prot_H-paniculata_contig42393.10839.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42393.10839.1
Unique Nameprot_H-paniculata_contig42393.10839.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
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BLAST of mRNA_H-paniculata_contig42393.10839.1 vs. uniprot
Match: D8LUA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA4_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 9.090e-25
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0 
Query:    8 PIAGLRHLAGLRGLPSLVELTLDDVHFGTCPVVRSEGYRDFVMCFLRQVRRLDGLEVAEADREEAAVKY 76
            PI G+RHL+GLRGLPSL+ELTLDD+HFGTCPVV   GYR FV+  L QVRRLDGLEV EADR +   KY
Sbjct:  118 PIVGVRHLSGLRGLPSLMELTLDDIHFGTCPVVAKAGYRSFVLRCLSQVRRLDGLEVMEADRADVEHKY 186
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BLAST of mRNA_H-paniculata_contig42393.10839.1 vs. uniprot
Match: A0A7S1G818_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G818_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 9.810e-10
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:   24 LVELTLDDVHFGTCPVVRSEGYRDFVMCFLRQVRRLDGLEVAEADREEAA 73
            L  L+ DDVH+G+CPV+ ++GYRDFV+C LRQ+  LDG E  EAD   AA
Sbjct:  231 LRSLSFDDVHYGSCPVINADGYRDFVLCTLRQLTELDG-EPVEADDRRAA 279
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42393.10839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LUA4_ECTSI9.090e-2572.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1G818_9STRA9.810e-1058.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..76
e-value: 1.3E-9
score: 39.4
NoneNo IPR availablePANTHERPTHR46652FAMILY NOT NAMEDcoord: 1..73
NoneNo IPR availablePANTHERPTHR46652:SF4LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9coord: 1..73
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42393contigH-paniculata_contig42393:293..871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42393.10839.1mRNA_H-paniculata_contig42393.10839.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42393 293..871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42393.10839.1 ID=prot_H-paniculata_contig42393.10839.1|Name=mRNA_H-paniculata_contig42393.10839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
NLGLAGNPIAGLRHLAGLRGLPSLVELTLDDVHFGTCPVVRSEGYRDFVM
CFLRQVRRLDGLEVAEADREEAAVKY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf