prot_H-paniculata_contig4221.10816.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4221.10816.1
Unique Nameprot_H-paniculata_contig4221.10816.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1420
Homology
BLAST of mRNA_H-paniculata_contig4221.10816.1 vs. uniprot
Match: D8LKB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB6_ECTSI)

HSP 1 Score: 927 bits (2395), Expect = 5.160e-301
Identity = 689/1581 (43.58%), Postives = 864/1581 (54.65%), Query Frame = 0
Query:    1 MLNMCGLSSRMPEFAAKIDVYMLTLCSAIEDLARNEKEAVQVKLNHKRPGNLARLASAAVNLAGLQSAHSQLVKQKDMVAVLCLLSTHPRLTENVCRAHPLTEPSVTSWLASEGDSASGDGRLACLSAIGHLIRQQEDADAPLLRAGLMSSLHAILSDPL------------------SETLTYPSVGFGVSGAAGGG------VGAPMQAKQSILVGEGRVPSDGLGSARSTVA--GTAATLMSGTSRHMSLGGSAPHPRNRSREVVLCRSS---IEPILTVVAKICFCLTRRVKNRPRLVKDGLPALCAKVAKLTDDDGIRFMAVACVFSLTQSSELRPEIAKSGAADLALEALSAFEY---QGLEKSEYLLAQLAVVAQMARDPQFCRRLAAPEIIDLLTSIARLGTE------------DTDSYNESSDEE-----QETHVQEGCGEE-------GGRGGC------SPVLHPGRRKMRG---SGHKIKVACLYAATLRYCVVTIAESLGWSVYLSDGSSAGGRPSRMDIACMAANLVKIVCSVVLTSGPDETLMSKCALVMAGWSVDPTFVAEMSLRSDVGKSLSMLMRSVTPSTRVCASVALCNIAAAS----------HDQGRSLGDLPEAEASAIAMLELPRGSDGEESKTASIPECTSELAESKGSDGPT------------------EGAGCGIPTAVDVRKNKYKKS----CWLRSTDILPKIISGGLVRATGEVKGNLLRAMNNLMCSPRRRAEIVNGQQMANLFELVHGYTDEVRELAATMLYNLTCERSFHPALLDAGITYTLIDLLGASKFAPTR-ARAARAAHNSTSPAVAGVAVASSPDG------SAGTKTAVGKTAMGEAGENFGPDGAASSNTAMSP----------------------------------TVDTGNEGAGEGSRVKDEEMFDETGDDVAGTLVGKGGHKGIRNMASLCVRRSVLGALMNLTTATLSHPRLDPSAVMTLLTLVVQEDNAESPNEDMAGDLWVAWQTVVLQLSFLQRYRPLIVYHGDGQIFQHLKITNDPLLGKRSVMSATHQRIYRQLIMGTMVNITRDISLYDEFEGQVQVLREFLSEFEHEASGG--SGXXXXXXXXXXXXXXXXXXXXDXIG---TDDIVGADVFL------GEGMCSVGSSGVMEFRGGGAKDWVRHELCGQLVSNLFSSKTLRERLSKKPVAGILVGLLCGQPYR-ANRTPHTGQSVIPEGYEEPRPLLYGGGEEAAAIAARFVCEICVLYAAEGGFELPQRTFEALVKIAHHYNHAIWPTALVGATAINSGST-AVCASLESTTMNVS--GSSQSEFRAGHERKGGITDEKRGGGQQPGSPLRNATEGRNEGAITQE--------ILQQQRIXXXXXXXXXXXXXXXEGAGERPGSSAISNAGTDGSHGRLGDDGLKELGKNSKSNSRQQCSINSLCGSALETGKHALKLSSPRDQDDHGVIEDDGLEGENNKNGATANKLNIGFSGAVGGRQRQATALGARND---KVRREQTTLWTRAVGALCSPSHKDLWLPMIDAGILGAL 1417
            MLNMCGLSS +P  AAK+DVYMLTLCSA+EDLARNE EAVQVKLN KRPGNLA LASA+VNLA L+SAH+QLVKQKD+V VLCLLS  P+L ENV RAHP++E SVTSWLA E DSAS DGRLACLSAI HLIR QE+ D PLLRAGLM +LHAIL +P+                  SE    PS       AAG        V  P+ +        G+  ++   S RS VA  G     +        +  +    +NR R   L RSS   ++ IL VV K CF +T R +NRPRLV+ GLPALC KV KLT D+ I+FMA AC+FSL QS++L  +IA+SGAADLALE L+        G E+SE+LLAQLA+VAQ+A +P+FCRR+A+ ++IDLL ++A LG              D +  N+ S          T  +EG G         GG+GG       SP        M+G   SG ++KVA  Y   LRYCVV I E +G ++  +DG   G   S  ++  M   LV +VCS VLTSGPDE LM++CA VMA WS +  F  EM ++   GKSL++LMRSV+P T+   SVALCN+AAA+          +D G +  +L   +  A A+ E   G  G++         T++    + SDG +                  EG+G  +   +D  +           WL +T+IL   I+G L  AT +VK NL++AMNNLM S  RRA +V G +M  LFELVHGYT EVREL A ML+NLTCE  FHPALL+AG+T TL++LLG+S     + A   +      S A A +    +         SA   +  G  + G A  + G  GA S     S                                   T D   +GA   S          TG+ VA   +       +    SL VRR+VLGA+MNLT+ ++S PRLDPSAVM+LLTL++ ED  ESPNEDM  DLWV WQ VVL+LSF+++YR LIVYHGDGQIF HLK+TNDPL GK SVMS  H R Y++LIMGTMVNI+ + SLY+E EGQVQVLREFLSE+EHEASGG  S    XXXXXXXXXXXXXXXXX X+G   +D +  AD         G GM                +DWVRHELC +LVSNLFSSKTLRERLSKKP+AGILVGLLCG P R  NRT ++G S    G  EPRPLLYGGGEEAAAI +RF+CE+C+LY+ EGGF+LPQRTF+ALVKIAH+YN+             N+ ST A  AS +S    +   G S  E   G      + +++  G     SP     + ++  A+  E        +     +                 + ERP  S  S+     +     +                               +  L+ S         V +D   EG    +                G  +Q +  GA  D   +  RE T LW RAVG LCSPSH +LW  MID GILGA+
Sbjct:  258 MLNMCGLSSTLPSLAAKLDVYMLTLCSAMEDLARNESEAVQVKLNLKRPGNLAYLASASVNLADLKSAHAQLVKQKDIVTVLCLLSEQPKLVENVSRAHPVSESSVTSWLALEADSASPDGRLACLSAIEHLIRNQEEVDTPLLRAGLMGTLHAILDEPIAAAEKATEQAQEAGILEASEPSLLPSASGSAIAAAGSATTRGSVVTPPIASSSDSTSAIGKSGAERPSSPRSGVAVTGGGGRGVEVLDAKKIVAMTQTSKKNRER---LLRSSPDVLDRILAVVTKTCFSMTLRGRNRPRLVQHGLPALCGKVMKLTKDENIKFMAAACIFSLAQSADLCSDIAESGAADLALEDLANGGQPGQNGQEESEFLLAQLAIVAQVAVEPRFCRRMASAKMIDLLMTLA-LGNAPDKKAEHGRPRPDAEGTNDGSGRSGGSGAPNTSGREGSGXGNTVIDGGGGKGGVRSDGIGSPRPQRSGWPMKGKRFSGERVKVATPYVGALRYCVVAIVERVG-TILNADGEY-GRASSPSEMTSMVKKLVYLVCSAVLTSGPDEALMARCARVMADWSSEAKFAKEMGVKEAAGKSLAVLMRSVSPKTKSYVSVALCNVAAATQCETQLPSPRNDGGAATPELASTQDKA-AVNEGGGGGHGKD---------TNDHGSQRQSDGGSSAQSLRSREPDNNHMVSHEGSGAAVSETIDNNEGSVAAGDGDRFWLTNTNILRDTIAGCLASATADVKSNLIKAMNNLMVSKERRATLVAGDEMPALFELVHGYTPEVRELVARMLWNLTCEHDFHPALLEAGVTCTLLELLGSSSINNAKKANKQQXXXXXDSNAAASIRGVGNXXXXXXXXVSATDASVSGTQSSGAALLDDGGVGAVSGGETESAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTADAVGQGATRRSSSS-------TGERVASARLEAVEAVSMGRKPSLEVRRNVLGAVMNLTSLSISDPRLDPSAVMSLLTLIMHEDPNESPNEDMVADLWVTWQAVVLRLSFVEKYRALIVYHGDGQIFSHLKLTNDPLSGKSSVMSMAHDRAYKRLIMGTMVNISCETSLYEELEGQVQVLREFLSEYEHEASGGAHSTGGTXXXXXXXXXXXXXXXXXXXMGLADSDGLESADSDERGFDEDGSGMXXXXXXXXXXXXXSRGRDWVRHELCAKLVSNLFSSKTLRERLSKKPIAGILVGLLCGPPTRWNNRTSNSGGST--SGCGEPRPLLYGGGEEAAAITSRFLCELCILYSTEGGFDLPQRTFDALVKIAHYYNY-------------NASSTPAAAASTQSHPWRIGEGGGSGGEVGGGLAASASVGEKQPQGMDSNTSPKAAGKDSKDSAAVMSERGLASNDNLADSLSMSPPTGTADHEENRRSPSSPERPHDSTRSSLEATAAPAPTEEXXXXXXXXXXXXXXXXXXXXXXXXTQQTTASQKTLQQS---------VGDDWYTEGAGRPHNPAYRH----------GNSKQGSEGGAGEDAWSRTAREITRLWVRAVGWLCSPSHSNLWPHMIDVGILGAI 1781          
BLAST of mRNA_H-paniculata_contig4221.10816.1 vs. uniprot
Match: A0A6H5JX20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX20_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 2.600e-101
Identity = 284/682 (41.64%), Postives = 343/682 (50.29%), Query Frame = 0
Query:  605 EGAGCGIPTAVDVRKNKYKKS----CWLRSTDILPKIISGGLVRATGEVKGNLLRAMNNLMCSPRRRAEIVNGQQMANLFELVHGYTDEVRELAATMLYNLTCERSFHPALLDAGITYTLIDLLGAS----------------------------------------KFAPTRARAARAAHNSTSPAVAGVAVASSPDGSAGTKTAVGKTAMGEAGENFGPDGAASSNTAMSPTVDTGNEGAGEGSRVKDEEMFDETGDDVAGTLVGKGGHKGIRNMASLCVRRSVLGALMNLTTATLSHPRLDPSAVMTLLTLVVQEDNAESPNEDMAGDLWVAWQTVVLQLSFLQRYRPLIVYHGDGQIFQHLKITNDPLLGKRSVMSATHQRIYRQLIMGTMVNITRDISLYDEFEGQVQVLREFLSEFEHEASGG--SGXXXXXXXXXXXXXXXXXXXXDXIGTDDIVGADVFLGEGMCSVGSSGVMEFRGGGAKDWVRHELCGQLVSNLFSSKTLRERLSKKPVAGILVGLLCGQPYR-ANRT-------------------------------------------------------------------------------PHTGQSVIPEGYEEPRPLLYGGGEEAAAIAARFVCEICVLYAAEGGFELPQRTFEALVKIAHHYN 1160
            EG+G  +   +D              WL +T+IL   I+G L  AT +VK NL++AMNNLM S  RRA++V G ++  LFELVHGYT EVREL A ML+NLTCE  FH ALL+AG+T TL++LLG+S                                          + T++ AA        P V+G    S+ DGS+G    VG    G  G   GP+ +         T D      GEGS  +       TG+ VA           I    SL VRR+VLGA+MNLT+ ++S PRLDPSAVM+LLT ++ ED    PNE   G+L                                   TNDPL GK SVMS  H R Y++LIMGTMVNI+ + SLY+E EGQVQVLREFLSE+EHEASGG  S       XXXXXXXXXXXXXX  +G  D         +G+ S  S        GG +DWVRHELC +LVSNLFSSKTLRERLSKKP+AGILVGLLCG P R  NRT                                                                               P      +PEG  EPRPLLYGGGEEAAAI +RF+CE+C+LY+ EGGF+LPQRTF+ALVKIAH+YN
Sbjct:    5 EGSGAAVSETIDSNGGSEAAGDGDRFWLTNTNILRDTIAGCLASATADVKSNLIKAMNNLMVSEERRAKLVAGDELPALFELVHGYTPEVRELVARMLWNLTCEHDFHSALLEAGVTCTLLELLGSSXXXXXXXXXXXXXXXXXDSNAAASIRGVGNGSGGASATDASVSGTQSGAALLDDGGVRP-VSGGETESAQDGSSGD---VGPATSGAGGVGSGPEASTXXXXXXXHTADA----VGEGSTRRSSSG---TGERVASARSEAVEAVSIGRKPSLEVRRNVLGAVMNLTSLSISDPRLDPSAVMSLLTFIMHED----PNE--RGEL-----------------------------------TNDPLSGKSSVMSMAHDRAYKRLIMGTMVNISCETSLYEELEGQVQVLREFLSEYEHEASGGAHSTGGTLGGXXXXXXXXXXXXXXXGLGLAD--------SDGLESADSDERGLDEDGGGRDWVRHELCAKLVSNLFSSKTLRERLSKKPIAGILVGLLCGPPTRWNNRTSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKCEGEPPXPNPPLPEGCGEPRPLLYGGGEEAAAITSRFLCELCILYSTEGGFDLPQRTFDALVKIAHYYN 626          
BLAST of mRNA_H-paniculata_contig4221.10816.1 vs. uniprot
Match: A0A835YT04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT04_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 8.520e-15
Identity = 88/208 (42.31%), Postives = 113/208 (54.33%), Query Frame = 0
Query:  887 DMAGDLWVAWQTVVLQLSFLQRYRPLIVYHGDGQIFQHLKI--TNDPLLGKRSVMSATHQRIYRQLIMGTMVNITRDISLYDEFEGQVQVLREFLSEFEHEASGGSGXXXXXXXXXXXXXXXXXXXXDXIGTDDIVGADVFLGEGMCSVGSSGVMEFRGGGAKDWVRHELCGQLVSNLFSSKTLRERLSKKPVAGILVGLLCGQPYRA 1092
            D   DL   W   VL LS    YRPLIV HG+G IF  +K   T+DPLLG    ++ T +R +R+L M  + N++ D  L++E EGQ+ +LREFLSE++  A      XXXXXXXXXXXXXXXXXXX X                        + + RG       RH LC Q+++NL  S   RERL+++PV   L  LLC    RA
Sbjct:  602 DDGSDLDTMWLAAVLGLSRSAAYRPLIVRHGEGIIFGRIKALSTHDPLLGGGDTLNVTLERRHRELSMAILSNLSCDGELHEELEGQLPLLREFLSEYDAVAX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQLPDPRGD-----PRHLLCAQVIANLLRSAPFRERLARRPVGSALTELLCLDERRA 799          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4221.10816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKB6_ECTSI5.160e-30143.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JX20_9PHAE2.600e-10141.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YT04_9STRA8.520e-1542.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 470..747
e-value: 5.2E-8
score: 33.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 122..739

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4221contigH-paniculata_contig4221:893..12759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4221.10816.1mRNA_H-paniculata_contig4221.10816.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4221 893..12780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4221.10816.1 ID=prot_H-paniculata_contig4221.10816.1|Name=mRNA_H-paniculata_contig4221.10816.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1420bp
MLNMCGLSSRMPEFAAKIDVYMLTLCSAIEDLARNEKEAVQVKLNHKRPG
NLARLASAAVNLAGLQSAHSQLVKQKDMVAVLCLLSTHPRLTENVCRAHP
LTEPSVTSWLASEGDSASGDGRLACLSAIGHLIRQQEDADAPLLRAGLMS
SLHAILSDPLSETLTYPSVGFGVSGAAGGGVGAPMQAKQSILVGEGRVPS
DGLGSARSTVAGTAATLMSGTSRHMSLGGSAPHPRNRSREVVLCRSSIEP
ILTVVAKICFCLTRRVKNRPRLVKDGLPALCAKVAKLTDDDGIRFMAVAC
VFSLTQSSELRPEIAKSGAADLALEALSAFEYQGLEKSEYLLAQLAVVAQ
MARDPQFCRRLAAPEIIDLLTSIARLGTEDTDSYNESSDEEQETHVQEGC
GEEGGRGGCSPVLHPGRRKMRGSGHKIKVACLYAATLRYCVVTIAESLGW
SVYLSDGSSAGGRPSRMDIACMAANLVKIVCSVVLTSGPDETLMSKCALV
MAGWSVDPTFVAEMSLRSDVGKSLSMLMRSVTPSTRVCASVALCNIAAAS
HDQGRSLGDLPEAEASAIAMLELPRGSDGEESKTASIPECTSELAESKGS
DGPTEGAGCGIPTAVDVRKNKYKKSCWLRSTDILPKIISGGLVRATGEVK
GNLLRAMNNLMCSPRRRAEIVNGQQMANLFELVHGYTDEVRELAATMLYN
LTCERSFHPALLDAGITYTLIDLLGASKFAPTRARAARAAHNSTSPAVAG
VAVASSPDGSAGTKTAVGKTAMGEAGENFGPDGAASSNTAMSPTVDTGNE
GAGEGSRVKDEEMFDETGDDVAGTLVGKGGHKGIRNMASLCVRRSVLGAL
MNLTTATLSHPRLDPSAVMTLLTLVVQEDNAESPNEDMAGDLWVAWQTVV
LQLSFLQRYRPLIVYHGDGQIFQHLKITNDPLLGKRSVMSATHQRIYRQL
IMGTMVNITRDISLYDEFEGQVQVLREFLSEFEHEASGGSGVGIGGRDGG
GGGGGGGVGVGDGIGTDDIVGADVFLGEGMCSVGSSGVMEFRGGGAKDWV
RHELCGQLVSNLFSSKTLRERLSKKPVAGILVGLLCGQPYRANRTPHTGQ
SVIPEGYEEPRPLLYGGGEEAAAIAARFVCEICVLYAAEGGFELPQRTFE
ALVKIAHHYNHAIWPTALVGATAINSGSTAVCASLESTTMNVSGSSQSEF
RAGHERKGGITDEKRGGGQQPGSPLRNATEGRNEGAITQEILQQQRITTP
SSSTPPFGGDDEEGAGERPGSSAISNAGTDGSHGRLGDDGLKELGKNSKS
NSRQQCSINSLCGSALETGKHALKLSSPRDQDDHGVIEDDGLEGENNKNG
ATANKLNIGFSGAVGGRQRQATALGARNDKVRREQTTLWTRAVGALCSPS
HKDLWLPMIDAGILGALYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold