prot_H-paniculata_contig4250.10859.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4250.10859.1
Unique Nameprot_H-paniculata_contig4250.10859.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: D7FI94_ECTSI (Intrafragellar transpot 52, osm-6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI94_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 5.190e-45
Identity = 106/152 (69.74%), Postives = 110/152 (72.37%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGA------ADDAGAVSANEGG-GGLTFVYPYGATMTVQSP 145
            +L SGGSA FLLGEGGE+RLGTNVNYLLEEYGMTVHKDSVAR TYHKYMHPKEAFISHGILNPEI RMKD ASLSRRG     XXXXXXXXXX                            DDAGAV + + G GGLTFVYPYGATMTVQSP
Sbjct:   81 YLRSGGSAVFLLGEGGEERLGTNVNYLLEEYGMTVHKDSVARATYHKYMHPKEAFISHGILNPEIARMKDAASLSRRGGHSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDAGAVPSGDAGHGGLTFVYPYGATMTVQSP 232          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A836CAI6_9STRA (Intrafragellar transport 52, osm-6-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.170e-31
Identity = 69/145 (47.59%), Postives = 87/145 (60.00%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            +LN GGS A LL EGGE  LGTNVNYLLEE+G+ VH DSV RT ++KY+HPKE F+SHG+LNPE+ RMK+  ++  +G                             R +S G + D  A     GGG L FVYPYGA++TVQ+P
Sbjct:   71 YLNGGGSVAVLLAEGGEGHLGTNVNYLLEEFGVAVHADSVVRTAFYKYLHPKEVFVSHGVLNPELARMKNRCAVGTKG-----------------------------RTRSAGQSRDLDADDVANGGG-LAFVYPYGASLTVQAP 185          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A7S3XU22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU22_HETAK)

HSP 1 Score: 113 bits (283), Expect = 1.450e-29
Identity = 66/140 (47.14%), Postives = 83/140 (59.29%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATM 140
            +LN GGS A  LGEGGE + GTN+NYLLE++GMT+H DSV RTTY+KY+HPKE FIS+GILNPEI + K T   + R                  L                GAA +   V  ++GGG L+FV+PYGA+M
Sbjct:   15 YLNQGGSVAIFLGEGGEAKSGTNINYLLEQFGMTIHSDSVVRTTYYKYLHPKEVFISNGILNPEIAKKKHTMGAAGRKLGAFARKVAIGQQGLAGL---------------VGAAHEQ--VDTSDGGG-LSFVFPYGASM 136          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A7S2WK73_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WK73_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.070e-25
Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            +L+ GGS  FLLGEGGE++ GTN+N+LLEEYG++ + DSVART Y+KY+HPKE  I +GILN  +V      S  ++G                        P+ ++  K    A  AGA   N   GGL FVYPYG+T+ VQ P
Sbjct:   83 YLHDGGSILFLLGEGGEEKYGTNINFLLEEYGISFNNDSVARTVYYKYLHPKEVLIGNGILNRGVVTSSRHISGGKKGDLKGQDKRKK--------------PAILANKK----AVAAGATKEN---GGLDFVYPYGSTLNVQKP 206          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A812XMP2_9DINO (IFT52 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XMP2_9DINO)

HSP 1 Score: 95.1 bits (235), Expect = 1.640e-21
Identity = 56/145 (38.62%), Postives = 78/145 (53.79%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            +L  GGS  FL+GEGGE +  TNVNYLLEE+GM+++ D+V RT YHKY HPKE  I+HG +  ++VR  +      +                 +L  +I+              +DA  V+  +  GGL FV+PYGAT+  Q P
Sbjct:   70 YLADGGSILFLVGEGGEGKSNTNVNYLLEEFGMSINNDAVVRTVYHKYHHPKECLITHGTICRDLVRAANGEKKKEKENND-------------KLALNITK-------------EDAETVTLAKDDGGLEFVFPYGATLNAQKP 188          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A812JBT7_SYMPI (IFT52 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812JBT7_SYMPI)

HSP 1 Score: 95.9 bits (237), Expect = 5.480e-21
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            +L  GGS  FL+GEGGE +  TNVNYLLEE+GM+V+ D+V RT YHKY HPKE  I+HG +  ++VR  +      +                 +L  +I+              +DA  V+  +  GGL FV+PYGAT+  Q P
Sbjct:   70 YLADGGSVLFLVGEGGEGKSNTNVNYLLEEFGMSVNNDAVVRTVYHKYHHPKECLITHGTICRDLVRAANGEKKKEKENND-------------KLALNITK-------------EDAETVTLAKDDGGLEFVFPYGATLNAQKP 188          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A1Y2BQ39_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BQ39_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 6.370e-21
Identity = 62/145 (42.76%), Postives = 73/145 (50.34%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            FL  GGS  +L GEGGE    TN NYLLEEYGM V+ D V RT ++KY HPKE F+S+GILN EI R     +                             P + S  K  G     G    ++   GLTFVYPYGAT+TVQ P
Sbjct:   30 FLERGGSILYLSGEGGESEYNTNFNYLLEEYGMVVNPDCVTRTVFYKYFHPKEVFVSNGILNREINRAAGKKA-----------------------------PLTASA-KQGGIVGGGGDHHDHKNHTGLTFVYPYGATLTVQKP 144          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A812SV39_9DINO (Ift52 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SV39_9DINO)

HSP 1 Score: 96.7 bits (239), Expect = 1.130e-20
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            +L  GGS  FL+GEGGE +  TNVNYLLEE+GM+V+ D+V RT YHKY HPKE  I+HG +  ++VR  +      +                 +L  +I+              +DA  V+  +  GGL FV+PYGAT+  Q P
Sbjct:   87 YLADGGSVLFLVGEGGEGKSNTNVNYLLEEFGMSVNNDAVVRTVYHKYHHPKECLITHGTICRDLVRSANGEKKKEKENND-------------KLALNITK-------------EDAETVTLTKDDGGLEFVFPYGATLNAQKP 205          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: A0A507EUJ0_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507EUJ0_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 5.320e-20
Identity = 59/145 (40.69%), Postives = 73/145 (50.34%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            FL  GGS  +L GEGGE    TN NYLLEEYGM V+ DSV RT ++KY HPKE F+S+GILN EI R    A+  +                 G+ D                          ++   GL+FVYPYGA++TVQ P
Sbjct:  203 FLEKGGSILYLAGEGGESEYNTNFNYLLEEYGMMVNSDSVTRTVFYKYFHPKEVFVSNGILNREINR----AAGKKANVPASNRPGGMIGGDLGQHD--------------------------HKNHTGLSFVYPYGASLTVQKP 317          
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Match: F0Y809_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y809_AURAN)

HSP 1 Score: 94.7 bits (234), Expect = 5.770e-20
Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 0
Query:    1 FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMHPKEAFISHGILNPEIVRMKDTASLSRRGXXXXXXXXXXXXXXXGRLDSSISSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP 145
            F+ +GGS   L  EGGE +LG NVN LLE YGM+   DSV RT Y+KY+HPKE F+SHG+L PE+   K  +  + R                              RG    A +  G   A +GGG L+FVYP GAT++VQ P
Sbjct:   72 FVANGGSLLVLSSEGGEPKLGCNVNELLEGYGMSAQPDSVLRTVYYKYLHPKEVFVSHGVLQPELATHKHLSHGNARKHR---------------------------RGGVAAAKEPEGGHDAAQGGG-LSFVYPRGATLSVQRP 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4250.10859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI94_ECTSI5.190e-4569.74Intrafragellar transpot 52, osm-6-like protein n=1... [more]
A0A836CAI6_9STRA8.170e-3147.59Intrafragellar transport 52, osm-6-like protein (F... [more]
A0A7S3XU22_HETAK1.450e-2947.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2WK73_9STRA8.070e-2543.45Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A812XMP2_9DINO1.640e-2138.62IFT52 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A812JBT7_SYMPI5.480e-2139.31IFT52 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A1Y2BQ39_9FUNG6.370e-2142.76Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0A812SV39_9DINO1.130e-2039.31Ift52 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A507EUJ0_9FUNG5.320e-2040.69Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
F0Y809_AURAN5.770e-2041.38Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039975Intraflagellar transport protein 52 homologPANTHERPTHR12969NGD5/OSM-6/IFT52coord: 1..145
NoneNo IPR availablePANTHERPTHR12969:SF7INTRAFLAGELLAR TRANSPORT PROTEIN 52 HOMOLOGcoord: 1..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4250contigH-paniculata_contig4250:2499..3925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4250.10859.1mRNA_H-paniculata_contig4250.10859.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4250 2499..3925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4250.10859.1 ID=prot_H-paniculata_contig4250.10859.1|Name=mRNA_H-paniculata_contig4250.10859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
FLNSGGSAAFLLGEGGEDRLGTNVNYLLEEYGMTVHKDSVARTTYHKYMH
PKEAFISHGILNPEIVRMKDTASLSRRGGGGNSASSSSSRPGGGRLDSSI
SSPSSVSRGKSKGAADDAGAVSANEGGGGLTFVYPYGATMTVQSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039975IFT52