prot_H-paniculata_contig4259.10882.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4259.10882.1
Unique Nameprot_H-paniculata_contig4259.10882.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.770e-18
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    7 GGTSFPPTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVV 70
            GG  F PTLD+E Y+T P M+EL  M K+ L +V+GF VSR GYGSI WKEPVDLR VDIG VV
Sbjct: 1017 GGNDFAPTLDLEEYKTEPSMAELAKMTKDELAAVSGFVVSRQGYGSIAWKEPVDLRGVDIGSVV 1080          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: R7QFR8_CHOCR (Peptidase S59 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFR8_CHOCR)

HSP 1 Score: 61.6 bits (148), Expect = 2.090e-9
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 DTDVGVGGTSFPPTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVN 71
            D+D       + P L  EG+ T P M+EL +     L+SV  F V R G+G I+W EPVD+R +D+ LVV+
Sbjct:  638 DSDDQYNPDKYLPYLTKEGFYTVPSMAELASRTMKELQSVENFTVGRKGFGEIQWIEPVDVRGLDLDLVVD 708          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A7S2PE42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PE42_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.870e-9
Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   13 PTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVV 70
            P L   GY+  P M+EL AM +  L +V GFKV RPG+GS+ W   VD+R VDI   V
Sbjct:  349 PKLTKRGYDVYPSMAELEAMSEAELATVIGFKVERPGFGSVAWDGAVDVREVDIDAEV 406          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: K0S9G7_THAOC (Peptidase S59 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9G7_THAOC)

HSP 1 Score: 61.2 bits (147), Expect = 2.900e-9
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   13 PTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVV 70
            P L   GY   PPM+EL +M +  L +V+GFKV RPG+GS+ W   VD+R VD+   V
Sbjct:  652 PKLTKAGYTIHPPMNELESMSEADLTAVSGFKVERPGFGSVSWDGAVDVRGVDVDTSV 709          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A196S889_BLAHN (Nucleoporin n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S889_BLAHN)

HSP 1 Score: 56.6 bits (135), Expect = 1.210e-7
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   13 PTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVN 71
            PTL   GYE TP ++ L AMD+ +L  V    +   G G +EW+EPVDLR +D+  +V+
Sbjct:  529 PTLTKPGYEITPSLATLNAMDEEALSHVDKVSICVEGVGKVEWEEPVDLRGLDLDALVS 587          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A196SIN3_BLAHN (Nucleoporin n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SIN3_BLAHN)

HSP 1 Score: 56.6 bits (135), Expect = 1.220e-7
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   13 PTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVN 71
            PTL   GYE TP ++ L AMD+ +L  V    +   G G +EW+EPVDLR +D+  +V+
Sbjct:  828 PTLTKPGYEITPSLATLNAMDEEALSHVDKVSICVEGVGKVEWEEPVDLRGLDLDALVS 886          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A7S1YNB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNB7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.250e-7
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 0
Query:   13 PTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVV 70
            P L  EGY+ TP +  +  M +  L  V+GF VSRPG G I+W   VD+R VD+  VV
Sbjct:   71 PKLTREGYKVTPSIDAMSNMTEAELACVSGFSVSRPGLGRIDWDGAVDVRGVDLDSVV 128          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A383VN41_TETOB (Peptidase S59 domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VN41_TETOB)

HSP 1 Score: 55.1 bits (131), Expect = 4.340e-7
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   19 GYETTPPMSELVAM---DKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVVN 71
            GY T P   EL A+   +  +L  ++GF+V RPGYG++EW  PVD+R VD+G +++
Sbjct:  822 GYSTEPGGKELQALAAQNPAALSRLSGFRVERPGYGTLEWLAPVDVRGVDLGEIIS 877          
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Match: A0A7S0BWX7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWX7_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.320e-5
Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   13 PTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGYGSIEWKEPVDLRRVDIGLVV 70
            PTL    Y  +P +++L  M + SL +V  F +SRP  GS+EW+  VD+R +++ L++
Sbjct:  257 PTLTKTDYIISPTLTQLSTMSEASLATVPNFTISRPQIGSVEWEGAVDIRSLNLDLLI 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4259.10882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5K9B1_9PHAE1.770e-1865.63Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
R7QFR8_CHOCR2.090e-942.25Peptidase S59 domain-containing protein n=1 Tax=Ch... [more]
A0A7S2PE42_9STRA2.870e-950.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
K0S9G7_THAOC2.900e-948.28Peptidase S59 domain-containing protein n=1 Tax=Th... [more]
A0A196S889_BLAHN1.210e-744.07Nucleoporin n=1 Tax=Blastocystis sp. subtype 1 (st... [more]
A0A196SIN3_BLAHN1.220e-744.07Nucleoporin n=1 Tax=Blastocystis sp. subtype 1 (st... [more]
A0A7S1YNB7_9STRA2.250e-746.55Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A383VN41_TETOB4.340e-744.64Peptidase S59 domain-containing protein n=2 Tax=Te... [more]
A0A7S0BWX7_9STRA1.320e-537.93Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036903Peptidase S59, nucleoporin superfamilyGENE3D3.30.1610.10coord: 12..71
e-value: 2.2E-14
score: 55.3
IPR036903Peptidase S59, nucleoporin superfamilySUPERFAMILY82215C-terminal autoproteolytic domain of nucleoporin nup98coord: 10..70
IPR007230Peptidase S59, nucleoporinPFAMPF04096Nucleoporin2coord: 18..69
e-value: 7.6E-13
score: 48.8
IPR007230Peptidase S59, nucleoporinPROSITEPS51434NUP_Ccoord: 17..71
score: 21.468
IPR037665Nucleoporin peptidase S59-likePANTHERPTHR23198NUCLEOPORINcoord: 12..66
IPR037637Nuclear pore complex protein NUP98-NUP96PANTHERPTHR23198:SF6NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96coord: 12..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4259contigH-paniculata_contig4259:364..576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4259.10882.1mRNA_H-paniculata_contig4259.10882.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4259 364..576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4259.10882.1 ID=prot_H-paniculata_contig4259.10882.1|Name=mRNA_H-paniculata_contig4259.10882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
DTDVGVGGTSFPPTLDMEGYETTPPMSELVAMDKNSLRSVTGFKVSRPGY
GSIEWKEPVDLRRVDIGLVVN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036903Peptidase_S59_sf
IPR007230Peptidase_S59
IPR037665Nucleoporin_S59-like
IPR037637NUP98-NUP96