mRNA_H-paniculata_contig42722.10934.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A6H5KPJ7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ7_9PHAE) HSP 1 Score: 117 bits (294), Expect = 3.140e-30 Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 1
Query: 16 ASVAEVFDYWAHASAIDIGENMTAPDNFESRAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 204
ASVAEVFDYWAHASAIDIGE+M+APDNFES+AQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ
Sbjct: 27 ASVAEVFDYWAHASAIDIGEDMSAPDNFESQAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 89
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: D8LH95_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH95_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.490e-29 Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 1
Query: 16 ASVAEVFDYWAHASAIDIGENMTAPDNFESRAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 204
ASVAEVFDYWAHASAIDIGE+M+APDNFES+AQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ
Sbjct: 155 ASVAEVFDYWAHASAIDIGEDMSAPDNFESQAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 217
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A835Z3Z5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z5_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.200e-13 Identity = 41/65 (63.08%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 LFSCLA-SVAEVFDYWAHASAIDIGENMTAPDNFESRAQAVVTFVAGAIAGVVSRTATAPFDRLK 192
L C A S+ +VFDYWAHASAIDIGE + APDNF+ A A AGVVSRTATAP DRLK
Sbjct: 423 LLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQ----------ACAFAGVVSRTATAPMDRLK 477
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: G4VEN7_SCHMA (Mitochondrial carrier protein-related n=11 Tax=Schistosoma TaxID=6181 RepID=G4VEN7_SCHMA) HSP 1 Score: 72.0 bits (175), Expect = 4.250e-13 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNF----ESRAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 204
LFS + + E+F YW HASAIDIGENM PD+F + A T V+G IAG +SRT TAP DR+K Q
Sbjct: 142 LFSGTSKIDEIFRYWRHASAIDIGENMCVPDDFTEEEKKSGDAWKTLVSGGIAGCISRTVTAPLDRIKLTWQ 213
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A504YTN4_FASGI (Calcium-binding mitochondrial carrier protein SCaMC-1 n=3 Tax=Fasciolidae TaxID=27843 RepID=A0A504YTN4_FASGI) HSP 1 Score: 71.2 bits (173), Expect = 7.940e-13 Identity = 39/72 (54.17%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNF----ESRAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 204
LFS + + E+F YW ASAIDIGE+M PD+F + QA T VAG IAG VSRT TAP DR+K Q
Sbjct: 144 LFSGTSRIDEIFQYWKRASAIDIGEDMLVPDDFTEEEKKTGQAWKTLVAGGIAGCVSRTVTAPLDRIKLFWQ 215
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: H2KQQ3_CLOSI (Calcium-binding mitochondrial carrier protein SCaMC-1 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=H2KQQ3_CLOSI) HSP 1 Score: 70.1 bits (170), Expect = 2.030e-12 Identity = 39/72 (54.17%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNF----ESRAQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 204
LFS + + E+F YW ASAIDIGE+M PD+F + A T VAG IAG VSRTATAP DR+K Q
Sbjct: 144 LFSGTSKIDEIFRYWKRASAIDIGEDMLVPDDFTEEEKKSGDAWKTLVAGGIAGCVSRTATAPLDRIKLTWQ 215
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A6J2W119_CHACN (calcium-binding mitochondrial carrier protein SCaMC-3-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W119_CHACN) HSP 1 Score: 69.7 bits (169), Expect = 2.780e-12 Identity = 40/73 (54.79%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNFESRAQ--AVV--TFVAGAIAGVVSRTATAPFDRLKTLLQV 207
LF+ L S+ +V YW HA +DIGE++T PD F R + VV VAGA+AG VSRT TAP DRLK LQV
Sbjct: 157 LFNPLHSMEDVAHYWKHALMLDIGEHLTVPDEFSERERRSGVVWRQLVAGAMAGAVSRTGTAPLDRLKVFLQV 229
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A1S3WEE9_ERIEU (calcium-binding mitochondrial carrier protein SCaMC-3 n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3WEE9_ERIEU) HSP 1 Score: 68.9 bits (167), Expect = 4.140e-12 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNFESRAQAVVTF----VAGAIAGVVSRTATAPFDRLKTLLQV 207
L L +V +V +W H++ +DIGE +T PD F R + T+ VAGA+AG VSRT TAP DRLK L+QV
Sbjct: 13 LLHSLENVEDVLYFWKHSTVLDIGECLTVPDEFSEREKMTGTWWKQLVAGAVAGAVSRTGTAPLDRLKVLMQV 85
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A5J4N9L1_9TREM (Uncharacterized protein n=2 Tax=Paragonimus TaxID=34503 RepID=A0A5J4N9L1_9TREM) HSP 1 Score: 68.9 bits (167), Expect = 5.070e-12 Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNF--ESR--AQAVVTFVAGAIAGVVSRTATAPFDRLKTLLQ 204
LFS + + E+F YW AS IDIGE+M PD+F E R +A T VAG IAG VSRTATAP DR+K Q
Sbjct: 142 LFSGTSRIDEIFHYWRRASVIDIGEDMLVPDDFTEEERKSGEAWKTLVAGGIAGCVSRTATAPLDRIKLTWQ 213
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Match: A0A183VP30_TRIRE (Uncharacterized protein n=1 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A183VP30_TRIRE) HSP 1 Score: 68.6 bits (166), Expect = 7.100e-12 Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 LFSCLASVAEVFDYWAHASAIDIGENMTAPDNF----ESRAQAVVTFVAGAIAGVVSRTATAPFDRLK 192
LFS + + E+F YW H +AIDIGENM PD+F + A T V+G IAG +SRT TAP DR+K
Sbjct: 120 LFSGTSKIDEIFRYWRHTTAIDIGENMCVPDDFTEEEKKSGDAWKTLVSGGIAGCISRTVTAPLDRIK 187 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42722.10934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42722.10934.1 >prot_H-paniculata_contig42722.10934.1 ID=prot_H-paniculata_contig42722.10934.1|Name=mRNA_H-paniculata_contig42722.10934.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp LFSCLASVAEVFDYWAHASAIDIGENMTAPDNFESRAQAVVTFVAGAIAGback to top mRNA from alignment at H-paniculata_contig42722:838..1573+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42722.10934.1 ID=mRNA_H-paniculata_contig42722.10934.1|Name=mRNA_H-paniculata_contig42722.10934.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=736bp|location=Sequence derived from alignment at H-paniculata_contig42722:838..1573+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42722:838..1573+ >mRNA_H-paniculata_contig42722.10934.1 ID=mRNA_H-paniculata_contig42722.10934.1|Name=mRNA_H-paniculata_contig42722.10934.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at H-paniculata_contig42722:838..1573+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |