mRNA_H-paniculata_contig429.10964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 1.240e-172 Identity = 211/251 (84.06%), Postives = 230/251 (91.63%), Query Frame = 1
Query: 1 VCGDSGCSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLAK 753
V G++GCSLFNWCNGHGTCNT TCTCYEGWGADTD+TLYRAADCSARVCP+GKAWGD+PTGSL+AHQ QECSGRG+CDRDSGEC CFDGF+G ACERSGCP++CS HGRCVNMKALA SDALPLSN+TTY+GEDD+VTWDEEMI+GCVCDS WEVGLG GQTQEPEWFGPDCSLRHCPSGDDPST DETDC+NVTS SVY G G +GNLCHVDC+NRGTCDY TGLCEC+TGYYG+NC QQSVLAK
Sbjct: 19 VQGNAGCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLYRAADCSARVCPAGKAWGDVPTGSLSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSGEDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQSVLAK 269
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A7S1CQ07_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ07_9STRA) HSP 1 Score: 327 bits (839), Expect = 3.750e-110 Identity = 146/245 (59.59%), Postives = 178/245 (72.65%), Query Frame = 1
Query: 37 CNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPL---SNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCY----NVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
CNGHGTCNTA + C CY+GWG+ +DVT YRA DCS RVCPSG AW D T + TAH + ECS GICDR +G+C CF G+ G AC+RS CPNECSGHG+CV++ +A+ ++A P+ S TY G + TWDE+ I+GCVCDSSW V L G TQEPEWFG DCSLRHC SGDDP T DETDC N +++ TG G++GNLCHVDCANRG C+Y+TG+C+C+ G+YG C QS LA
Sbjct: 36 CNGHGTCNTATTQCACYDGWGSSSDVTTYRAPDCSKRVCPSGNAWADAATATNTAHALAECSNAGICDRTTGKCRCFTGYDGEACQRSACPNECSGHGKCVSIAQMASENNAQPVDIESPAFTYGGSEAVATWDEDKIFGCVCDSSWTVSLASGATQEPEWFGADCSLRHCASGDDPMTTADETDCVGKVRNGQTVAGRTG--GVAGNLCHVDCANRGICNYNTGICDCFDGFYGVACTLQSELA 278
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A8J2X5G2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G2_9STRA) HSP 1 Score: 325 bits (833), Expect = 1.440e-109 Identity = 148/246 (60.16%), Postives = 173/246 (70.33%), Query Frame = 1
Query: 19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVD-DETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLAK 753
C N+CNGHG C A TC CYEGWGA TDV LY+ DCS R CPSG AW D+ + S TAH ECSG+G C++ +G C C GFSG AC+R GC +CSGHG+CV+MK +AT +ALPLS TYTG + + WD++ IYGCVCDSSW VGLG GQ QEPEWFGP CSLRHCPSGDDP T DET+C VT+ Y G GNLC VDCANRG CD +TG C C+TG YG++C S LA+
Sbjct: 18 CIDMNFCNGHGHCEPATDTCDCYEGWGAKTDVALYKLHDCSGRTCPSGPAWADVASDSKTAHAPAECSGKGTCNKATGTCKCVSGFSGDACQRFGCLYDCSGHGQCVSMKKMATMPNALPLSKPATYTGLETTERWDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVTAAGGY--GVGEKGNLCQVDCANRGKCDTETGECSCWTGSYGHDCTLLSALAR 261
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 323 bits (827), Expect = 5.910e-109 Identity = 139/237 (58.65%), Postives = 170/237 (71.73%), Query Frame = 1
Query: 37 CNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
CNGHG CNTA TCTC+EG+GA TDV +Y+A DCS RVCP+G +WG IPT AH + ECS G+CDR SG+C C+ G+ G AC+RS C N CSGHGRCV+M+ +AT + A PLS TY G +D+ TWD+ I+GC+CDSSW VGLG GQ Q+ EWFGPDCSL CP+GDDP T DETDC T+ + + G GN CHVDCANRG CDY +G C C++G+YG NC S +
Sbjct: 5 CNGHGRCNTATKTCTCFEGYGAATDVAVYKAPDCSQRVCPAGPSWGGIPTDETVAHALAECSDMGVCDRSSGQCKCYRGYEGSACQRSTCLNGCSGHGRCVSMREMATITSAFPLSPAATYEGAEDTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKTATD--STSVGQPGNRCHVDCANRGICDYTSGTCMCFSGFYGSNCASLSPV 239
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A835YN50_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN50_9STRA) HSP 1 Score: 323 bits (829), Expect = 2.360e-108 Identity = 145/258 (56.20%), Postives = 175/258 (67.83%), Query Frame = 1
Query: 16 GCSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLS-NITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDET-----------DCYNVTSLSVYT-GARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
GC N CNGHG C+ + C CYEGWGAD+D++LY+A DCSARVCPSG AWGD+PT TAH ECSG G+CDRDSG C CF GF G AC+R CPN CSGHGRC+++K + +ALPLS N Y G++ + TWDE+ I+GCVCDSSW VGL +TQ EWFGPDCSLRHCPSG+DP+ + +C V + V + G GNLCHVDC+ RG CDY TG+C+C+ GYYG NC VLA
Sbjct: 38 GCDQHNNCNGHGVCSQQDAVCLCYEGWGADSDISLYKAQDCSARVCPSGPAWGDVPTAKYTAHAALECSGMGLCDRDSGVCRCFTGFEGDACQRMACPNNCSGHGRCMSLKNMVNEPNALPLSSNAHEYGGDELATTWDEDRIFGCVCDSSWAVGLKATETQAVEWFGPDCSLRHCPSGNDPAQLQLTPAHPAEKPILTINCEGVATPGVVEKDSEGAEGNLCHVDCSGRGVCDYATGVCQCFNGYYGQNCGTVDVLA 295
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: W2Q018_PHYPN (EGF-like domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q018_PHYPN) HSP 1 Score: 315 bits (806), Expect = 2.950e-105 Identity = 135/243 (55.56%), Postives = 171/243 (70.37%), Query Frame = 1
Query: 19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
C+ N CN HG C+ TCTCYEG+GA TD+T YR+ DCS R+CP+G +WG IPT + +H +ECSG G+CDR +G C C+ GF G AC+RS CPN CSGHG+C++M+ LA A A PLS T Y G+ + TWD++ I GC+CDSSW VGLG G++Q ++FGPDCS HCPSGDDP T DETDC V ++ G G NLCHVDCANRG C+Y++G C C++G+YG NC S L
Sbjct: 34 CAALNNCNAHGRCDALTKTCTCYEGFGAPTDITNYRSPDCSLRICPAGPSWGGIPTSATISHPKEECSGAGVCDRTTGTCICYYGFEGSACQRSSCPNSCSGHGQCLSMRELAAAPSAFPLSPPTKYEGDVTATTWDQDRIQGCLCDSSWPVGLGAGESQLSQYFGPDCSRMHCPSGDDPMTAVDETDCEGV--VADGGGGTGAPDNLCHVDCANRGICNYNSGECSCFSGFYGSNCASLSPL 274
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP) HSP 1 Score: 315 bits (806), Expect = 3.050e-105 Identity = 134/244 (54.92%), Postives = 169/244 (69.26%), Query Frame = 1
Query: 19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
C+ + CN HG C+ TC C EG+GA TD+T YR+ DCS R CP+G +WG IPT + T+H ECS G+CDR +G C C+ G+ G AC+RS CPN CSGHG+C++M+ LAT + A PLS TTY G+ + TWD++ I GC+CDS W VGLG G++Q +WFGPDCS HCPSGDDP T +DETDC V + G +GNLCHVDCANRG CDY +G+C C+ G+YG NC S LA
Sbjct: 35 CAALSNCNAHGRCDALTKTCECNEGYGASTDITNYRSPDCSLRTCPAGPSWGGIPTSATTSHAKAECSDAGVCDRSTGTCMCYYGYEGSACQRSTCPNGCSGHGQCLSMRELATETSAFPLSPATTYGGDVTATTWDQDRIQGCLCDSYWPVGLGAGESQLSQWFGPDCSRMHCPSGDDPMTAEDETDCEGVVAAGGV--GPGAAGNLCHVDCANRGICDYSSGVCSCFPGFYGSNCASLSPLA 276
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA) HSP 1 Score: 313 bits (802), Expect = 1.040e-104 Identity = 138/246 (56.10%), Postives = 169/246 (68.70%), Query Frame = 1
Query: 19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCS--ARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVLA 750
C+ N CN HG C+ TCTCYEG+GA TDVT YR+ DCS R CP+G +WG IPT + T+H ECSG GICDR SG C C+ G+ G AC+RS CPN CSGHG+C++M+ +A S A PLS T Y G+ + TWD++ I GC+CDSSW VGLG G++Q ++FGPDCS HCPSGDDP T DETDC + ++ G G + NLCHVDCANRG CDY G C C+ G+YG NC S LA
Sbjct: 28 CASLNNCNAHGRCDALTKTCTCYEGFGAPTDVTNYRSPDCSLRTRTCPAGPSWGGIPTSATTSHPKAECSGAGICDRSSGTCICYYGYEGSACQRSSCPNSCSGHGQCLSMREMAMESSAFPLSPPTKYEGDVTATTWDQDRIQGCLCDSSWPVGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGI--IAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYGSNCASLSPLA 271
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A833WEK2_PHYIN (EGF-like domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WEK2_PHYIN) HSP 1 Score: 312 bits (800), Expect = 2.410e-104 Identity = 135/245 (55.10%), Postives = 170/245 (69.39%), Query Frame = 1
Query: 19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSG--NLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
C+ N CN HG C+ TCTCYEG+GA TD+T YR+ DCS R CP+G +WG IP + T+H +ECSG G+CDR++G C C+ G+ G AC+RS CPN CSGHG+C++M+ LA A PLS T Y G+ + TWD++ I GC+CDS+W VGLG G++Q ++FGPDCS HCPSGDDP T DET C + V TG G G NLCHVDCANRG CDY+TG C C++G+YG NC S L
Sbjct: 34 CAALNNCNAHGRCDALTKTCTCYEGFGAPTDITNYRSPDCSMRTCPAGPSWGGIPNSATTSHPKEECSGAGVCDRNTGTCFCYYGYEGSACQRSSCPNSCSGHGQCMSMRELAVEPSAFPLSPPTKYEGDVRATTWDQDRIQGCLCDSTWPVGLGAGESQLSQYFGPDCSKMHCPSGDDPMTAVDETKCVGI----VATGGAGTGGPDNLCHVDCANRGICDYNTGECSCFSGFYGSNCASLSPL 274
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Match: A0A5D6XZL0_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZL0_9STRA) HSP 1 Score: 310 bits (793), Expect = 1.980e-103 Identity = 135/243 (55.56%), Postives = 168/243 (69.14%), Query Frame = 1
Query: 19 CSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVCPSGKAWGDIPTGSLTAHQVQECSGRGICDRDSGECACFDGFSGGACERSGCPNECSGHGRCVNMKALATASDALPLSNITTYTGEDDSVTWDEEMIYGCVCDSSWEVGLGFGQTQEPEWFGPDCSLRHCPSGDDPSTVDDETDCYNVTSLSVYTGARGLSGNLCHVDCANRGTCDYDTGLCECYTGYYGYNCQQQSVL 747
CS + CNGHG C TA TC C+EG+GA +D+T Y++ DCS RVCPSG +W IPT + +AH ECS G CDR SG+C CF G+ G AC+R CPN CSGHG+CV+M+A+A ++A PLS TTY G + + TWD+ I+GCVCDSSW+VGL GQ Q +WFG DCSL CPSGDDP T DETDC L+ G +GN CH+DC+NRG CDY TG C C++G+YG NC S +
Sbjct: 24 CSALSNCNGHGRCVTASKTCICFEGYGATSDITSYKSPDCSKRVCPSGPSWAGIPTAANSAHPRTECSDAGYCDRSSGQCRCFAGYDGAACQRYACPNGCSGHGQCVSMQAMAELTNAAPLSAATTYAGAEATTTWDQNRIFGCVCDSSWDVGLAAGQRQSSQWFGADCSLMRCPSGDDPMTTVDETDCGG--KLAPGGVGTGETGNKCHIDCSNRGKCDYTTGTCACFSGFYGSNCASLSPV 264 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig429.10964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig429.10964.1 >prot_H-paniculata_contig429.10964.1 ID=prot_H-paniculata_contig429.10964.1|Name=mRNA_H-paniculata_contig429.10964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp VCGDSGCSLFNWCNGHGTCNTAISTCTCYEGWGADTDVTLYRAADCSARVback to top mRNA from alignment at H-paniculata_contig429:7172..10237+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig429.10964.1 ID=mRNA_H-paniculata_contig429.10964.1|Name=mRNA_H-paniculata_contig429.10964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3066bp|location=Sequence derived from alignment at H-paniculata_contig429:7172..10237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig429:7172..10237+ >mRNA_H-paniculata_contig429.10964.1 ID=mRNA_H-paniculata_contig429.10964.1|Name=mRNA_H-paniculata_contig429.10964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig429:7172..10237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |