mRNA_H-paniculata_contig4261.10892.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4261.10892.1
Unique NamemRNA_H-paniculata_contig4261.10892.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 9.310e-83
Identity = 134/167 (80.24%), Postives = 146/167 (87.43%), Query Frame = 3
Query:  147 PQSG--LPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQPLQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 641
            PQ G  LP+F  W+P+PA GAA+A   P    +SCGFKLIMGTVGGAGMGFVFG+FLG MGDMQPLQM+NGREVPQAP REQ RL YKQTA+RSL M RNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFG+KQGPQAAC GC+GMA FSA+MDK+MGH
Sbjct:   26 PQLGSRLPFFLPWVPRPAAGAADAMPTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 201 bits (511), Expect = 7.220e-59
Identity = 107/161 (66.46%), Postives = 121/161 (75.16%), Query Frame = 3
Query:  159 LPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQPLQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 641
            LP  K W  +   G     +PP    +SCG +LIMGT GG GMG +FG+FLG MGDMQP+Q++NGREVPQAPL EQ R  Y  T  RSLGMA+NFASFSAIFM SECVIEKMRGK DMMNSVY GC TG AFGIK GP+ A  GCLGMAAFSA++D +MGH
Sbjct:   42 LPTVKAWDMRT--GGTMPPQPPALG-ESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: W7TL11_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL11_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.680e-40
Identity = 85/176 (48.30%), Postives = 110/176 (62.50%), Query Frame = 3
Query:  114 RSNIAFLGPWSPQSGLPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 638
            + ++ F  P  P   LP++K       P    A  PP N  ++C  + + G V GAG+G + GIFLG MGDM P + ++NGRE PQAP  EQ+RL Y+ T ER    ARNF + +A+F G +CV+EK RGK D  N+V +GC  GAA   KQGPQAAC GC G AAFS IM+ +MG
Sbjct:   33 KPDLLFTSP--PPFPLPFYKYVSLPQTPAGMVAVAPP-NPQENCVGRSVFGAVAGAGLGVMMGIFLGAMGDMSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGVDCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIMEVVMG 205          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.630e-39
Identity = 83/171 (48.54%), Postives = 108/171 (63.16%), Query Frame = 3
Query:  132 LGPWSPQSGLPWFKVWMPKPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 641
            L P+   + LP+   WMP    GA E         +SCG K  +G  GGA MG + G+FLG M DM P + ++NG+EVPQAPL+EQ R   + T E+ +  +RNFA  + +F GSEC++EK RGK D+ N V +GC TGAA   KQGPQAA  GC G AAFS ++D +MGH
Sbjct:   51 LNPYFNTTRLPYLIPWMPT-FNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV)

HSP 1 Score: 144 bits (363), Expect = 2.230e-36
Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 3
Query:  159 LPWFKVWMPKPAPGAAEAERPPGN---AMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 641
            LP+   W P P P A+ AE PP +     +SCG K  +G  GGA  G   G+FLG M DM P + ++NG+EVPQAPL+EQ+R   + T E+ +  +RNFA  + +F G+EC++EK RGK D+ NS   GC TGAA   KQGPQAA  GC G A FS ++D +  H
Sbjct:   97 LPYLTPWYPIPGPNAS-AEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 143 bits (361), Expect = 2.990e-36
Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = 3
Query:  156 GLPWFKVWMPKPAPGAAEAERPPGN--AMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 638
            GLP+ + W       A+ AE PP      +SCG K  +G +GG  MG V G+FLG + DM P + ++ G+EVPQAPL+EQ+R   + TA++SL   R FA  + +F GSEC++EK RGK D+ NSV +GC TGAA   KQGPQA+ AGC G A FS ++D  MG
Sbjct:   83 GLPYPQPWA---RANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.730e-36
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 3
Query:  222 PGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 641
            PG A +SC  + ++G+  G  MG V G+FLG MGD+ P +  V G+E PQ PL EQ R  Y+ TAERS+G AR+F + +A+F G+ECVIEK RG+ D  N V +GCA GA      GP AAC GC G AAFSA  + +MGH
Sbjct:   51 PGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 143 bits (360), Expect = 7.050e-36
Identity = 78/163 (47.85%), Postives = 104/163 (63.80%), Query Frame = 3
Query:  159 LPWFKVWMPKPAPGAAEAERPPGNAM--DSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 638
            LP+F+ W P   P     + PP      +SCG K  +G  GG  MG + G+FLG M DM P + ++ G+EVPQAPL+EQ+R   + TAE+S+   R FA  + +F GSEC++EK RGKTD+ NSV +GC TGAA   K GP +A  GC G AAFS ++D +MG
Sbjct:  105 LPYFQPWKPTSGP----EQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.850e-36
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 3
Query:  153 SGLPWFKVWMPKPAPGAAEAER---PP--GNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMG 638
            +G+P    +M  P P  A +     PP  G   +SC  K  +G +GG+  G V G+FLG M DM P + ++NG+EVPQAPLREQ+R   + T E+SL  ARNFA  + +F G++C++EK RG  D+ NSV +GC TGAA   KQGPQAA  GC G AAFS ++DK+MG
Sbjct:   68 TGIPPQAQYMAYPVPWRATSGPDYLPPDFGWLSESCAGKTAIGVLGGSVCGLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235          
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.140e-35
Identity = 80/167 (47.90%), Postives = 102/167 (61.08%), Query Frame = 3
Query:  150 QSGLPWFKVWMPKPAPGAAEAERPPGNA--MDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP-LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIMGH 641
            +  LP+F  W     P     E PP  A  MD C  K  +G  GG  MG + G+FLG + D QP +Q+  G++VPQAP +EQ R   + TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA     GPQAA  GC G AAFS ++DKIMG+
Sbjct:  108 RKSLPYFMPWKTSGGP----TEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4261.10892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE9.310e-8380.24Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA7.220e-5966.46Mitochondrial import inner membrane translocase su... [more]
W7TL11_9STRA4.680e-4048.30Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA3.630e-3948.54Mitochondrial import inner membrane translocase su... [more]
A0A7S2AAN4_TRICV2.230e-3647.88Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC2.990e-3648.78Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA4.730e-3651.77Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA7.050e-3647.85Mitochondrial import inner membrane translocase su... [more]
A0A7S3VGZ9_9STRA8.850e-3648.81Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA1.140e-3547.90Mitochondrial import inner membrane translocase su... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4261contigH-paniculata_contig4261:6975..9528 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.9
Seed ortholog evalue7.6e-69
Seed eggNOG ortholog2880.D7G569
Preferred nameTIMM22
KEGG rclassRC00017
KEGG koko:K01094,ko:K17790
KEGG TC3.A.8.1
KEGG ReactionR02029
KEGG Pathwayko00564,ko01100,map00564,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005886,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019866,GO:0022804,GO:0022857,GO:0022884,GO:0030943,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042721,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098796,GO:0098798,GO:0098800,GO:1904680,GO:1990542
EggNOG free text desc.Mitochondrial import inner membrane translocase subunit
EggNOG OGsCOG5596@1,KOG3225@2759
Ec32 ortholog descriptionMitochondrial import inner membrane translocase subunit TIM22 homolog
Ec32 orthologEc-14_006420.1
EC3.1.3.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029
Exons4
Model size1395
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4261.10892.1prot_H-paniculata_contig4261.10892.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4261 7726..9493 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930295.5613453-UTR-H-paniculata_contig4261:6974..77251622930295.5613453-UTR-H-paniculata_contig4261:6974..7725Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4261 6975..7725 -
1691481229.76452-UTR-H-paniculata_contig4261:6974..77251691481229.76452-UTR-H-paniculata_contig4261:6974..7725Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4261 6975..7725 -
1622930295.6513958-UTR-H-paniculata_contig4261:9493..95281622930295.6513958-UTR-H-paniculata_contig4261:9493..9528Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4261 9494..9528 -
1691481229.8148077-UTR-H-paniculata_contig4261:9493..95281691481229.8148077-UTR-H-paniculata_contig4261:9493..9528Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4261 9494..9528 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930295.5783124-CDS-H-paniculata_contig4261:7725..79131622930295.5783124-CDS-H-paniculata_contig4261:7725..7913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 7726..7913 -
1691481229.7784774-CDS-H-paniculata_contig4261:7725..79131691481229.7784774-CDS-H-paniculata_contig4261:7725..7913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 7726..7913 -
1622930295.60437-CDS-H-paniculata_contig4261:8198..82681622930295.60437-CDS-H-paniculata_contig4261:8198..8268Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 8199..8268 -
1691481229.78771-CDS-H-paniculata_contig4261:8198..82681691481229.78771-CDS-H-paniculata_contig4261:8198..8268Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 8199..8268 -
1622930295.6222022-CDS-H-paniculata_contig4261:8638..87481622930295.6222022-CDS-H-paniculata_contig4261:8638..8748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 8639..8748 -
1691481229.798492-CDS-H-paniculata_contig4261:8638..87481691481229.798492-CDS-H-paniculata_contig4261:8638..8748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 8639..8748 -
1622930295.6373708-CDS-H-paniculata_contig4261:9252..94931622930295.6373708-CDS-H-paniculata_contig4261:9252..9493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 9253..9493 -
1691481229.8064497-CDS-H-paniculata_contig4261:9252..94931691481229.8064497-CDS-H-paniculata_contig4261:9252..9493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4261 9253..9493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4261.10892.1

>prot_H-paniculata_contig4261.10892.1 ID=prot_H-paniculata_contig4261.10892.1|Name=mRNA_H-paniculata_contig4261.10892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MVDHNSGKSNEGFGDTRQQQQQQQHQRSNIAFLGPWSPQSGLPWFKVWMP
KPAPGAAEAERPPGNAMDSCGFKLIMGTVGGAGMGFVFGIFLGMMGDMQP
LQMVNGREVPQAPLREQVRLQYKQTAERSLGMARNFASFSAIFMGSECVI
EKMRGKTDMMNSVYAGCATGAAFGIKQGPQAACAGCLGMAAFSAIMDKIM
GH*
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mRNA from alignment at H-paniculata_contig4261:6975..9528-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4261.10892.1 ID=mRNA_H-paniculata_contig4261.10892.1|Name=mRNA_H-paniculata_contig4261.10892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2554bp|location=Sequence derived from alignment at H-paniculata_contig4261:6975..9528- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCACGGTAACCACTAAGGTGCTTTGCTCGACACAATGGTGGATCATAAC AGCGGGAAGAGCAACGAAGGCTTTGGGGATACTCGCCAACAACAACAACA ACAGCAACATCAAAGGTCAAATATAGCGTTTTTAGGCCCATGGTCACCTC AGAGCGGCCTGCCATGGTTCAAGGTGTGGATGCCCAAGCCAGCACCGGGC GCAGCCGAGGCCGAGCGACCGCCGGGGAATGCAATGGATTCATGCGGATT TAAGCTCATCATGGGAACCGTGGGAGGTAACTATCTCGTAGGGTTCGTGT ATTTTTGCTACGCGTTGTGCCTGCCTGATTGCACTTAAGCTCAGGGTTTC TAGGAGAGCTAGGAAGCACGCCTAGGTAGTAAGCCCCCCCCCCCCCTCCT ACAGTGTCGGATGCGGAGTTTCACGGTTCACGCCATCATGTACACCCTTG ACCTCACCTGATTTGCTATGTTCCAGTATCCTTGCTGATCAGTTGACCCG TAAGTGGCCGAGAAAGAAAGTCAGGGTTGTGCCACTCGCCAGCGATGCCG