prot_H-paniculata_contig4267.10910.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4267.10910.1
Unique Nameprot_H-paniculata_contig4267.10910.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length365
Homology
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BLAST of mRNA_H-paniculata_contig4267.10910.1 vs. uniprot
Match: D7G502_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G502_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.360e-60
Identity = 157/367 (42.78%), Postives = 186/367 (50.68%), Query Frame = 0 
Query:    2 QRTCLFCTYCYVLLGRHTHGFFTPLGGVRQVRARARTRVSLTVAAPRCSVRKCSRRNLLRLAGTPAGNGGNGGAAAAEDGSLGANIGLED-AGIRRAPLRITPNIQPHDKRRPKTDVIRDLATNPAFLTDESFDMFALAWAEFTDWSRRTVNRNVAGVPFEFDIRQWCSSARKWWLRMVEMDVQAKADFFRLYEQGMHDRDAWGNQAVKVDARVEDEWDNIYVECQDC---------FDGG-RGGTXXXXXXXXXXXXXXXXXXXXXSKENAAREGAGAALPAYMSSSTGAAMSSARDRDSTLRFSSTLDLGFEAIFAGEDEEEEEGTLGEGXXXXXXXXXEERDDGDEEIIDCAIRGKWYFKDNDD 357
             RTCL       L G    GF T L        R  TR  +T    RC V + +    L     P    G G AAA  D + GAN  L+  +GI RAPLRITPN QP +KRRPK +V +D+ T  AFLT+ESFD+ A+AW EF+D+ RRTV RN+ G  F+FD RQW SS RKWW R VEMDVQAKAD FRLY+  +  RDA GNQA+KVDARVEDEWD+IYV+CQD          FD    GG                         +  +EG G           GA+  SA    S     + +D   E         E  GT  EG               DEEIIDCAIRG+W F +NDD
Sbjct:    1 MRTCLLSAALLFLGG--AQGFITSL-------PRLPTR-DITPTPGRCRVPRLA----LTPPRKPNTGAGAGSAAAGGDDNGGANDVLKSTSGITRAPLRITPNFQPQEKRRPKFNVDKDV-TYGAFLTEESFDIAAMAWEEFSDFLRRTVERNLNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFRLYDSSVGQRDARGNQALKVDARVEDEWDSIYVDCQDVADVDFQDWSFDSSISGGVEGAATGSDVTGWRSSESSSEALPSSLRKEGGG----------WGASPGSASTGGSRSALMAAMDAFQEEXXXXXXXXE--GTGSEGFD-------------DEEIIDCAIRGRWTFTNNDD 327
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BLAST of mRNA_H-paniculata_contig4267.10910.1 vs. uniprot
Match: A0A836CM36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM36_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.150e-21
Identity = 57/141 (40.43%), Postives = 77/141 (54.61%), Query Frame = 0 
Query:   98 PLRITPNIQPHDKRRPKTDVIRDLAT--NPAFLTDESFDMFALAWAEFTDWSRRTVNRNVAGVPFEFDIRQWCSSARKWWLRMVEMDVQAKADFFRLYEQGMHDRDAWGNQAVKVDARVEDEWDNIYVECQDCFDGGRGGT 236
            PLRI  N  P     P+T + RD ++  N A +      + +LA+AEF DW++RT+ RN+ G  FEFD RQW ++  KWW R +E D  AK +F   Y + +  R   G  A    A  E+EW NIY +C  C  GG GG 
Sbjct:    6 PLRIQANFAPI---APRTLLSRDSSSYQNAAQVERSLEPIASLAYAEFRDWTQRTMARNLEGHAFEFDRRQWQTAIAKWWQRALEADEAAKLEFAAQYNRIVAGR---GGDAFDTGAAAEEEWGNIYFDCSSCLGGGAGGV 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4267.10910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G502_ECTSI1.360e-6042.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CM36_9STRA2.150e-2140.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..364
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4267contigH-paniculata_contig4267:6086..11541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4267.10910.1mRNA_H-paniculata_contig4267.10910.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4267 5888..11752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4267.10910.1 ID=prot_H-paniculata_contig4267.10910.1|Name=mRNA_H-paniculata_contig4267.10910.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=365bp
MQRTCLFCTYCYVLLGRHTHGFFTPLGGVRQVRARARTRVSLTVAAPRCS
VRKCSRRNLLRLAGTPAGNGGNGGAAAAEDGSLGANIGLEDAGIRRAPLR
ITPNIQPHDKRRPKTDVIRDLATNPAFLTDESFDMFALAWAEFTDWSRRT
VNRNVAGVPFEFDIRQWCSSARKWWLRMVEMDVQAKADFFRLYEQGMHDR
DAWGNQAVKVDARVEDEWDNIYVECQDCFDGGRGGTNNNLQQQEQQEQQQ
KQQQPPRSKENAAREGAGAALPAYMSSSTGAAMSSARDRDSTLRFSSTLD
LGFEAIFAGEDEEEEEGTLGEGDDADSDGQGEERDDGDEEIIDCAIRGKW
YFKDNDDQPHFSPQ*
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