prot_H-paniculata_contig4256.10878.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4256.10878.1
Unique Nameprot_H-paniculata_contig4256.10878.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A6H5L8D6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D6_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.910e-15
Identity = 40/111 (36.04%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    6 GAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPL 109
            GA+SW SR QK     T+EA+Y+AL   VK+++FL Q   FM P + +  + +F+DN+ AI+L     ++  +KH+ ++HH+VR+  + +++ V +       AD L K L
Sbjct:  303 GAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQFWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHVDVRHHLVRELVERKEISVIHVPRRYQRADFLTKSL 413          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A0A9XJD8_LYGHE (Copia protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XJD8_LYGHE)

HSP 1 Score: 72.0 bits (175), Expect = 1.010e-13
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 0
Query:    3 LAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPL 109
            L   AISW SR Q+  A  + EA+Y+AL+++ K+   L +     E +   GAVN++ DN+ AI LT      RRTKHI I++H VR+  +   V + Y       AD+L KPL
Sbjct:    5 LGNAAISWESRKQRTVALSSCEAEYMALAEASKEATALKRI--LREVTGVNGAVNLYNDNQGAIALTENPVHHRRTKHIDIRYHFVRETVERGDVSIKYVPTEHMVADILTKPL 116          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A7R9UQB3_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQB3_DIALT)

HSP 1 Score: 71.6 bits (174), Expect = 7.500e-13
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 0
Query:    8 ISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASD-----VEKVRVA--YADLLIKPLDMA 112
            ISWHS +Q   +  + EA+Y+ALS+  ++V +L    +F+ P  +     +F+DN+  I L N     RRTKH+ +K+H VRDA +     V KV  +  +AD++ K  D A
Sbjct:  102 ISWHSGLQSTISLSSCEAEYVALSECCREVDYLRSIIDFL-PQPSASPTEIFEDNQGTIDLVNNPVHHRRTKHVEVKYHYVRDAQEKGRIVVSKVHTSLNHADIMTKATDNA 212          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A7R9UMU9_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UMU9_DIALT)

HSP 1 Score: 71.6 bits (174), Expect = 9.030e-13
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 0
Query:    8 ISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASD-----VEKVRVA--YADLLIKPLDMA 112
            ISWHS +Q   +  + EA+Y+ALS+  ++V +L    +F+ P  +     +F+DN+  I L N     RRTKH+ +K+H VRDA +     V KV  +  +AD++ K  D A
Sbjct:  115 ISWHSGLQSTISLSSCEAEYVALSECCREVDYLRSIIDFL-PQPSASPTEIFEDNQGTIDLVNNPVHHRRTKHVEVKYHYVRDAQEKGRIVVSKVHTSLNHADIMTKATDNA 225          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A4Y2H1X2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H1X2_ARAVE)

HSP 1 Score: 70.1 bits (170), Expect = 8.880e-12
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 0
Query:    1 MMLAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQA-QEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPLDMAK 113
            + +  G ++W S+ Q   ++ T+EA+YIA S +VK+V++L Q  Q+  E  +    + +F DN+ AIKL       +RTKHI +++H +R+  D   V + Y       AD+  K L   K
Sbjct:  222 VFILNGPVTWCSQKQSTVSTSTTEAEYIATSTAVKEVLWLRQLLQDVSEIELCDEGITLFVDNQSAIKLIKNPVFHKRTKHIDVRYHFIREKCDDGSVNIKYVKSEEQLADIFTKALPKVK 342          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A336N465_CULSO (CSON011514 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336N465_CULSO)

HSP 1 Score: 70.1 bits (170), Expect = 1.160e-11
Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    6 GAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQA-QEF---MEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPL 109
            G ISW SR Q + A  ++EA+Y+ALS++ K+V+++    Q+F   +EP  TI     + DN+  IK+   +  S RTKHI +K+H++++ +    + ++Y       AD+L KPL
Sbjct: 1012 GVISWASRKQDVVAQSSTEAEYVALSETCKEVLWIKDLIQDFELDIEPCTTI-----YTDNQGCIKMIKDQKFSNRTKHIDVKYHLIKEHAQQRNIELSYCTTTSNIADMLTKPL 1121          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A1Y1MYL8_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MYL8_PHOPY)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-11
Identity = 38/119 (31.93%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    2 MLAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPLDMAK 113
            ML  GAI+W S+ Q+  +  T+EA+Y+A + + K++M+L      +   +   A  +F DN+ A++L       +RTKHI +K H +R+  +  ++ V Y       AD++ KPL + K
Sbjct: 1159 MLHGGAITWSSQRQQTVSLSTTEAEYVAAANASKELMWLRSFLREIHEDVVDDATKLFVDNQSAVRLVQNAEFHKRTKHIDVKFHFIREQQERGEIDVTYVESDKQLADIMTKPLSINK 1277          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A0V1M1K0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Trichinella TaxID=6333 RepID=A0A0V1M1K0_9BILA)

HSP 1 Score: 69.3 bits (168), Expect = 2.170e-11
Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    2 MLAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAYAD 103
            M A GA+SWHS+ Q+  A  T+EA+Y+A S++ KD+M+LM    F E +       +F DN  A+KL+      +R+KHI ++ H VR+  +  K+ + + D
Sbjct: 1172 MCAGGAVSWHSQKQRSVALSTTEAEYVAASEAAKDMMWLMTL--FAEVTEVKQKPILFVDNMGAVKLSKNPEFHKRSKHIDVRFHFVREKYNEGKINIQHID 1271          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 69.3 bits (168), Expect = 2.180e-11
Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 0
Query:    2 MLAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPLDMAK 113
            +L  G ISW S+ Q+  A  ++EA+Y+ALS++ ++ ++L      +      GA+ VF+DN+ AI L       +RTKHI I++H VR+  +  +V + Y       ADL+ KPL  A+
Sbjct: 1252 VLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCPTQEMLADLMTKPLAAAQ 1370          
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Match: A0A5N6MPT1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MPT1_9ASTR)

HSP 1 Score: 68.6 bits (166), Expect = 2.290e-11
Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 0
Query:    2 MLAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPSMTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVAY-------ADLLIKPLDM 111
            +L+K AISW SR Q+I    ++EA+Y+A +     VM+L    E +E   +I  VN++ DN+  IKL+      RRTKHI +++H +R+     K+++ +       AD++ KP+ +
Sbjct:  164 ILSKAAISWSSRKQEIVTLSSTEAEYVAATNCACHVMWLKGLLEEIE-GKSIEKVNIYCDNDSTIKLSKNPIMHRRTKHIDVRYHYLRELVADGKIKLVFCSTKDQIADVMTKPVKL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4256.10878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8D6_9PHAE2.910e-1536.04Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A0A9XJD8_LYGHE1.010e-1339.47Copia protein (Fragment) n=1 Tax=Lygus hesperus Ta... [more]
A0A7R9UQB3_DIALT7.500e-1336.61Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A7R9UMU9_DIALT9.030e-1336.61Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A4Y2H1X2_ARAVE8.880e-1233.06Retrovirus-related Pol polyprotein from transposon... [more]
A0A336N465_CULSO1.160e-1135.65CSON011514 protein n=1 Tax=Culicoides sonorensis T... [more]
A0A1Y1MYL8_PHOPY1.170e-1131.93Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
A0A0V1M1K0_9BILA2.170e-1137.25Retrovirus-related Pol polyprotein from transposon... [more]
A0A8K1FHK1_PYTOL2.180e-1135.29Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A5N6MPT1_9ASTR2.290e-1134.19Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4256contigH-paniculata_contig4256:8725..9066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4256.10878.1mRNA_H-paniculata_contig4256.10878.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4256 8425..9066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4256.10878.1 ID=prot_H-paniculata_contig4256.10878.1|Name=mRNA_H-paniculata_contig4256.10878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MMLAKGAISWHSRMQKITASGTSEAKYIALSKSVKDVMFLMQAQEFMEPS
MTIGAVNVFQDNERAIKLTNKKYASRRTKHIAIKHHMVRDASDVEKVRVA
YADLLIKPLDMAKI
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