GTGGCCCATTTACCTGTTATACGGCGAGAGTGCAACTGCGCTATACTTTG ACGAATTTGGTTTGCTCATGTTTTACTTGTAAATCAAGCCTCTCTACCCT CTACATGATAGGTAAATAGAGGCAGGCGTTCGGTCCGGCTTGCATCTTGG CGTTGATGCTTGGCTGTGGCATAATGATCTCCAAAACACATCTCACAAGC CGTGTTGTGCTGCCCGGTTGGACGTGACAGGGGCTGGTATGGGGTTCGTG TTTGGTATATTTCTAGGAATGATGGGGGACATGCAACCGTTGCAGATGGT CAACGGGCGAGAGGTACCCCAAGCGCCACTCAGAGAACAGGTGTGTGTGA GTTGTCCAAGCGACAAAATAATCGACAAGTCTAGGTCACATGGTAACCTC GAGGTCTCTGCGCCGACTTTGCACTTGCACACATACATTGTACCATAGTA TGAACGTGTGTATGAGAAAGAAAGAACTTTCTACTTGTCATCGCCTGTAG CTAAACCTGCCGTGCGTTGAGTGTATAGGTCTATACAGCAGCTGAGCAGG AGGTTTAGCACAGTTATTTACGTCAACTACTACATCTCGACATGTGTTTA CTTCGCTTCATCGCCTGCCTGTCGAGCTGTCGAGCTGAACACCAATCGCT ATCATGTGTCGTGCTATTTACGTTGCTTCCATTTTCAATTTTCGTTTCGC ACTGCTGCAGGTGCGGTTGCAATATAAGCAGACCGCGGAGAGATCGCTGG GCATGGCGAGAAATTTTGCCTCGTTCTCTGGTGAGTTCAACCCACAGCAT TTGTTTTGACTACTTCGCTGCAACTTGATTATTCTGTCTGGTAGATCAAA TATATAGCTTGTTATCCAAATTCCACTATCAGAGCGCCCCGAAGCCCCCT GTCCCCGGGGGAGTCATGTGGACCCACTTTTAAAACGGTGTTATTCGGGC CCTGGTTATCGCCGATGCTCTCCATGCAGGGCCTCTGTGTGTACTGTGGC ATAACACATATGTCCTGTCATGTGTCGCCGTTCCTCCCACATTGTTCGCT TGTGCTTTGTCTCAGCAATTTTCATGGGGTCGGAATGTGTGATCGAGAAA ATGCGAGGCAAGACGGACATGATGAATTCCGTGTACGCTGGGTGCGCCAC GGGAGCAGCGTTTGGGATAAAGCAGGGGCCGCAAGCCGCGTGCGCGGGGT GTTTGGGAATGGCGGCATTTTCTGCGATAATGGATAAGATTATGGGGCAT TGAAGAAGTGCGCAGAGCTAAATGCAGTACGAAAATGTTTCTATTTGTTT TTCCCCCTTGTTTCAGTCAGGCGACAGCTGGAAAGTTCTTGCTTGCTAGA TATTTTGAATGTTCTTGTGTTGCAGGTTTCTTCCAGTTGGATGTTCATAA ACTGGTGCCACTGATGTATTGCTCATAGTCGCCACATCCCCGAGATATCT ACCCACGCGGGGTTTACCGGGTTCACGCGCGCTAGATCCCCTACCCCGGT ATACGACGGCCGATGTGGTACGATCTGCGTCGCGGACCAACGTTCCAAGA GAGTTGATGTGAACATGAAGTGCTGAGCCTTAAAGCTCAACAGCTGTACA CCTCAACGTTCTGCGATACGCATTTGGTATCATGTTACTCTGTGTTTCTT ATAGCCTAGGCACGGAGACACAAGTTTTTTGGGCTGTACATTGGTCACTC AAAAGTCTACGGAGTATAGAACTCGTGCTTGAATATAGGTCAGTGGGTGC CGCTGACAATGAAGAGTATTGGCTTTGTAGTATATCGATACAAGCGAGAC AAGCCTGCTGCTATAAGAGCCAAAATAAGTGTATATAACTGAAGATTAAA GTTAGATTCATCACCTCAACATGGGTACGATAGATATACCAAATGAAATT CAGCGTTCGAGGTGATCTGTTTCAGAGTTACCTCACGACTGAGAATCTTG ATTCGTAAAATGAAGGATTTCTTTAATCTTGAAGTCAGTCGGTCATATCG AAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig4261:6975..9528-

>mRNA_H-paniculata_contig4261.10892.1 ID=mRNA_H-paniculata_contig4261.10892.1|Name=mRNA_H-paniculata_contig4261.10892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig4261:6975..9528- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGGATCATAACAGCGGGAAGAGCAACGAAGGCTTTGGGGATACTCG
CCAACAACAACAACAACAGCAACATCAAAGGTCAAATATAGCGTTTTTAG
GCCCATGGTCACCTCAGAGCGGCCTGCCATGGTTCAAGGTGTGGATGCCC
AAGCCAGCACCGGGCGCAGCCGAGGCCGAGCGACCGCCGGGGAATGCAAT
GGATTCATGCGGATTTAAGCTCATCATGGGAACCGTGGGAGATGGTGGAT
CATAACAGCGGGAAGAGCAACGAAGGCTTTGGGGATACTCGCCAACAACA
ACAACAACAGCAACATCAAAGGTCAAATATAGCGTTTTTAGGCCCATGGT
CACCTCAGAGCGGCCTGCCATGGTTCAAGGTGTGGATGCCCAAGCCAGCA
CCGGGCGCAGCCGAGGCCGAGCGACCGCCGGGGAATGCAATGGATTCATG
CGGATTTAAGCTCATCATGGGAACCGTGGGAGGGGCTGGTATGGGGTTCG
TGTTTGGTATATTTCTAGGAATGATGGGGGACATGCAACCGTTGCAGATG
GTCAACGGGCGAGAGGTACCCCAAGCGCCACTCAGAGAACAGGGGCTGGT
ATGGGGTTCGTGTTTGGTATATTTCTAGGAATGATGGGGGACATGCAACC
GTTGCAGATGGTCAACGGGCGAGAGGTACCCCAAGCGCCACTCAGAGAAC
AGGTGCGGTTGCAATATAAGCAGACCGCGGAGAGATCGCTGGGCATGGCG
AGAAATTTTGCCTCGTTCTCTGGTGCGGTTGCAATATAAGCAGACCGCGG
AGAGATCGCTGGGCATGGCGAGAAATTTTGCCTCGTTCTCTGCAATTTTC
ATGGGGTCGGAATGTGTGATCGAGAAAATGCGAGGCAAGACGGACATGAT
GAATTCCGTGTACGCTGGGTGCGCCACGGGAGCAGCGTTTGGGATAAAGC
AGGGGCCGCAAGCCGCGTGCGCGGGGTGTTTGGGAATGGCGGCATTTTCT
GCGATAATGGATAAGATTATGGGGCATTGACAATTTTCATGGGGTCGGAA
TGTGTGATCGAGAAAATGCGAGGCAAGACGGACATGATGAATTCCGTGTA
CGCTGGGTGCGCCACGGGAGCAGCGTTTGGGATAAAGCAGGGGCCGCAAG
CCGCGTGCGCGGGGTGTTTGGGAATGGCGGCATTTTCTGCGATAATGGAT
AAGATTATGGGGCATTGA
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