mRNA_H-paniculata_contig42705.10923.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig42705.10923.1
Unique NamemRNA_H-paniculata_contig42705.10923.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 2.000e-61
Identity = 110/224 (49.11%), Postives = 139/224 (62.05%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRG-GCPYLLMLLDDSTVF-------------------------GAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRAR 594
            +Q RL++CAHM+EA HRGV AT++ L  YC W  M+ +V EFV+QCLHC+DS+SG  V RP GE +HG   GEVLHFD LH+G S PL    +    G  YLL+++DD + F                         G P V+VSDT  +FKN ++  L  ALG + RF+VANS WSNGT +RM RE++ T KAVL E  R V +W   VP VQWALNTA+R R
Sbjct:  414 MQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRER 637          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 3.400e-60
Identity = 108/226 (47.79%), Postives = 141/226 (62.39%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRG-GCPYLLMLLDDST-------------------------VFGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARLG 600
            LQ RL+VCAHM+EA HRG  AT+  L+ YC W  ME +V +FV+QCLHC+DS++G +V RPLGE +HGT  GEV+HFD L++GAS PL +  +    G  Y+L+++DD +                         + G P V+VSDT  +FKN +++ L TALG    FSVANS WSNGT +RM REV+ T KA++ E      +W   VP VQWALNTA R R G
Sbjct: 1292 LQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYG 1517          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 4.620e-60
Identity = 110/224 (49.11%), Postives = 139/224 (62.05%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRG-GCPYLLMLLDDSTVF-------------------------GAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRAR 594
            +Q RL++CAHM+EA HRGV AT++ L  YC W  M+ +V EFV+QCLHC+DS+SG  V RP GE +HG   GEVLHFD LH+G S PL    +    G  YLL+++DD + F                         G P V+VSDT  +FKN ++  L  ALG + RF+VANS WSNGT +RM RE++ T KAVL E  R V +W   VP VQWALNTA+R R
Sbjct: 1190 MQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRER 1413          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 5.550e-47
Identity = 91/190 (47.89%), Postives = 114/190 (60.00%), Query Frame = 1
Query:  103 MEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRG-GCPYLLMLLDDSTVF-------------------------GAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRAR 594
            M+ +V EFV+QCLHC+DS+SG  V RP GE +HG   GEVLHFD LH+G S PL    +    G  YLL+++DD + F                         G P V+VSDT  +FKN ++  L  ALG + RF+VANS WSNGT +RM REV+ T KAVL E  R + +W   VP VQWALNTA+R R
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRER 190          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6A3LWA5_9STRA (Integrase catalytic domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LWA5_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.230e-32
Identity = 81/224 (36.16%), Postives = 114/224 (50.89%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRGGCPYLLMLLDDSTV-------------------------FGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARL 597
            LQ RL V AH   A HRG   T   L     W  +  +VA FV +C+HC+ + +G ++ RPLGE L  T+  E LHFD L +             GG  Y+L+L D+ +                          FG  R +VSD   +F+NR+++ L  ALGA H F+ A ++W+NGTV+ +NREV+   KA+L++    V +W   +PVVQ ALN     RL
Sbjct:  274 LQLRLGVVAHAGAAGHRGAKTTAKALEDLFSWRSLRKDVAVFVSECMHCMTTATG-KIPRPLGETLRATKPNEQLHFDFLSMAEG---------AGGLKYVLLLKDNMSGYVELVACVQATSDEVYQSLLDWFKRFGVVRQWVSDQGAHFRNRVIAELQRALGAHHHFTTAYTLWANGTVEVVNREVLKAVKALLSKRRLRVEDWPRVLPVVQGALNQMPADRL 487          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: R7Q542_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q542_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 5.360e-31
Identity = 76/225 (33.78%), Postives = 109/225 (48.44%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRGGCPYLLMLLDDST-------------------------VFGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARLG 600
            LQ  ++VC+H     HRG+DAT + +     W  ++ +V   VR C HC+ +R+G  V RPLG  +HG    EV+H D L++G     K+         YLL+L DD +                         VFG     VSD   +FKN L+  L   L  KH F+ A S W+NG+++RM REV+ + +A+L+E      +W      VQ  +N A   RLG
Sbjct:  285 LQLSIMVCSHCGSIGHRGMDATGSVIRENFWWSSLDQDVKALVRGCYHCIVTRTGEVVPRPLGHAIHGDRPNEVVHMDFLYMGQGLSNKK---------YLLILRDDLSSYIWLWPTEDTTAASAAEALCVWIGVFGCMEWMVSDQGSHFKNSLIKSLTDELRTKHHFTTAYSPWANGSIERMCREVLRSCRALLSEWRLGAKDWPAVTEAVQSVINHAPLRRLG 500          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A485LNJ2_9STRA (Aste57867_23616 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNJ2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.660e-25
Identity = 67/212 (31.60%), Postives = 100/212 (47.17%), Query Frame = 1
Query:   10 RLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGAS-DPLKEHEVIRGGCPY---------------LLMLLDDSTVFGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARL 597
            R++V AH     HRG D   +HL      D ++  V  FVR+C  C   +    + RP  EL H     E LHFD L +G S  P+K   V++    +               +  LLD    FG P  ++SD   +FKN ++  +   L   H+F++  S W NGT++R+NR+++   + +L E +    EW   +PVVQ  LN    A L
Sbjct:  975 RMLVIAHCGSMGHRGEDVMYSHLRRQFWIDNLKQLVQHFVRECPMCPLVKGERVIQRPHSELWHAERANEGLHFDFLFMGDSFGPMKYILVLKDDLTHFCELIACEAPTADVVVTALLDWHKRFGIPETWISDQGSHFKNHVMKTVAAKLKVDHKFTITYSPWRNGTIERLNRDILQVMRVLLKEYHLDEREWEYLLPVVQANLNQTPTASL 1186          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6A3VH71_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VH71_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.910e-25
Identity = 74/225 (32.89%), Postives = 107/225 (47.56%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRGGCPYLLMLLD--------------DSTV-----------FGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARLG 600
            L  RL + AH     HRG  AT  HL      + ++  VA FVRQC  CL S+ G+ + RP GE L  +E   VLHFD L +G S          G   Y+L+L D              DS+V           FG P  ++SD    FKN +V+ L   L ++  F+ A   W NG+V+R+NR+++   + ++ E     ++W   +P+VQ +LN      LG
Sbjct:  120 LLQRLFIIAHCGAQGHRGGAATAEHLRRLFAIEHLDTKVAAFVRQCRLCLHSKGGNIIPRPWGETLECSERNGVLHFDYLSMGESF---------GDSKYILVLKDHASHYCELVVADTADSSVTVEALLAWHARFGVPPTWISDQGSNFKNEVVAELSRRLRSQQEFTPAYCPWINGSVERVNRDILQVIRTMILEYKINHTDWPYLMPMVQASLNHTAVPSLG 335          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: H3H4D4_PHYRM (RNA-directed DNA polymerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4D4_PHYRM)

HSP 1 Score: 110 bits (275), Expect = 1.680e-24
Identity = 75/222 (33.78%), Postives = 105/222 (47.30%), Query Frame = 1
Query:   10 RLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRGGCPYLLMLLD--------------DSTV-----------FGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARLG 600
            RL + AH     HRG  A V HL      + +    + FVRQC  CL S+ G+ + RP GE +   E   VLHFD L +G S          G   Y+L+L D              DSTV           FG P V++SD   +FKN +VS L   L  + +F+ A   W NG+V+R+NR+++   + ++ E     S+W   VP+VQ +LN      LG
Sbjct:  950 RLFIIAHCGAQGHRGHAAMVEHLRRLFAIEKLNTLASTFVRQCRLCLHSKGGNIIPRPWGETIDCCERNGVLHFDFLFMGESF---------GDSKYILVLKDHASHFCELVVADTADSTVTVEAFLAWHSRFGLPPVWISDQGSHFKNEVVSELSRRLRTQQQFTPAYCPWINGSVERVNRDILQVIRTMILEYKINHSDWVYLVPMVQSSLNHTAVPSLG 1162          
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Match: A0A6A3GZ49_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GZ49_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.830e-24
Identity = 67/208 (32.21%), Postives = 105/208 (50.48%), Query Frame = 1
Query:    1 LQARLIVCAHMQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLRPLGELLHGTEVGEVLHFDVLHLGASDPLKEHE-VIRGGCPYLLMLL--DDSTV-------------FGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNREVINTFKAVLNETNRPVSEWSVAVPVVQWALN 576
            L  RL++ AH     HRG+    NH+       G++  V +F  +CL CL  + G  + RP  E  H  E  E LH+D L LG S     +  V++    + + L+  D ST              FG P V+VSDT  +FK+++++ L   L  +  F +A S W NG+V+R+NR+++   KA+  E    V +W   +P+VQ ++N
Sbjct:  184 LTQRLLIIAHCGRNGHRGMHVMQNHIRRLFYVGGLDRIVKDFCAKCLLCLHVKGGVVIPRPFSETHHTFERNETLHWDFLTLGESFGTSRYALVLKDEATHFVDLVACDSSTSEVAASAILDWYSRFGVPTVWVSDTGSHFKSKVIAELSRRLKGRQEFILAYSPWKNGSVERVNRDILQVLKALALEFKVSVHDWPYLLPLVQSSVN 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42705.10923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCX8_9PHAE2.000e-6149.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K5A5_9PHAE3.400e-6047.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE4.620e-6049.11Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS6_9PHAE5.550e-4747.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3LWA5_9STRA1.230e-3236.16Integrase catalytic domain-containing protein n=7 ... [more]
R7Q542_CHOCR5.360e-3133.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A485LNJ2_9STRA2.660e-2531.60Aste57867_23616 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A3VH71_9STRA4.910e-2532.89Integrase catalytic domain-containing protein n=1 ... [more]
H3H4D4_PHYRM1.680e-2433.78RNA-directed DNA polymerase n=1 Tax=Phytophthora r... [more]
A0A6A3GZ49_9STRA1.830e-2432.21Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42705contigH-paniculata_contig42705:628..1302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.3
Seed ortholog evalue1.5e-26
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size600
Cds size570
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42705.10923.1prot_H-paniculata_contig42705.10923.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig42705 658..1302 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930298.5893962-UTR-H-paniculata_contig42705:627..6571622930298.5893962-UTR-H-paniculata_contig42705:627..657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig42705 628..657 +
1691481231.0387816-UTR-H-paniculata_contig42705:627..6571691481231.0387816-UTR-H-paniculata_contig42705:627..657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig42705 628..657 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930298.612-CDS-H-paniculata_contig42705:657..9481622930298.612-CDS-H-paniculata_contig42705:657..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42705 658..948 +
1691481231.0503378-CDS-H-paniculata_contig42705:657..9481691481231.0503378-CDS-H-paniculata_contig42705:657..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42705 658..948 +
1622930298.6262448-CDS-H-paniculata_contig42705:1023..13021622930298.6262448-CDS-H-paniculata_contig42705:1023..1302Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42705 1024..1302 +
1691481231.0637538-CDS-H-paniculata_contig42705:1023..13021691481231.0637538-CDS-H-paniculata_contig42705:1023..1302Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig42705 1024..1302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig42705.10923.1

>prot_H-paniculata_contig42705.10923.1 ID=prot_H-paniculata_contig42705.10923.1|Name=mRNA_H-paniculata_contig42705.10923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MQEASHRGVDATVNHLAAYCVWDGMEANVAEFVRQCLHCLDSRSGSRVLR
PLGELLHGTEVGEVLHFDVLHLGASDPLKEHEVIRGGCPYLLMLLDDSTV
FGAPRVFVSDTVRYFKNRLVSLLVTALGAKHRFSVANSVWSNGTVDRMNR
EVINTFKAVLNETNRPVSEWSVAVPVVQWALNTAHRARLG
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mRNA from alignment at H-paniculata_contig42705:628..1302+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig42705.10923.1 ID=mRNA_H-paniculata_contig42705.10923.1|Name=mRNA_H-paniculata_contig42705.10923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=675bp|location=Sequence derived from alignment at H-paniculata_contig42705:628..1302+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCAGGCGCGGCTCATAGTATGCGCCCACATGCAGGAGGCGAGCCACCG GGGCGTGGACGCTACGGTCAACCACCTTGCGGCATATTGCGTGTGGGACG GGATGGAGGCGAACGTGGCGGAGTTTGTCCGGCAGTGTTTGCACTGTTTG GATTCCAGGTCAGGGTCGCGGGTGCTCCGCCCGTTAGGCGAGCTGTTACA CGGCACGGAGGTGGGGGAGGTACTTCACTTCGACGTCCTGCATCTGGGCG CGAGCGACCCCCTCAAGGAGCACGAGGTGATCCGCGGGGGCTGCCCGTAC CTTCTCATGTTACTGGATGACGTCAGCGGTTAGGTGTGGCTAGAGCCGGC GCTGGAATGCACGGCGAAAGTGGCTGCCGCCACCGTGTTGAAGTAGTCCA CGGTGTTTGGAGCTCCTAGGGTGTTCGTCAGTGACACCGTTCGTTACTTC AAGAACCGACTGGTCAGCCTGTTGGTGACCGCGCTGGGAGCGAAGCATCG CTTTTCCGTTGCCAACTCAGTGTGGTCAAACGGCACCGTGGACCGCATGA ATCGGGAGGTTATCAACACCTTCAAGGCGGTGCTGAACGAGACGAACCGC CCGGTGAGCGAATGGTCGGTAGCTGTGCCGGTGGTCCAGTGGGCCCTCAA CACTGCGCATCGGGCCAGGTTGGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig42705:628..1302+

>mRNA_H-paniculata_contig42705.10923.1 ID=mRNA_H-paniculata_contig42705.10923.1|Name=mRNA_H-paniculata_contig42705.10923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig42705:628..1302+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGGAGGCGAGCCACCGGGGCGTGGACGCTACGGTCAACCACCTTGC
GGCATATTGCGTGTGGGACGGGATGGAGGCGAACGTGGCGGAGTTTGTCC
GGCAGTGTTTGCACTGTTTGGATTCCAGGTCAGGGTCGCGGGTGCTCCGC
CCGTTAGGCGAGCTGTTACACGGCACGGAGGTGGGGGAGGTACTTCACTT
CGACGTCCTGCATCTGGGCGCGAGCGACCCCCTCAAGGAGCACGAGGTGA
TCCGCGGGGGCTGCCCGTACCTTCTCATGTTACTGGATGACATGCAGGAG
GCGAGCCACCGGGGCGTGGACGCTACGGTCAACCACCTTGCGGCATATTG
CGTGTGGGACGGGATGGAGGCGAACGTGGCGGAGTTTGTCCGGCAGTGTT
TGCACTGTTTGGATTCCAGGTCAGGGTCGCGGGTGCTCCGCCCGTTAGGC
GAGCTGTTACACGGCACGGAGGTGGGGGAGGTACTTCACTTCGACGTCCT
GCATCTGGGCGCGAGCGACCCCCTCAAGGAGCACGAGGTGATCCGCGGGG
GCTGCCCGTACCTTCTCATGTTACTGGATGACTCCACGGTGTTTGGAGCT
CCTAGGGTGTTCGTCAGTGACACCGTTCGTTACTTCAAGAACCGACTGGT
CAGCCTGTTGGTGACCGCGCTGGGAGCGAAGCATCGCTTTTCCGTTGCCA
ACTCAGTGTGGTCAAACGGCACCGTGGACCGCATGAATCGGGAGGTTATC
AACACCTTCAAGGCGGTGCTGAACGAGACGAACCGCCCGGTGAGCGAATG
GTCGGTAGCTGTGCCGGTGGTCCAGTGGGCCCTCAACACTGCGCATCGGG
CCAGGTTGGGTTCCACGGTGTTTGGAGCTCCTAGGGTGTTCGTCAGTGAC
ACCGTTCGTTACTTCAAGAACCGACTGGTCAGCCTGTTGGTGACCGCGCT
GGGAGCGAAGCATCGCTTTTCCGTTGCCAACTCAGTGTGGTCAAACGGCA
CCGTGGACCGCATGAATCGGGAGGTTATCAACACCTTCAAGGCGGTGCTG
AACGAGACGAACCGCCCGGTGAGCGAATGGTCGGTAGCTGTGCCGGTGGT
CCAGTGGGCCCTCAACACTGCGCATCGGGCCAGGTTGGGT
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