mRNA_H-paniculata_contig41302.10627.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8F0JYE6_9PHAE (Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE6_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.150e-59 Identity = 91/109 (83.49%), Postives = 99/109 (90.83%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKNLYLSLFITCL +TNFSTSASAVDI NGE+IF ANCSACH+GGNN IMP+KTL+K+ALS N MN+ SAITYQVTNGKNAMPAFGGRL D DI DVANFVLS+SEKGW
Sbjct: 1 MKNLYLSLFITCLAVTNFSTSASAVDINNGENIFTANCSACHAGGNNAIMPDKTLKKDALSGNQMNSVSAITYQVTNGKNAMPAFGGRLGDTDIEDVANFVLSQSEKGW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A6B7EVB8_9PHAE (Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A6B7EVB8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.510e-52 Identity = 80/109 (73.39%), Postives = 93/109 (85.32%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN +L FI+CL + +F A AVDI NGES+F ANCSACH+GGNNVIMPEKTL+K+AL N MN+ +AITYQVTNGKNAMPAFGGRL++EDI DVANFVLS+SEKGW
Sbjct: 1 MKNFFLGFFISCLAMISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVNAITYQVTNGKNAMPAFGGRLSEEDIQDVANFVLSQSEKGW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A6G6D7E1_ECTSI (Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7E1_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.560e-52 Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN +L FI+CL + +F SA AVDI NGES+F ANCSACH+GGNNVIMPEKTLRKEAL NNMN+ +AITYQVTNGKNAMPAFGGRL++ DI DVANFVLS++E GW
Sbjct: 1 MKNFFLGFFISCLALISFYNSAEAVDINNGESVFVANCSACHAGGNNVIMPEKTLRKEALGANNMNSVNAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSKAEGGW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8E5XRM0_9PHAE (Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRM0_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.280e-51 Identity = 82/109 (75.23%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN +L I CL I +FST VDI NGES+F ANCSACH+GGNNVIMPEKTL+K+ALS N MNT SAITYQVTNGKNAMPAFGGRL D DI DVANFVLS+SEK W
Sbjct: 1 MKNFLFTLLIGCLMIISFSTPTQGVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALSTNQMNTVSAITYQVTNGKNAMPAFGGRLADTDIEDVANFVLSQSEKDW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A0S0GBE4_COSCS (Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 RepID=A0A0S0GBE4_COSCS) HSP 1 Score: 164 bits (416), Expect = 1.050e-50 Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN + FI CL + +F A AVDI NGE++F ANCSACH+GGNNVIMPEKTL+KEALS+N M++ SAITYQVTNGKNAMPAFGGRL + DI DVANFVLS+S+K W
Sbjct: 1 MKNFFFGFFIACLALISFQNPAQAVDINNGENVFTANCSACHAGGNNVIMPEKTLKKEALSQNKMDSVSAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSQSDKNW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A5A4MJ73_9PHAE (Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJ73_9PHAE) HSP 1 Score: 164 bits (414), Expect = 2.120e-50 Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN +L FI+CLT+ +F A AVDI NGES+F ANCSACH+GGNNVIMPEKTL+K AL EN M + AITYQVTNGKNAMPAFGGRL++ DI DVANFVLS+S+K W
Sbjct: 1 MKNFFLGFFISCLTLISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKGALEENQMGSVKAITYQVTNGKNAMPAFGGRLSESDIEDVANFVLSQSDKDW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8F0JZT7_9PHAE (Cytochrome c6 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT7_9PHAE) HSP 1 Score: 163 bits (412), Expect = 4.290e-50 Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN + FI LT+T+F T A AVD+ +GE+IF ANCSACH+GGNNVIMPEKTL+KEAL+ N MN+ +AITYQVTNGKNAMPAFGGRLTD DI+DVANFVL +S+ W
Sbjct: 1 MKNFFFGFFIASLTLTSFYTPAEAVDLTHGENIFTANCSACHAGGNNVIMPEKTLKKEALANNEMNSVNAITYQVTNGKNAMPAFGGRLTDADISDVANFVLGQSDSDW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8E8U4P1_9PHAE (Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8E8U4P1_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.740e-49 Identity = 74/109 (67.89%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MKN + FI CL + +F A A+DI NGE+IF ANCSACH+GGNNVIMPEKTL+K+AL++N MNT AITYQVTNGKNAMPAFG RL + DI DVANFV+++S+KGW
Sbjct: 1 MKNFFFGFFIACLALISFQNPAQAIDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMNTIGAITYQVTNGKNAMPAFGSRLAETDIEDVANFVITQSDKGW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A8F0F6Q3_AKKLU (Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6Q3_AKKLU) HSP 1 Score: 160 bits (405), Expect = 5.000e-49 Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MK + FI CLT+ + A AVDI NGE+IF ANCSACH+GGNNVIMPEKTL+K AL EN+MN+ AITYQVTNGKNAMPAFGGRL+++DI DVANFVL++S KGW
Sbjct: 1 MKKFFFGFFIACLTLISSHNPAQAVDINNGENIFTANCSACHAGGNNVIMPEKTLKKNALEENSMNSVGAITYQVTNGKNAMPAFGGRLSEDDIEDVANFVLAQSGKGW 109
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Match: A0A2R4QPS7_9PHAE (Cytochrome c6 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS7_9PHAE) HSP 1 Score: 160 bits (404), Expect = 7.100e-49 Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 1
Query: 1 MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMPEKTLRKEALSENNMNTASAITYQVTNGKNAMPAFGGRLTDEDIADVANFVLSRSEKGW 327
MK + LFI LT+ +F TS AVDI +GE++F ANCSACH+GGNNVIMPEKTL+K+ALS N M++ SAITYQVTNGKNAMPAFGGRL+D+DI DVA+FVLS+SEK W
Sbjct: 1 MKKFFFGLFIPYLTLISFYTSVQAVDINHGENVFTANCSACHAGGNNVIMPEKTLKKDALSTNQMDSVSAITYQVTNGKNAMPAFGGRLSDDDIEDVASFVLSQSEKDW 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41302.10627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig41302.10627.1 >prot_H-paniculata_contig41302.10627.1 ID=prot_H-paniculata_contig41302.10627.1|Name=mRNA_H-paniculata_contig41302.10627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp MKNLYLSLFITCLTITNFSTSASAVDIMNGESIFNANCSACHSGGNNVIMback to top mRNA from alignment at H-paniculata_contig41302:772..1101- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig41302.10627.1 ID=mRNA_H-paniculata_contig41302.10627.1|Name=mRNA_H-paniculata_contig41302.10627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=330bp|location=Sequence derived from alignment at H-paniculata_contig41302:772..1101- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig41302:772..1101- >mRNA_H-paniculata_contig41302.10627.1 ID=mRNA_H-paniculata_contig41302.10627.1|Name=mRNA_H-paniculata_contig41302.10627.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig41302:772..1101- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |