prot_H-paniculata_contig41302.10627.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig41302.10627.1
Unique Name	prot_H-paniculata_contig41302.10627.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	110

Homology

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8F0JYE6_9PHAE (Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE6_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.150e-59
Identity = 91/109 (83.49%), Postives = 99/109 (90.83%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKNLYLSLFITCL +TNFSTSASAVDI NGE+IF ANCSACH+GGNN IMP+KTL+K+ALS N MN+ SAITYQVTNGKNAMPAFGGRL D DI DVANFVLS+SEKGW
Sbjct:    1 MKNLYLSLFITCLAVTNFSTSASAVDINNGENIFTANCSACHAGGNNAIMPDKTLKKDALSGNQMNSVSAITYQVTNGKNAMPAFGGRLGDTDIEDVANFVLSQSEKGW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A6B7EVB8_9PHAE (Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A6B7EVB8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.510e-52
Identity = 80/109 (73.39%), Postives = 93/109 (85.32%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN +L  FI+CL + +F   A AVDI NGES+F ANCSACH+GGNNVIMPEKTL+K+AL  N MN+ +AITYQVTNGKNAMPAFGGRL++EDI DVANFVLS+SEKGW
Sbjct:    1 MKNFFLGFFISCLAMISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVNAITYQVTNGKNAMPAFGGRLSEEDIQDVANFVLSQSEKGW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A6G6D7E1_ECTSI (Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7E1_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.560e-52
Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN +L  FI+CL + +F  SA AVDI NGES+F ANCSACH+GGNNVIMPEKTLRKEAL  NNMN+ +AITYQVTNGKNAMPAFGGRL++ DI DVANFVLS++E GW
Sbjct:    1 MKNFFLGFFISCLALISFYNSAEAVDINNGESVFVANCSACHAGGNNVIMPEKTLRKEALGANNMNSVNAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSKAEGGW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8E5XRM0_9PHAE (Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRM0_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.280e-51
Identity = 82/109 (75.23%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN   +L I CL I +FST    VDI NGES+F ANCSACH+GGNNVIMPEKTL+K+ALS N MNT SAITYQVTNGKNAMPAFGGRL D DI DVANFVLS+SEK W
Sbjct:    1 MKNFLFTLLIGCLMIISFSTPTQGVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALSTNQMNTVSAITYQVTNGKNAMPAFGGRLADTDIEDVANFVLSQSEKDW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A0S0GBE4_COSCS (Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 RepID=A0A0S0GBE4_COSCS)

HSP 1 Score: 164 bits (416), Expect = 1.050e-50
Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN +   FI CL + +F   A AVDI NGE++F ANCSACH+GGNNVIMPEKTL+KEALS+N M++ SAITYQVTNGKNAMPAFGGRL + DI DVANFVLS+S+K W
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAVDINNGENVFTANCSACHAGGNNVIMPEKTLKKEALSQNKMDSVSAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSQSDKNW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A5A4MJ73_9PHAE (Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJ73_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.120e-50
Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN +L  FI+CLT+ +F   A AVDI NGES+F ANCSACH+GGNNVIMPEKTL+K AL EN M +  AITYQVTNGKNAMPAFGGRL++ DI DVANFVLS+S+K W
Sbjct:    1 MKNFFLGFFISCLTLISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKGALEENQMGSVKAITYQVTNGKNAMPAFGGRLSESDIEDVANFVLSQSDKDW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8F0JZT7_9PHAE (Cytochrome c6 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT7_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.290e-50
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN +   FI  LT+T+F T A AVD+ +GE+IF ANCSACH+GGNNVIMPEKTL+KEAL+ N MN+ +AITYQVTNGKNAMPAFGGRLTD DI+DVANFVL +S+  W
Sbjct:    1 MKNFFFGFFIASLTLTSFYTPAEAVDLTHGENIFTANCSACHAGGNNVIMPEKTLKKEALANNEMNSVNAITYQVTNGKNAMPAFGGRLTDADISDVANFVLGQSDSDW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8E8U4P1_9PHAE (Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8E8U4P1_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.740e-49
Identity = 74/109 (67.89%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MKN +   FI CL + +F   A A+DI NGE+IF ANCSACH+GGNNVIMPEKTL+K+AL++N MNT  AITYQVTNGKNAMPAFG RL + DI DVANFV+++S+KGW
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAIDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMNTIGAITYQVTNGKNAMPAFGSRLAETDIEDVANFVITQSDKGW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8F0F6Q3_AKKLU (Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6Q3_AKKLU)

HSP 1 Score: 160 bits (405), Expect = 5.000e-49
Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MK  +   FI CLT+ +    A AVDI NGE+IF ANCSACH+GGNNVIMPEKTL+K AL EN+MN+  AITYQVTNGKNAMPAFGGRL+++DI DVANFVL++S KGW
Sbjct:    1 MKKFFFGFFIACLTLISSHNPAQAVDINNGENIFTANCSACHAGGNNVIMPEKTLKKNALEENSMNSVGAITYQVTNGKNAMPAFGGRLSEDDIEDVANFVLAQSGKGW 109

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BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A2R4QPS7_9PHAE (Cytochrome c6 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS7_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 7.100e-49
Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 0

Query:    1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 109
            MK  +  LFI  LT+ +F TS  AVDI +GE++F ANCSACH+GGNNVIMPEKTL+K+ALS N M++ SAITYQVTNGKNAMPAFGGRL+D+DI DVA+FVLS+SEK W
Sbjct:    1 MKKFFFGLFIPYLTLISFYTSVQAVDINHGENVFTANCSACHAGGNNVIMPEKTLKKDALSTNQMDSVSAITYQVTNGKNAMPAFGGRLSDDDIEDVASFVLSQSEKDW 109

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0JYE6_9PHAE	2.150e-59	83.49	Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=28...	[more]
A0A6B7EVB8_9PHAE	1.510e-52	73.39	Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepI...	[more]
A0A6G6D7E1_ECTSI	1.560e-52	74.31	Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
A0A8E5XRM0_9PHAE	1.280e-51	75.23	Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772...	[more]
A0A0S0GBE4_COSCS	1.050e-50	70.64	Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 Rep...	[more]
A0A5A4MJ73_9PHAE	2.120e-50	71.56	Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 ...	[more]
A0A8F0JZT7_9PHAE	4.290e-50	70.64	Cytochrome c6 n=1 Tax=Desmarestia aculeata TaxID=6...	[more]
A0A8E8U4P1_9PHAE	1.740e-49	67.89	Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8...	[more]
A0A8F0F6Q3_AKKLU	5.000e-49	69.72	Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=...	[more]
A0A2R4QPS7_9PHAE	7.100e-49	70.64	Cytochrome c6 n=3 Tax=Fucaceae TaxID=3010 RepID=A0...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008168	Cytochrome c, class IC	PRINTS	PR00605	CYTCHROMECIC	coord: 79..101 score: 49.57 coord: 36..47 score: 53.5
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 25..109 e-value: 6.0E-35 score: 121.6
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 3..109
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 26..101 e-value: 5.1E-17 score: 62.0
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 25..105 score: 14.351
None	No IPR available	PANTHER	PTHR34688	FAMILY NOT NAMED	coord: 8..109
None	No IPR available	PANTHER	PTHR34688:SF2	CYTOCHROME C6, CHLOROPLASTIC	coord: 8..109
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..109
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.738
IPR023655	Cytochrome c6	HAMAP	MF_00594	Cytc_PetJ	coord: 25..109 score: 27.858

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig41302	contig	H-paniculata_contig41302:772..1101 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig41302.10627.1	mRNA_H-paniculata_contig41302.10627.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig41302 772..1101 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig41302.10627.1 ID=prot_H-paniculata_contig41302.10627.1|Name=mRNA_H-paniculata_contig41302.10627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIM
PEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANF
VLSRSEKGW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008168	Cyt_C_IC
IPR036909	Cyt_c-like_dom_sf
IPR009056	Cyt_c-like_dom
IPR023655	Cyt_C6