prot_H-paniculata_contig42106.10792.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42106.10792.1
Unique Nameprot_H-paniculata_contig42106.10792.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: UPI00092FCD17 (uncharacterized protein LOC109338179 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092FCD17)

HSP 1 Score: 56.6 bits (135), Expect = 3.340e-8
Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    1 MQGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKMI 74
            M+ +  N VWT VE  K+   +    +Y + IGEDGKVE YK RLVA G  Q  GI + E  SP   VA  K+I
Sbjct:   73 MESMKTNKVWTLVEASKDIKPIVCKWVYNKNIGEDGKVETYKARLVAKGYCQKGGIDYDETYSP---VAMMKLI 143          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 58.2 bits (139), Expect = 4.060e-8
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    1 MQGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSP 64
            ++ L DNG W+ V+   N   V    +Y+ K+  DGKVE+YK RLVA G  QI G  +QE  SP
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSP 243          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: UPI00090104FD (uncharacterized protein LOC104779870 isoform X1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00090104FD)

HSP 1 Score: 57.4 bits (137), Expect = 7.540e-8
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    4 LIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKMIV 75
            LI  G W  V R KN  ++ +M LY+ K   +G++ +YK RLVA+GN Q+ G+   E  SP    A+ + ++
Sbjct:  431 LIKMGTWCLVPRPKNTNIIRSMWLYKHKFDSNGRLSRYKARLVANGNSQLPGVDCDETFSPVVKPATIRAVL 502          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 57.0 bits (136), Expect = 1.020e-7
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    1 MQGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKM 73
            ++ L DNG W+ V+   N   V    +Y+ K+  DGKVE+YK RLVA G  QI G  +Q+  SP     + +M
Sbjct:    5 LKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRM 77          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: A0A2I0HGX5_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0HGX5_PUNGR)

HSP 1 Score: 53.1 bits (126), Expect = 1.160e-7
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    6 DNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSP 64
            +N VW  V+  +  +++   ++++RKIG DGKVE YK RLVA G RQ   + ++E  SP
Sbjct:   10 ENQVWDLVDLPEGIVLIGNELVFKRKIGADGKVETYKARLVAKGYRQRQEVDYEETFSP 68          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: A0A1X7TFD5_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFD5_AMPQE)

HSP 1 Score: 52.8 bits (125), Expect = 3.070e-7
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    2 QGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQ 52
            + L +N VW  VE  K++ VV +  +++RKIGE+GKVE+YK RLVA G  Q
Sbjct:    6 ESLEENQVWDLVELPKDRRVVGSKWVFKRKIGENGKVERYKARLVAQGYSQ 56          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 55.5 bits (132), Expect = 3.710e-7
Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    1 MQGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKMIV 75
            M  L +N  W  V+  K K VV    ++  K+G DGK+++YK RLVA G  Q  GI ++E  +P   + S ++++
Sbjct:  872 MAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILI 946          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 55.5 bits (132), Expect = 3.720e-7
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    9 VWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKMIV 75
            ++ +VER +N+ VV    ++R K G DGK++KYK RLVA G  Q+ G+ + +  +P    AS +M++
Sbjct:  995 LYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLL 1061          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: UPI000B5D1DA9 (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI000B5D1DA9)

HSP 1 Score: 52.8 bits (125), Expect = 4.520e-7
Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 0
Query:    1 MQGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKMIV 75
            +  L  NG W   +  K K  + +  +Y+ K   +GKV++YK RLVA G  QI G+ F++  SP   V + ++ +
Sbjct:    5 LSALEKNGTWILTDLPKEKKAIGSKWVYKVKTKPNGKVDRYKARLVAKGYNQIEGLDFKDQFSPVAKVVTIRIFI 79          
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Match: A0A2I0JPZ3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JPZ3_PUNGR)

HSP 1 Score: 54.7 bits (130), Expect = 5.620e-7
Identity = 26/70 (37.14%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    6 DNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGNRQITGIHFQEASSPAPAVASTKMIV 75
            ++ VW  V+  +  + +    +++RKIG DGKVE YK RLVA GNRQ   ++++E  SP   + S ++++
Sbjct:  124 ESQVWDLVDPPEGIIPIRNKWVFKRKIGADGKVETYKARLVAKGNRQRQEVNYKETFSPVAMLKSIRIML 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42106.10792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00092FCD173.340e-845.95uncharacterized protein LOC109338179 n=1 Tax=Lupin... [more]
A0A061F8M9_THECC4.060e-845.31Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00090104FD7.540e-837.50uncharacterized protein LOC104779870 isoform X1 n=... [more]
UPI00084940231.020e-739.73uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A2I0HGX5_PUNGR1.160e-742.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1X7TFD5_AMPQE3.070e-750.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T5R4_CAJCA3.710e-736.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI3.720e-738.81Integrase catalytic domain-containing protein n=1 ... [more]
UPI000B5D1DA94.520e-733.33uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A2I0JPZ3_PUNGR5.620e-737.14Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..73
e-value: 4.5E-9
score: 36.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42106contigH-paniculata_contig42106:579..803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42106.10792.1mRNA_H-paniculata_contig42106.10792.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42106 579..827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42106.10792.1 ID=prot_H-paniculata_contig42106.10792.1|Name=mRNA_H-paniculata_contig42106.10792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
MQGLIDNGVWTQVERRKNKLVVSTMMLYRRKIGEDGKVEKYKYRLVAHGN
RQITGIHFQEASSPAPAVASTKMIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2