mRNA_H-paniculata_contig4261.10893.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI) HSP 1 Score: 384 bits (985), Expect = 6.480e-131 Identity = 173/227 (76.21%), Postives = 193/227 (85.02%), Query Frame = 1
Query: 25 SDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
+D H+ L+ QV+VWGGAAK PRIFCG+YT+ ANH TK+KAIKETWA+RCDGFVAFSD+VDL VPSFKIKHEGPE W NMWQKSRAIWKYID HY +FDWFVLGGDDIFLIVENLRKYLLS+DIK AAGG +GG+ PMYLGRRFRP+GN++RIFNSGGAAY+LNQ +V LLA HLDD C H+ CSWEDV V CLR+ GV A DTRD GRERFHPFTPG HL
Sbjct: 101 NDSHKQLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHL 327
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI) HSP 1 Score: 365 bits (936), Expect = 4.930e-122 Identity = 163/226 (72.12%), Postives = 189/226 (83.63%), Query Frame = 1
Query: 28 DKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
D H+ LL+Q VW GA K TPR+FCGIYTH+ NH TKVKAIKETWA+ CDGFVAFSD DL + +F IKHEGPE + NMWQKSRAIWKYI+FHYK++FDWFVLGGDD+F+IVENLRKYLLSE++K AAGGL NGGTTP+YLGRR R G+DNRI+N+GGA+YVLNQA+V LLA HLDD +C+ H WEDV +G+CL+K GVE FDTRD GRERFHPFTPG H
Sbjct: 204 DDHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHF 429
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI) HSP 1 Score: 348 bits (894), Expect = 8.870e-118 Identity = 159/226 (70.35%), Postives = 183/226 (80.97%), Query Frame = 1
Query: 28 DKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
D H+ LL Q++VW GA + PRIFCGIYTH+ NH TKVKA+KETWA+ CDGFVAFSD DL + +FKIKHEGPE + NMWQK+RAIWKYI+FHYK++FDWFVLGGDD+FLIVENLRKYLLS++IK AAGGL NGG PMYLGRRFR G D RI+N+GG +YVLNQA+V LLA HLDD C+ H WED+ V CL+K GVEAFDTRD GRERFHPFTP H
Sbjct: 52 DDHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGED-RIYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHF 276
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE) HSP 1 Score: 342 bits (878), Expect = 2.830e-114 Identity = 155/235 (65.96%), Postives = 187/235 (79.57%), Query Frame = 1
Query: 1 SLARSPHRSDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
S +++ +D H+++L+ V+VW GA+K PRIFCGI+THK NH+TKVKAIKETWA CDGFVAFSD D + +F+I+HEGPE + NMWQKSRAIWKYI+FHYK +FDWF+LGGDD+F+IVENLRKYLLS+DI AAGG NGG PMYLGRR RP +D IFNSGGA+YVLNQA+V LLA +LD+ C+ H+ SWEDV V CL+K GV AFDTRD GRERFHP+TP H
Sbjct: 117 SSSKACGTNDDHKEMLSHVDVWEGASKTMPRIFCGIFTHKKNHFTKVKAIKETWAANCDGFVAFSDAADPDLHTFQIEHEGPEEYDNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHF 351
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI) HSP 1 Score: 344 bits (882), Expect = 5.790e-114 Identity = 156/235 (66.38%), Postives = 186/235 (79.15%), Query Frame = 1
Query: 1 SLARSPHRSDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
S AR+ +D H+ +L V+VW GA+K PRIFCGI+TH+ NH+TKVKAIKETWA CDGFVAFSD D + +F+I+HEGPE +GNMWQKSRAIWKYI+FHYK +FDWF+LGGDD+F+IVENLRKYLLS++I AAGG NGG PMYLGRR RP +D IFNSGGA+YVLNQA+V LLA +LD+ C+ H+ SWEDV V CL+K GV AFDTRD GRERFHP+TP H
Sbjct: 169 SSARACAMNDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHF 403
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI) HSP 1 Score: 335 bits (859), Expect = 2.000e-111 Identity = 152/227 (66.96%), Postives = 180/227 (79.30%), Query Frame = 1
Query: 25 SDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
+D H+ LL QV+VW A +PR+FCGIYTH+ NH TKV AIKETWA CDGFVAFSD D + SFKIKHEGPE + NMWQKSRAIWKYI+FHYK++FDWFVLGGDD+FLI+ENLRKYLLS++I AAGGL NGGT PM+LGRR + G +RI+N+GGA+YV+NQA+V LL HLDD +C+ H SWEDV V CL+ GV AFDTRD GRERFHPF+P H+
Sbjct: 126 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHI 352
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI) HSP 1 Score: 335 bits (859), Expect = 2.290e-106 Identity = 152/227 (66.96%), Postives = 177/227 (77.97%), Query Frame = 1
Query: 25 SDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
+D H+ LL QV VW GAAK PRIFCGI T NH T VKAIKETWA+ CDGFVAFSD+ D + + KIK EG E GNMWQKSRAIWKYI+FHYKE+FDWF+LGGDD+FLI ENLRKYLLS+++K+A GG+ NGG PMYLGRR R G D+R++N+G A+YVLNQA+V LLA HLDD +C+ HR WED+ V CL+K GV AFDTRD GRERFHPFTP H
Sbjct: 193 NDDHQKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKAIKETWASHCDGFVAFSDKTDQELSTLKIKREGLEEEGNMWQKSRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGIKNGGANPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHF 419
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE) HSP 1 Score: 330 bits (847), Expect = 3.180e-106 Identity = 153/231 (66.23%), Postives = 178/231 (77.06%), Query Frame = 1
Query: 22 RSDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVK---AIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
R+D H+ LL QV VW GAAK PRIFCGI T NH T VK AIKETWA+ CDGFVAFSD+ D + + KIK EG E GNMWQK RAIWKYI+FHYKE+FDWF+LGGDD+FLI ENLRKYLLS+++K+A GG+ NGGT PMYLGRR R G D+R++N+G A+YVLNQA+V LLA HLDD +C+ HR WED+ V CL+K GV AFDTRD GRERFHPFTP H
Sbjct: 213 RNDDHKKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKVGRAIKETWASHCDGFVAFSDKTDQDLNTLKIKREGLEEDGNMWQKIRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGINNGGTNPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHF 443
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE) HSP 1 Score: 314 bits (805), Expect = 3.580e-103 Identity = 151/240 (62.92%), Postives = 177/240 (73.75%), Query Frame = 1
Query: 25 SDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRK-YLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDV------------QVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHL 705
+D H+ LL QV+VW A +PR+FCGIYTH NH TKV AIKETWA CDGFVAFSD D + S IKHEGPE + NMWQKSRAIWKYI+FHYK++FDWFVLGGDD+FLIVENLRK YLLS++I AAGGL NGGT P++LGRR + G +RI+N+GGA+YV+NQA+V LL HLDD C+ H SWEDV +V CLR GV AFDTRD GRERFHPF+P H+
Sbjct: 121 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHHKNHATKVMAIKETWARHCDGFVAFSDVADDAILS--IKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKVYLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHI 358
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Match: A0A7S2V9L2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9L2_9STRA) HSP 1 Score: 251 bits (641), Expect = 1.330e-80 Identity = 117/215 (54.42%), Postives = 145/215 (67.44%), Query Frame = 1
Query: 64 WGGAAKATPRIFCGIYTHKANHYTKVKAIKETWATRCDGFVAFSDEVDLRVPSFKIKHEGPETWGNMWQKSRAIWKYIDFHYKENFDWFVLGGDDIFLIVENLRKYLLSEDIKTAAGGLTNGGTTPMYLGRRFRPRGNDNRIFNSGGAAYVLNQAAVSLLAQHLDDKECEAHRVCSWEDVQVGNCLRKFGVEAFDTRDCFGRERFHPFTPGHHLK 708
W K P+I C YT H TKVKA K TWA+RCDGF+ SD D VPS K+ H+GPE + N+WQK RA WKY+ +HY++ FDWF +GGDD ++IVENLRKYLLS++I+ A G P+YLGRRF+P+ D IFNSGGA +VLN+ A+ +L LD + C + WEDVQV CLR GV +DTRD +GRERF PF PGHH K
Sbjct: 5 WPKGVKTEPKILCITYTISKYHKTKVKAQKHTWASRCDGFIVISDTDDFVVPSVKVPHQGPEEYNNIWQKVRAAWKYVYYHYRDEFDWFYMGGDDTYVIVENLRKYLLSQEIQQAH----KHGKLPLYLGRRFKPK--DGNIFNSGGAGHVLNRRALEILTLSLDSQFCNPNLKGFWEDVQVAKCLRHHGVYPYDTRDDWGRERFLPFAPGHHYK 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4261.10893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4261.10893.1 >prot_H-paniculata_contig4261.10893.1 ID=prot_H-paniculata_contig4261.10893.1|Name=mRNA_H-paniculata_contig4261.10893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=237bp SLARSPHRSDKHRDLLNQVEVWGGAAKATPRIFCGIYTHKANHYTKVKAIback to top mRNA from alignment at H-paniculata_contig4261:12663..15845+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4261.10893.1 ID=mRNA_H-paniculata_contig4261.10893.1|Name=mRNA_H-paniculata_contig4261.10893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3183bp|location=Sequence derived from alignment at H-paniculata_contig4261:12663..15845+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4261:12663..15845+ >mRNA_H-paniculata_contig4261.10893.1 ID=mRNA_H-paniculata_contig4261.10893.1|Name=mRNA_H-paniculata_contig4261.10893.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1422bp|location=Sequence derived from alignment at H-paniculata_contig4261:12663..15845+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |