prot_H-paniculata_contig41294.10625.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41294.10625.1
Unique Nameprot_H-paniculata_contig41294.10625.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER)

HSP 1 Score: 78.2 bits (191), Expect = 5.570e-15
Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEGNV--KDSAPERKTTSNSTEYRGMVGSLMYASIGT 85
            +KDLG    +LG+E +RD++ GTI+ISQ  YI EV+KRYG + C+ V TP+E  +  ++S  +R+       Y+ ++GSLMY   GT
Sbjct: 1053 LKDLGEPKYILGLEVKRDKTQGTISISQKKYIGEVLKRYGMENCKPVSTPIEPGLTQEESTSQREEQLQGIPYQSLIGSLMYLVQGT 1139          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A7M5XDS1_9CNID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XDS1_9CNID)

HSP 1 Score: 75.5 bits (184), Expect = 6.810e-15
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEG--NVKDSAPERKTTSNSTEYRGMVGSLMYASIGT 85
            M D G ++ +LG+  RRDR  G I I Q +Y+R V++R+G DECR + TP+E   + +  AP+ K   N   Y+  +GSL+YASIGT
Sbjct:   84 MVDQGEINYILGMRVRRDRQAGIIRIDQSAYLRNVLQRFGMDECRPISTPMETGKSFEKLAPDEKPV-NLKSYQAAIGSLIYASIGT 169          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A6D2KZJ0_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KZJ0_9BRAS)

HSP 1 Score: 74.7 bits (182), Expect = 8.070e-14
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEGNVKDSAPERKTTSNSTE---YRGMVGSLMYASIGT 85
            MKD+G  SR+LGI+ RRDR  G + +SQ SY+ +VV+++   E + V TP+ G+ K SA    +    TE   Y  +VGS+MYA IGT
Sbjct:  127 MKDMGPASRILGIDIRRDREAGVLYLSQASYLEKVVQKFKMKEAKSVNTPMGGHFKLSAVTEDSECIDTEKYPYSSVVGSIMYAMIGT 214          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 73.6 bits (179), Expect = 2.230e-13
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPV--EGNVK-----DSAPERKTTSNSTEYRGMVGSLMYASIGT 85
            MKDLG   +++GIE  RDRS GT+T+SQ  YI  ++ RYGF +  GV TP+  + N K       AP    ++ + EY+ M+G LMYA+I T
Sbjct:  197 MKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARA-EYQSMIGGLMYAAICT 287          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A1M2W5L7_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W5L7_TRAPU)

HSP 1 Score: 70.1 bits (170), Expect = 2.690e-13
Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEGNVKDSA--PERKTT-------SNSTEYRGMVGSLMYASIGT 85
            M+DLG  S +LGI  RRDR    I +SQ  YI  V+ RYG  +C+   TP+  +VK SA  PE  TT        +S  Y  ++GS+MYA +GT
Sbjct:   14 MRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSANDPEDNTTLHSIMIDGHSVSYASVIGSMMYAMMGT 107          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A537R0H1_9PROT (DDE-type integrase/transposase/recombinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R0H1_9PROT)

HSP 1 Score: 71.6 bits (174), Expect = 1.100e-12
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTP-VEGNVKDSAPERKTTSNSTEYRGMVGSLMYASIGT 85
            MKDLG ++  LG+   RDR N TI ++Q +YI  V+KR G + C  V TP + G   ++    + + N  EY+ +VGSLMYA +GT
Sbjct:  596 MKDLGEINHYLGMHIIRDRRNQTIHVNQTAYINAVIKRAGMEGCNAVSTPMIPGRKLETRKGSEPSVNKHEYQHLVGSLMYAMLGT 681          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: Q18L98_CITSI (Putative gag-pol polyprotein n=2 Tax=Citrus sinensis TaxID=2711 RepID=Q18L98_CITSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.120e-12
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEGNVKDSAP---ERKTTSNSTEYRGMVGSLMYASIGT 85
            MKDLG+  R+LG++  RDRS GT+ +SQG YI++V++R+   +C+ V TP+    K SA    E ++  N   Y   VGSLMYA + T
Sbjct: 1039 MKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKPVQTPLGPQFKLSAATTSEDESQMNEFPYAQAVGSLMYAMVCT 1126          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 69.7 bits (169), Expect = 5.320e-12
Identity = 41/94 (43.62%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEGNVKDSA--PERKTT-------SNSTEYRGMVGSLMYASIGT 85
            M+DLG  S +LGI  RRDR    I +SQ  YI  V+ RYG  +C+   TP+  +VK SA  PE  TT         S  Y  ++GS+MYA +GT
Sbjct: 1205 MRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGT 1298          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 69.3 bits (168), Expect = 6.530e-12
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPV--EGNVK------DSAPERKTTSNSTEYRGMVGSLMYASIGT 85
            MKD+G   +++GIE  RDRS GT+T+SQ  YI  ++ RYGF     V TP+  + N K      D+ P   +     EY+ M+G LMYA+I T
Sbjct:  112 MKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVR--AEYQSMIGGLMYAAICT 202          
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Match: UPI001CA8A0DE (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA8A0DE)

HSP 1 Score: 69.3 bits (168), Expect = 6.720e-12
Identity = 31/87 (35.63%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTPVEGNVKDSAPERKTTSNSTEY--RGMVGSLMYASIGT 85
            MKDLG +S+ LG++  ++   G   +SQ  Y++EV+++YG  +C  V TP+E N+  ++ + +T +   +   R ++GS+MYA++GT
Sbjct:  168 MKDLGVISQYLGVDIEQNLDTGCTKVSQVEYLKEVIQKYGMQDCNAVDTPIEANIDLNSLKSETPNFEMQKICRKIIGSIMYAALGT 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41294.10625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A293MM55_ORNER5.570e-1543.68Reverse transcriptase, gag, polyprotein (Fragment)... [more]
A0A7M5XDS1_9CNID6.810e-1544.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2KZJ0_9BRAS8.070e-1445.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A146H3U8_MYCCL2.230e-1344.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2W5L7_TRAPU2.690e-1343.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A537R0H1_9PROT1.100e-1243.02DDE-type integrase/transposase/recombinase n=1 Tax... [more]
Q18L98_CITSI1.120e-1244.32Putative gag-pol polyprotein n=2 Tax=Citrus sinens... [more]
A0A1M2VT18_TRAPU5.320e-1243.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A146H7K8_MYCCL6.530e-1241.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001CA8A0DE6.720e-1235.63uncharacterized mitochondrial protein AtMg00810-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..51
e-value: 6.5E-7
score: 29.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41294contigH-paniculata_contig41294:44..354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41294.10625.1mRNA_H-paniculata_contig41294.10625.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41294 44..882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41294.10625.1 ID=prot_H-paniculata_contig41294.10625.1|Name=mRNA_H-paniculata_contig41294.10625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
MKDLGSLSRMLGIEARRDRSNGTITISQGSYIREVVKRYGFDECRGVPTP
VEGNVKDSAPERKTTSNSTEYRGMVGSLMYASIGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2