prot_H-paniculata_contig4123.10615.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4123.10615.1
Unique Nameprot_H-paniculata_contig4123.10615.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A6H5KJ10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ10_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 7.710e-95
Identity = 176/255 (69.02%), Postives = 193/255 (75.69%), Query Frame = 0
Query:    1 GSGG-GGDVVSKPAGRVPRKHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKR---PRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFFRVS 251
            GSGG G    +   GRVPRKHQEQRRGLPIFA+KA I+RAVK HQTVVVVGETGSGKSTQIPQFLYEAGI  GG GW            G  + +   +  GSGKKR   P       G +  G +K G +GG +IACTQPRRVAAVTV++RVAAE G        Y+VRFDD TS STR+KYMTDGVLLREAMSDPLLSAYSA+VLDEAHERSLDTDILFGL+RRLQPKRPDLKVVVMSATLDVDLF+RFFR S
Sbjct:  307 GSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKYHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWI----------PGWESGEATTAARGSGKKRGRAPSQEDVVKGSSSGGGDKRGFQGG-LIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPDLKVVVMSATLDVDLFRRFFRDS 550          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 2.350e-82
Identity = 169/259 (65.25%), Postives = 182/259 (70.27%), Query Frame = 0
Query:    1 GSGG-GGDVVSKPAGRVPRKHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKR---PRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLK-------------VVVMSATLDVD 242
            GSGG G    +   GRVPRKHQEQRRGLPIFA+KA I+RAVKDHQTVVVVGETGSGKSTQIPQFLYEAGI  GG GW    E        T AR       GSGKKR   P       G +  G +K G +GG +IACTQPRRVAAVTV++RVAAE G        Y+VRFDD TS STR+KYMTDGVLLREAMSDPLLSAYSA+VLDEAHERSLDTDILFGL+RRLQPKRPDLK             V VM AT D D
Sbjct:  307 GSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGE---SGEATTAAR-------GSGKKRGRAPSQEDVFKGSSSSGPDKRGFQGG-LIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPDLKDSVSLHVPGRTHPVDVMYATEDQD 554          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.830e-64
Identity = 120/220 (54.55%), Postives = 150/220 (68.18%), Query Frame = 0
Query:   10 SKPAGRVPRKHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPD 229
            ++P+ R+PR+HQE RR LP+F ++  IV AVK H+TVV+VGETGSGKSTQIPQ+LY+AG+          ++H+G    GT++              PR                       I CTQPRRVAA+TV++RVA E GSELGH  GYSVRFDD TS STRVKY+TDGVLLREAM+DP+L +YS ++LDEAHERSL TDILFGL+R+LQ KRP+
Sbjct:   23 ARPSPRLPRQHQEVRRQLPVFQHRDNIVTAVKTHRTVVLVGETGSGKSTQIPQYLYDAGLA---------SKHKGSSGNGTLS--------------PR----------------------TICCTQPRRVAAITVAKRVAEEMGSELGHTCGYSVRFDDQTSPSTRVKYVTDGVLLREAMADPMLKSYSVLILDEAHERSLQTDILFGLVRKLQDKRPN 197          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: K8YVU8_NANGC (Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVU8_NANGC)

HSP 1 Score: 216 bits (550), Expect = 8.140e-62
Identity = 123/234 (52.56%), Postives = 147/234 (62.82%), Query Frame = 0
Query:   18 RKHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFFRVS 251
            R+HQ  R+ LPI+  K  +V  V+ H +VV+VGETGSGKSTQ+PQFL +AG C G V      E QG       AR                                     +IACTQPRRVAA+TV+ RVA E G  LG  VGY+VRFDD T   T +KYMTDGVLLREAM+DPLL+ Y+ ++LDEAHERSL TDILFGLIRR Q +R DL+VVVMSATLDV++F+RFF   
Sbjct:   23 RQHQNARQQLPIWRQKTYVVETVRRHASVVLVGETGSGKSTQVPQFLLDAGFCAGIV------EAQGSTPSPIRARK------------------------------------LIACTQPRRVAAITVAGRVAEEMGCALGQAVGYAVRFDDKTGPRTVIKYMTDGVLLREAMTDPLLTRYAVIILDEAHERSLQTDILFGLIRRAQREREDLRVVVMSATLDVEVFRRFFETG 214          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A7J7C7L0_TRIWF (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C7L0_TRIWF)

HSP 1 Score: 201 bits (510), Expect = 9.720e-58
Identity = 108/230 (46.96%), Postives = 143/230 (62.17%), Query Frame = 0
Query:   19 KHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFF 248
            KHQE+R+ LPI+AY+  +++AV DHQ +V+VGETGSGK+TQIPQ+L+EAG                  +RG VA                                         CTQPRRVAA++V+ RV+ E G +LGH VGYS+RF+DCTSD T +KYMTDG+LLRE +  P L++YS V++DEAHERSL TDILFGL++ +   RPDLK+++ SATLD + F  +F
Sbjct:   69 KHQEERKTLPIYAYRDELLQAVNDHQVIVIVGETGSGKTTQIPQYLHEAGYT----------------KRGKVA-----------------------------------------CTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLCQPDLASYSVVMVDEAHERSLSTDILFGLVKDVARSRPDLKLLISSATLDAEKFSAYF 241          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A7R9T4T2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T4T2_9CHLO)

HSP 1 Score: 193 bits (491), Expect = 1.990e-56
Identity = 102/230 (44.35%), Postives = 143/230 (62.17%), Query Frame = 0
Query:   19 KHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFF 248
            K +  R+ LPIF Y+ ++++AV+DHQ VV+VGETGSGK+TQIPQ+++EAG  G                                                   KT       I CTQPRRVAA++V+ RVA EAG +LGH VGY++RF+DCT+D TRVKYMTDG+LLRE + +P LS+Y+ +++DEAHER+L TD+LFGL++ +   RP++K+++ SATLD + F  +F
Sbjct:   20 KIEADRKSLPIFPYRESLIKAVEDHQVVVIVGETGSGKTTQIPQYMWEAGFGG---------------------------------------------------KTQK-----IGCTQPRRVAAMSVASRVAEEAGVKLGHEVGYTIRFEDCTNDKTRVKYMTDGMLLREFLGEPDLSSYAVMMVDEAHERTLHTDVLFGLVKDIARFRPEIKLLISSATLDAEKFSEYF 193          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A1Y5ICM3_OSTTA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5ICM3_OSTTA)

HSP 1 Score: 194 bits (492), Expect = 3.750e-55
Identity = 102/230 (44.35%), Postives = 142/230 (61.74%), Query Frame = 0
Query:   19 KHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFF 248
            K +  R+ LPIF Y+  +++AV+DHQ VV+VGETGSGK+TQIPQ+++EAG  G                                                   KT       I CTQPRRVAA++V+ RVA EAG +LGH VGYS+RF+DCT+D TR+KYMTDG+LLRE + +P LS+Y+ +++DEAHER+L TD+LFGL++ +   RP++K+++ SATLD + F  +F
Sbjct:  254 KIEADRKSLPIFPYRDGLIKAVEDHQVVVIVGETGSGKTTQIPQYMWEAGFAG---------------------------------------------------KTQK-----IGCTQPRRVAAMSVAARVAEEAGVKLGHEVGYSIRFEDCTNDKTRLKYMTDGMLLREFLGEPDLSSYAVMMVDEAHERTLHTDVLFGLVKDIARFRPEIKLLISSATLDAEKFSEYF 427          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A7E4ZXY9_PANRE (Uncharacterized protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4ZXY9_PANRE)

HSP 1 Score: 199 bits (507), Expect = 6.270e-55
Identity = 103/227 (45.37%), Postives = 142/227 (62.56%), Query Frame = 0
Query:   22 EQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFF 248
            E R+ LP+FA++   ++AVKDHQ +++ GETGSGK+TQ+PQ+LYEAG C               K+R                                           I CTQPRRVAA++V+ RVA E G++LG +VGYS+RF+DCTS+ T +KYMTDG+LLRE M++P L++YS +++DEAHER+L TDILFGL++ +   RPDLK+++ SATLD D F +FF
Sbjct:  392 ETRKSLPVFAFREEFIQAVKDHQVLIIEGETGSGKTTQLPQYLYEAGFCA-------------DKKR-------------------------------------------IGCTQPRRVAAMSVASRVAEEVGTKLGAVVGYSIRFEDCTSERTAIKYMTDGMLLREFMNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDADKFSKFF 562          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A7N1A962_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A962_KALFE)

HSP 1 Score: 194 bits (494), Expect = 7.900e-55
Identity = 108/243 (44.44%), Postives = 151/243 (62.14%), Query Frame = 0
Query:   11 KPAGRVPRKH-----QEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFF 248
            KP  +V +K      QE+RR LP+++YK ++++A++ +Q +V++GETGSGK+TQIPQ+L+EAG          TN                                                 G+IACTQPRRVAA++V+ RV+ E G +LGH VGYSVRF+DCTSD T VKYMTDG+LLRE +S+P LS+YS +++DEAHER++ TD+LFGL++ +   RP+LK++V+SATLD   F  FF
Sbjct:  176 KPPVKVSKKPSWKQLQEERRRLPVYSYKHSLLQAIEKYQIIVIMGETGSGKTTQIPQYLHEAGY---------TNR------------------------------------------------GIIACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSVRFEDCTSDKTVVKYMTDGMLLREFLSEPDLSSYSVLMIDEAHERTVSTDLLFGLVKDIARYRPELKLLVLSATLDTAKFSDFF 361          
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Match: A0A7S2K837_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K837_9STRA)

HSP 1 Score: 186 bits (471), Expect = 8.670e-55
Identity = 104/241 (43.15%), Postives = 142/241 (58.92%), Query Frame = 0
Query:    9 VSKPAGRVPRKHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPTGSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVAAEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSAVVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFFR 249
             ++P  +   +  EQR  LP++ +K +++  V  HQ  V+ GETGSGK+TQIPQFL EAG       +N +                                                   ++ACTQPRRVAA ++++RVA E   ELG  VGYSVRFD+ +SD+TR+K++TDG+LLREAM+DPL++ YS +VLDEAHER+L TD+L GL++ +  KR DLKVVVMSATLD + FQ +F 
Sbjct:   36 TNEPYSQKYHRILEQRLKLPVYKFKKSLIETVAKHQVTVIEGETGSGKTTQIPQFLVEAGYD-----FNNSK--------------------------------------------------LVACTQPRRVAATSIAQRVAEEMDCELGAEVGYSVRFDEMSSDATRLKFLTDGMLLREAMNDPLMARYSVIVLDEAHERTLATDVLMGLLQEVLLKRKDLKVVVMSATLDAEKFQTYFN 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4123.10615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ10_9PHAE7.710e-9569.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX9_ECTSI2.350e-8265.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD99_9STRA2.830e-6454.55P-loop containing nucleoside triphosphate hydrolas... [more]
K8YVU8_NANGC8.140e-6252.56Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=... [more]
A0A7J7C7L0_TRIWF9.720e-5846.96Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A7R9T4T2_9CHLO1.990e-5644.35Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A1Y5ICM3_OSTTA3.750e-5544.35P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7E4ZXY9_PANRE6.270e-5545.37Uncharacterized protein n=1 Tax=Panagrellus redivi... [more]
A0A7N1A962_KALFE7.900e-5544.44Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A7S2K837_9STRA8.670e-5543.15Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 25..251
e-value: 5.9E-23
score: 92.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 37..251
score: 19.041
NoneNo IPR availablePANTHERPTHR18934:SF99ATP-DEPENDENT RNA HELICASE DHX37-RELATEDcoord: 18..69
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 18..69
NoneNo IPR availablePANTHERPTHR18934:SF99ATP-DEPENDENT RNA HELICASE DHX37-RELATEDcoord: 116..245
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 116..245
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 199..208
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4123contigH-paniculata_contig4123:285..5578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4123.10615.1mRNA_H-paniculata_contig4123.10615.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4123 285..5578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4123.10615.1 ID=prot_H-paniculata_contig4123.10615.1|Name=mRNA_H-paniculata_contig4123.10615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
GSGGGGDVVSKPAGRVPRKHQEQRRGLPIFAYKAAIVRAVKDHQTVVVVG
ETGSGKSTQIPQFLYEAGICGGGVGWNGTNEHQGQKRRGTVARDGPISPT
GSGKKRPRHSYGGSGDAGIGKNKTGSRGGGVIACTQPRRVAAVTVSRRVA
AEAGSELGHIVGYSVRFDDCTSDSTRVKYMTDGVLLREAMSDPLLSAYSA
VVLDEAHERSLDTDILFGLIRRLQPKRPDLKVVVMSATLDVDLFQRFFRV
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase