGA GATGGGTTGAAATTTTTCTGAACAAACGCACGCATAGCCCTCCTACCACT GCTGTGCTCCAGATGCACATGCTACGAGGGTTGGGGTGCGGACACTGACG TGACGTTGTACAGAGCGGCAGACTGCTCAGCAAGAGTTTGTCCTTCCGGG AAGGCGTGGGGAGATATCCCAACGGGATCCTTGACAGCACATCAGGTGCA GGAGTGTTCTGGCAGGTGACAAGGCCCAAAATGATGAGTCCAATGATGGT GTGCCATATGCGTAATATTGACATAAAATCACGGGATGGTGTTCGCGCTT CCTTTTAAAATCTGTTTAGTCACGTTTAGAGTACATCGTGTTGCGCGTTG GGTGGTCAGCACTCTGAATTACATTGGAACGTGGACGAACTCGCTCCTCG CGGGATCAAGTAAGTGCACAACATCAGAAATTCTTTTAGCACAAATTAAT AGCACGATAAATAACCATTTTTTCTTTCACGATGTGTACGATGTGTACGA TGTGTACGATGTGTACGATGTGTACGGTGTGTTTGGTCTCACAGAACCGT ATCATGAAACCTGCGAGTAGCGATTGGTTAAACACGAAGGCCATGTATCG CACCTCGCGTAGCCCACAGGTGTCAGAGTTCTATTTTTTCATCTCTTACC GTACGCACCACCTTGCTTCCGCACACACAGAGGAATTTGTGATCGAGATA GCGGCGAATGCGCGTGTTTCGATGGCTTTTCGGGAGGGGCTTGCGAACGA TCGGGCTGCCCGAACGAATGCTCAGGCCACGGACGCTGTGTGAACATGAA GGCCTTGGCAACAGCCTCAGACGCGCTACCACTATCCAATATCACCACTT ACACTGGTGGGAGTTACATTCAAACAACATTGATATCTAATGGAATTCAA AGGGGGATCAGATGGGCAACAATCAAGAAAAACACTTGTAGATATTTTCC CATCGATCAAGCAAGGCCGGAAAGCCAGCCGATGTGGTTGCGATGTACGA CATTGTTGACATCTATGAAATCGTATGAGACTTCAGCGGGGGGACTTTCT GCGCTCAGAGCGCAAGATATTGCTTGAGGAGCATTGCTTGAGTGACATGT ATTGATTGTTGAGGAGCATTGCTTGAGTGACATGTATTGTTAATGGTTTA GGGTAATTCCTACCAGGCACGTTTTTGGCGGGAAAACGGAAAGTTTTGTC ATTTCAAAGATTTTCAACCTTTCAAATAAGAGCTGCAATGTACCCAACAG AAGTGTCAACCATTTCGTCGAGTTTTGCTACCAATAATATGGAAAATTTC ACATTTCTGATCTAATATTGTCCCTTATTTAAGCGCCCGAAATTTTAGTA GTTGACTAATTTCCGTTTTTCGGCAAAAAAACGCGAAAACCCTTAGAGCT GCGAGCTTCAAGGTAATTCCTCCATCCCCCACCGGAAACGAACTTTCGGC CACTGCTCCTCTCTGATTCTTTCCCGTGTCGTAGGAGAGGATGACTCGGT GACATGGGACGAGGAGATGATTTACGGATGCGTTTGCGACTCTTCGTGGG AGGTGGGGCTGGGGTTTGGACAGACGCAGGAACCAGAGTGGTTTGGCCCG GATTGTTCGCTGAGGCATTGCCCAAGCGGGGATGACCCCAGCACTGTCGA CGACGAGACGGATTGCTATAACGTTACGTCTTTGTCTGTGTACACTGGTG CCAGGGTGAGGTTATTGTAAGACTATTATTCTACCAGGTTAGCCAGCAGT AGGAGAGACGGATGACTTCTCGTTGTCATGCGGAATTCTACCATTTGGAA TGTAGTAATTTCATTTTGGAGTTACATTGATTGTATTTCTGTTTGATGTA CCTTTTGCCTTCCTCTTAATAATCAGTAACGCACACTTTATTAACAGAGG AGATGAGTACGCGCCTTTTCCAACACCTGAACCACACAGCATTCTACCAG AGCTGGAGAGATCGACGGTAGTAATGAATACGTGTGCTCGGGGAGCGAGT TGGTTGCAGAATCATGTTTACTGAGGGGAATCTGGTTTACCGCGCCCGTC AAATTGACCAGTAGAATTCACCCCTGTTTATCCTTCGAAACCCGAGGTTG ATACAATACTTGGTCTTAGTGTTTTGTCGCTGCCGGAATCCTTCTCAGCA TTTCAGTTAGTTTATGGCCGCGCCACCGAGTGACGCAGCTTTTCTGGCGT TCGCATGCCCACCGGGCCCAATTGACCCAATTTTACGTGCTCGGTGTGAA GATTAGGGTCGAGTGGAGTTGCAAATTTACCTGACACATGACTTGGCATA TATAGCAAACATCACGCACAAGTATTTTTACGAACTGGGGTGATTTCGCA TCAAAGGCAAGCATCGCGAACGCCGAGATGATTGGATACGCAATCTTACC TTGTCACGTTGAATTTGTATATCTTGTCGCAGGCAAATTTCATTTATCCC GTCTCCGTTGTACCTATGGGAGCAAACTTGGGAACAATCGCGACTGGAGT TGGGGCTCTTCAGCTGTGACAATAACTTGACGGCTATTCTCGCTTGCTTT ATTCGGCCTAACCGCATCACCCCCACTCCCTCAGGGTCTTTCGGGAAACC TTTGCCATGTGGACTGCGCCAACAGGGGCACCTGTGACTATGACACGGGG CTTTGCGAGTGCTACACGGGCTACTATGGGTATAACTGTCAGCAGCAGTC TGTCCTCGCCAAGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig429:7172..10237+

>mRNA_H-paniculata_contig429.10964.1 ID=mRNA_H-paniculata_contig429.10964.1|Name=mRNA_H-paniculata_contig429.10964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig429:7172..10237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTATGCGGCGACTCTGGATGCTCCCTCTTCAACTGGTGCAATGGCCATGG
GACTTGCAACACAGCAATAAGCACGTATGCGGCGACTCTGGATGCTCCCT
CTTCAACTGGTGCAATGGCCATGGGACTTGCAACACAGCAATAAGCACAT
GCACATGCTACGAGGGTTGGGGTGCGGACACTGACGTGACGTTGTACAGA
GCGGCAGACTGCTCAGCAAGAGTTTGTCCTTCCGGGAAGGCGTGGGGAGA
TATCCCAACGGGATCCTTGACAGCACATCAGGTGCAGGAGTGTTCTGGCA
GATGCACATGCTACGAGGGTTGGGGTGCGGACACTGACGTGACGTTGTAC
AGAGCGGCAGACTGCTCAGCAAGAGTTTGTCCTTCCGGGAAGGCGTGGGG
AGATATCCCAACGGGATCCTTGACAGCACATCAGGTGCAGGAGTGTTCTG
GCAGAGGAATTTGTGATCGAGATAGCGGCGAATGCGCGTGTTTCGATGGC
TTTTCGGGAGGGGCTTGCGAACGATCGGGCTGCCCGAACGAATGCTCAGG
CCACGGACGCTGTGTGAACATGAAGGCCTTGGCAACAGCCTCAGACGCGC
TACCACTATCCAATATCACCACTTACACTGAGGAATTTGTGATCGAGATA
GCGGCGAATGCGCGTGTTTCGATGGCTTTTCGGGAGGGGCTTGCGAACGA
TCGGGCTGCCCGAACGAATGCTCAGGCCACGGACGCTGTGTGAACATGAA
GGCCTTGGCAACAGCCTCAGACGCGCTACCACTATCCAATATCACCACTT
ACACTGGAGAGGATGACTCGGTGACATGGGACGAGGAGATGATTTACGGA
TGCGTTTGCGACTCTTCGTGGGAGGTGGGGCTGGGGTTTGGACAGACGCA
GGAACCAGAGTGGTTTGGCCCGGATTGTTCGCTGAGGCATTGCCCAAGCG
GGGATGACCCCAGCACTGTCGACGACGAGACGGATTGCTATAACGTTACG
TCTTTGTCTGTGTACACTGGTGCCAGGGAGAGGATGACTCGGTGACATGG
GACGAGGAGATGATTTACGGATGCGTTTGCGACTCTTCGTGGGAGGTGGG
GCTGGGGTTTGGACAGACGCAGGAACCAGAGTGGTTTGGCCCGGATTGTT
CGCTGAGGCATTGCCCAAGCGGGGATGACCCCAGCACTGTCGACGACGAG
ACGGATTGCTATAACGTTACGTCTTTGTCTGTGTACACTGGTGCCAGGGG
TCTTTCGGGAAACCTTTGCCATGTGGACTGCGCCAACAGGGGCACCTGTG
ACTATGACACGGGGCTTTGCGAGTGCTACACGGGCTACTATGGGTATAAC
TGTCAGCAGCAGTCTGTCCTCGCCAAGTAGGGTCTTTCGGGAAACCTTTG
CCATGTGGACTGCGCCAACAGGGGCACCTGTGACTATGACACGGGGCTTT
GCGAGTGCTACACGGGCTACTATGGGTATAACTGTCAGCAGCAGTCTGTC
CTCGCCAAGTAG
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