prot_H-paniculata_contig42608.10890.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: UPI001F0214A0 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F0214A0) HSP 1 Score: 66.2 bits (160), Expect = 1.120e-9 Identity = 44/148 (29.73%), Postives = 70/148 (47.30%), Query Frame = 0
Query: 3 NQKKTKKDRRLCWVCGSSEHIARRCPKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLIST 150
N KK + C CG H A C + +G ++ T + + A+ + NP KE W D+GAT H+ + + Y PA P + N +EG+G+++L+++ +V LN V HVPE+R+NL+ST
Sbjct: 245 NYPNKKKFKGNCHNCGKIGHKAADCRAPKKEKKKGQANMVETNEDVDDLCAMLSECNLVGNP-----KEWW-IDSGATRHICAVREAFASYAPAGPDETIYMGNSATAKIEGYGKIMLKMTSG----KVVTLNNVCHVPEIRKNLVST 382
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: UPI000905CD14 (uncharacterized protein LOC109226016 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI000905CD14) HSP 1 Score: 57.0 bits (136), Expect = 1.430e-6 Identity = 38/124 (30.65%), Postives = 63/124 (50.81%), Query Frame = 0
Query: 29 KRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVT--REKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLIST 150
KR T E + L + KA ++K+ N + +E W D+GAT H+ +++ Y P P +AN +EG G++VL+++ +++ LNKV HVPE+R+NL+ T
Sbjct: 174 KRKEMTLEDLIVCLRIEEDNKAA-----EKKSRGNSTIMVGNARECW-IDSGATRHVCANKEFFTSYAPGGPNNTVFMANSATAKIEGTGKIVLKMTS----VKIVTLNKVLHVPEMRKNLVPT 287
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A284S1T9_ARMOS (Integrase catalytic domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284S1T9_ARMOS) HSP 1 Score: 55.8 bits (133), Expect = 4.060e-6 Identity = 45/130 (34.62%), Postives = 59/130 (45.38%), Query Frame = 0
Query: 29 KRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATDTSG 158
+R T + A A IK A A TD +PA++ HWN+DTGA+ HMT Y+P + +A+ T + EG G +VL GE V L HVP LR NL+S T G
Sbjct: 275 RRQKGTGKREAANSADIKEETASQASTDPS----SPAMS----HWNTDTGASRHMTPHRHWFNVYSPHIVPIR--LADNTVIYSEGIGTVVLEPEVEGEKSTVVELLDTLHVPALRNNLLSPYHLTREKG 394
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438D407_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438D407_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 4.460e-6 Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 0
Query: 14 CWVCGSSEHIARRC--PKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATD 155
CW CG + H R+C PK+ ++ + AVT++ + AV + W D+GA+ H TS ++Y G + +A+G+ + V G G + R+S P V +L KV H+P+LRRNLIS + D
Sbjct: 166 CWNCGKTGHFKRQCKSPKKKNEDDSAN--------------AVTEEVQDALLLAVDSPLDDWVLDSGASFHTTSHREIIQNYVAGDFGKV-YLADGSALDVVGLGDV--RISLPNG--SVWLLEKVRHIPDLRRNLISVGQLDD 290
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438H787_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H787_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 4.480e-6 Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 0
Query: 14 CWVCGSSEHIARRC--PKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATD 155
CW CG + H R+C PK+ ++ + AVT++ + AV + W D+GA+ H TS ++Y G + +A+G+ + V G G + R+S P V +L KV H+P+LRRNLIS + D
Sbjct: 239 CWNCGKTGHFKRQCKSPKKKNEDDSAN--------------AVTEEVQDALLLAVDSPLDDWVLDSGASFHTTSHREIIQNYVAGDFGKV-YLADGSALDVVGLGDV--RISLPNG--SVWLLEKVQHIPDLRRNLISVGQLDD 363
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438DW21_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DW21_VITVI) HSP 1 Score: 55.5 bits (132), Expect = 5.840e-6 Identity = 44/144 (30.56%), Postives = 69/144 (47.92%), Query Frame = 0
Query: 14 CWVCGSSEHIARRC--PKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATD 155
CW CG + H R+C PK+ ++ + A+T++ AV + W D+GA+ H T ++Y G + +A+G+ + V G G + R+S P V +L KV H+P+LRRNLIS R+ D
Sbjct: 239 CWNCGKTGHFKRQCKSPKKKNEDDSAN--------------AITEEVHDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYIAGDFGKV-YLADGSALDVVGLGDI--RISLPNG--SVWLLEKVRHIPDLRRNLISVRQLDD 363
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438EZF0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EZF0_VITVI) HSP 1 Score: 55.5 bits (132), Expect = 6.080e-6 Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 0
Query: 14 CWVCGSSEHIARRC--PKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATD 155
CW CG + H R+C PK+ +D ++ T A+ ++ + AV + W D+GA+ H T ++Y G + +A+G+ + V G G + R+S P V +L KV H+P+LRRNLIS + D
Sbjct: 239 CWNCGKTGHFKRQCKNPKKKND-DDSTNAVTEEVQDALLL-------------AVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKV-YLADGSALDVVGLGDV--RISLPNG--SVWLLEKVRHIPDLRRNLISVGQLDD 363
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438KBI6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KBI6_VITVI) HSP 1 Score: 55.1 bits (131), Expect = 6.760e-6 Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query: 14 CWVCGSSEHIARRCPKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLIS 149
CW CG + H R+C K NE A + T K A+ V D +P + W D+GA+ H T ++Y G + +A+G+ + V G G + R+S P V +L KV H+P+LRRNLIS
Sbjct: 193 CWNCGKTGHFKRQC-KSPKKKNEDDSANVVTEKVHDALLLVVD------SPL-----DDWVLDSGASFHTTPHREIIQNYVAGDFGKV-YLADGSTLDVVGIGDV--RISLPNR--SVWLLEKVRHIPDLRRNLIS 311
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438GLU8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GLU8_VITVI) HSP 1 Score: 55.1 bits (131), Expect = 8.090e-6 Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = 0
Query: 14 CWVCGSSEHIARRC--PKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATD 155
CW CG + H R+C PK+ ++ + AVT++ + T AV + W D GA+ H T ++Y G + +A+G+ + V G G + R+S P V +L KV H+P+LRRNLIS + D
Sbjct: 239 CWNCGKTGHFKRQCKNPKKKNEDDSAN--------------AVTEEVQDTLLLAVDSPLDDWVLDLGASFHTTPHREIIQNYVAGDFGKV-YLADGSALDVVGLGDV--RISLPNG--SVWLLEKVRHIPDLRRNLISVGQLDD 363
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Match: A0A438GDP4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GDP4_VITVI) HSP 1 Score: 55.1 bits (131), Expect = 8.140e-6 Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = 0
Query: 14 CWVCGSSEHIARRC--PKRHHDTNEGTVALLATIKGPKAMTAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDEISSEDYTPALPGTMCVIANGTFVPVEGWGRLVLRVSQPGEILRVPVLNKVAHVPELRRNLISTRRATD 155
CW CG + H R+C PK+ ++ + AVT++ + AV + W D+GA+ H T ++Y G + +ANG+ + V G G + R+S P V +L KV H+P+LRRNLIS + D
Sbjct: 155 CWNCGKTCHFKRQCKSPKKKNEDDSAN--------------AVTEEVQDALFLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKV-YLANGSALDVVGLGDV--RISLPNG--SVWLLEKVRHIPDLRRNLISVGQLDD 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42608.10890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig42608.10890.1 ID=prot_H-paniculata_contig42608.10890.1|Name=mRNA_H-paniculata_contig42608.10890.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bpback to top |