prot_H-paniculata_contig4141.10648.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4141.10648.1
Unique Nameprot_H-paniculata_contig4141.10648.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
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BLAST of mRNA_H-paniculata_contig4141.10648.1 vs. uniprot
Match: D7G139_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G139_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.540e-39
Identity = 73/105 (69.52%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:   17 RPTLHRHASNSSIGSIGSLSRGMSELSFGSYAPANMTDDEQDLRDTWFPKARDCTCCKGFVYGCTSDICESMGQCTCSIEESDLKGGDSIWSSANGMDDLPSSPH 121
            RP L+R  SN+S  S+   +RGMSELSFGSY PAN TDDEQDLRDTWFPKARDCTCCKGFVYGCT+DIC+SMGQCTCSIEE+DL G   + S+ +  D    SPH
Sbjct:  146 RPALNRGTSNNSAVSV---TRGMSELSFGSYPPANATDDEQDLRDTWFPKARDCTCCKGFVYGCTADICDSMGQCTCSIEEADLDGSSDVASNISRTD----SPH 243
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BLAST of mRNA_H-paniculata_contig4141.10648.1 vs. uniprot
Match: A0A836CHD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.700e-17
Identity = 30/48 (62.50%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:   54 DDEQDLRDTWFPKARDCTCCKGFVYGCTSDICESMGQCTCSIEESDLK 101
            + +Q+L DTWFP++RDCTCC+GFVYGC  DIC ++G+CTC++EESD++
Sbjct:  139 EQDQELADTWFPRSRDCTCCRGFVYGCAGDICAALGKCTCAVEESDME 186
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BLAST of mRNA_H-paniculata_contig4141.10648.1 vs. uniprot
Match: A0A7S0MWD6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWD6_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 1.900e-7
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   57 QDLRDTWFPKARDCTCCKGFVYGCTSDICESMGQCTCS 94
            Q  ++TW+  AR+CTCCKGFVYGCT+  C +  +CTCS
Sbjct:  147 QIKKETWYANARNCTCCKGFVYGCTTPACAAQEECTCS 184
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4141.10648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G139_ECTSI1.540e-3969.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHD1_9STRA2.700e-1762.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0MWD6_9CHLO1.900e-757.89Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4141contigH-paniculata_contig4141:6075..13699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4141.10648.1mRNA_H-paniculata_contig4141.10648.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4141 6075..13699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4141.10648.1 ID=prot_H-paniculata_contig4141.10648.1|Name=mRNA_H-paniculata_contig4141.10648.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
GGGGGAGGAGLGVGGARPTLHRHASNSSIGSIGSLSRGMSELSFGSYAPA
NMTDDEQDLRDTWFPKARDCTCCKGFVYGCTSDICESMGQCTCSIEESDL
KGGDSIWSSANGMDDLPSSPHTSGHNGGGKHPPQPPTEAALAAASPRALS
TAPPVAAGGGAG
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