prot_H-paniculata_contig42692.10916.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42692.10916.1
Unique Nameprot_H-paniculata_contig42692.10916.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.400e-44
Identity = 83/149 (55.70%), Postives = 105/149 (70.47%), Query Frame = 0
Query:    2 RRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDAD 149
            +RFKM+D+G+ SLVLGME+ RDRE  TLTISQE Y ++++  +GM G    S PG G + S  QPE  LLDE   +K+QGI  S MY+AQ LRY IMYA  QL+R M+  SK HM AA+H LRYL+ T DF+I  K+G FKL  FSD++
Sbjct:  141 KRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSN 289          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 4.620e-42
Identity = 82/149 (55.03%), Postives = 105/149 (70.47%), Query Frame = 0
Query:    2 RRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDAD 149
            +RFKM+D+G+ SLVLGME+ RDRE  TLTISQE Y ++++  +G+ G    S PG G + S  QPE  LLDE   +K+QGI  S MY+AQ LRY IMYA  QL+R M+  SK HM AA+H LRYL+ T DF+I  K+G FKL  FSD++
Sbjct: 1370 KRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSN 1518          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.100e-41
Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 0
Query:    2 RRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDAD 149
            +RFKM+D+G+ S  LGM++ RDRE  TLTISQE Y ++++  +GM G    S PG G + S  QPE  LLDE   +K+QGI  S MY+AQ LRY IMYA  QL+R+M+  SK HM AA+H LRYL+ T DF+I  K+G FKL  FSD++
Sbjct:  362 KRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSN 510          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.530e-41
Identity = 82/149 (55.03%), Postives = 104/149 (69.80%), Query Frame = 0
Query:    2 RRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDAD 149
            +RFKM+D+G+ SLVL ME+ RDRE  TLTISQE Y ++++  +GM G    S PG G + S  QPE  LLDE   +K+QGI  S MY+AQ LRY IMYA  QL+R M+  SK HM AA+H LRYL+ T DF+I  K+G FKL  FSD++
Sbjct:  701 KRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSN 849          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.850e-39
Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 0
Query:    4 FKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDAD 149
            FKM+DMG+V LVLGME+ RD   GTLTISQ+ YT++++  +GM  C   S PG G + S  QPE  LL E+  +++QGI    MY+AQ LRY IMYA  QL+R M   SK HM AA+H LRY++ T +F I  K   FKL  FSD++
Sbjct:  234 FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYATGQLARPMEKPSKIHMVAAKHTLRYVAGTTNFRITYKSEGFKLATFSDSN 380          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 5.650e-37
Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 MRRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDA 148
            M  F+M+DMG+V  V+G+E+ RD E GTL ISQ  Y + ++  YGME  N +S PG G + S  QP+ QLL  + +++FQ IT S +YLAQ  RY + YA +QL+R  +  ++ HMAAA+H LRYL  T D  IV K+G F+L+ F+D+
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDS 149          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.230e-35
Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 0
Query:    2 RRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTI 133
            +RFKM+DMG+V LVLGME+ RDR  GTLTISQE Y+++++  +GM  C   S PG G + S  QPE  LL E+  +++QGI    +Y+AQ LRY IMYA  QL+R M+  SK HM AA+H LRY++ T DF I
Sbjct:  678 QRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYSKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLSEEETRRYQGIVGCLIYIAQVLRYDIMYATGQLTRPMAKPSKIHMVAAKHTLRYVAGTTDFRI 810          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 3.310e-35
Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 0
Query:    3 RFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDA 148
            RF+M+DMG+V  +LG+++ RD E GTL ISQE+Y   ++  +GM+  N +S PG G + S NQP+ Q+L    +K +Q +T S +YLAQ  R+ + YAA QLS+  S  ++ +M AA+H LRYL       IV KRG F+L AF+D+
Sbjct:   80 RFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDS 226          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 4.590e-35
Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 MRRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDA 148
            M  F+M+DMG+V  V+G+E+ RD E GTL ISQ  Y + ++  YGME  N +S PG G + S  QP+ QLL  + +++FQ IT S +YLAQ  RY + YA +QL+R  +  ++ HMAAA+H LRYL  T D  IV K+G F+L+ F+D+
Sbjct: 1217 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDS 1365          
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 5.010e-35
Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 MRRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVA-YGMEGCNLLSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAANQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDA 148
            M  F+M+DMG+V  V+G+E+ RD E GTL ISQ  Y + ++  YGME  N +S PG G + S  QP+ QLL  + +++FQ IT S +YLAQ  RY + YA +QL+R  +  ++ HMAAA+H LRYL  T D  IV K+G F+L+ F+D+
Sbjct:  438 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDS 586          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42692.10916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE2.400e-4455.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE4.620e-4255.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME8_9PHAE1.100e-4153.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE1.530e-4155.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KPN4_9PHAE1.850e-3951.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE5.650e-3747.65Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL37_9PHAE1.230e-3553.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAK0_9PHAE3.310e-3545.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE4.590e-3547.65Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JF46_9PHAE5.010e-3547.65Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42692contigH-paniculata_contig42692:749..1198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42692.10916.1mRNA_H-paniculata_contig42692.10916.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42692 359..1571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42692.10916.1 ID=prot_H-paniculata_contig42692.10916.1|Name=mRNA_H-paniculata_contig42692.10916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
MRRFKMSDMGDVSLVLGMEMSRDREPGTLTISQENYTQAMVAYGMEGCNL
LSKPGVGPQFSINQPEKQLLDEDGQKKFQGITRSAMYLAQTLRYGIMYAA
NQLSRTMSTASKAHMAAAEHFLRYLSDTADFTIVNKRGSFKLTAFSDAD*
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