|
|
Homology
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: D7G3V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V0_ECTSI) HSP 1 Score: 119 bits (298), Expect = 1.790e-26 Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 3
Query: 1683 SGDAYVGRTTLIEGAARTGG--WERNNTVEDFYEARLKEVVDVSQGLDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV 1997
SG+ TT GA GG WER+ ED YE LK +V VS G YWM PLM+LTKPE RK AMQL++ NKLGY S++GGPV KG+LL++VL QKEKHPTKV+
Sbjct: 137 SGEGGAAETT---GAWSGGGAGWERDEAGEDVYEENLKALVGVSTGPHGYWMGPLMALTKPETRKTAMQLTADNKLGYRSSKGGPVSKGTLLQYVLEQKEKHPTKVM 240
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A6H5K8V0_9PHAE (MutS_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V0_9PHAE) HSP 1 Score: 117 bits (292), Expect = 8.640e-24 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 3
Query: 1743 WERNNTVEDFYEARLKEVVDVSQGLDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV 1997
WER+ ED YE LK +V VS G YWM PLM+LTKPE RK AMQL++ NKLGY S++GGPV KG+LL++VL QKEKHPTKV+
Sbjct: 411 WERDEAEEDVYEENLKALVGVSTGPHDYWMGPLMALTKPETRKTAMQLTADNKLGYRSSKGGPVSKGTLLQYVLEQKEKHPTKVL 495
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A7S0DPS9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DPS9_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 5.620e-6 Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = 3
Query: 1782 RLKEVVDVSQGLDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGP-VGKGSLLEFVLAQKEKHPTKVV 1997
+++++ + G+D YW L+ LTKP A+ + L S NK G+ G P + KGSL+E+ +++KEKHP+K++
Sbjct: 235 KVQQITNQDHGVDGYWKPWLLRLTKPSAQNLVHTLVSDNKFGF--KHGMPKLKKGSLMEYAISEKEKHPSKII 305
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A482SEF4_9ARCH (MutS_I domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEF4_9ARCH) HSP 1 Score: 54.7 bits (130), Expect = 7.160e-5 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 3
Query: 1815 LDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV 1997
+D YW+ L + + AR + QL N LG+ S G P G+LL++V+ QK+KHPTKVV
Sbjct: 58 VDPYWINQLKQIDRANARALISQLVPDNPLGFDSGNG-PAKTGTLLDYVIQQKKKHPTKVV 117
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A328AC93_9CAUL (Endonuclease n=1 Tax=Phenylobacterium deserti TaxID=1914756 RepID=A0A328AC93_9CAUL) HSP 1 Score: 53.9 bits (128), Expect = 8.490e-5 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 3
Query: 483 GKWKARISSKGGLQQLGTFGCELDAARAYNKAARTLHGSAAKLNSLPEEA 632
G+W+A I G LGTFG ELDAA AY+KAAR LHG+ A+LN P+EA
Sbjct: 113 GRWQAVIVCDGRRHYLGTFGAELDAALAYDKAARELHGAFARLN-FPDEA 161
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | chloroplast |
| Exons | 4 |
| Model size | 1997 |
| Cds size | 1935 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4119.10606.1 >prot_H-paniculata_contig4119.10606.1 ID=prot_H-paniculata_contig4119.10606.1|Name=mRNA_H-paniculata_contig4119.10606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=645bp
MKRTLGSLWNFVVAIHCSHATRLAPPSLAFAFMPLVIGNGFVKKALFEPS TRHVLSRNSRQLSTLPLTSKPKRAHILQCMATSSSASSRGRRTRASPPAA GVQRGGRGSSRRSSSAPVSTSSARRSYVSSDYRGVVGGPKGKWKARISSK GGLQQLGTFGCELDAARAYNKAARTLHGSAAKLNSLPEEADAKTGTVQEV TAEALEEGGIVVTAKLGAGTRGKASKAKVGARASAAEAVTEHDVMSGNST SLAVAVMGEGMGSYASENDGNLEEVAIITEKRDKSSSKKLQEAKTSTTTK PKPSTTPAITDTTAAAAAAAAAAALSENALPEEFVKNMTELSFRDLEEIP QTSGLSLWDDMDGDPFAITSLAASVMDDSPAHFPLLDDPPIDFAHAATET LEREERRQRQHGLLPMGFPAAFGNDDAPSTVDRLSEVGMSIGQRASETAA TAAMTVPTETADNKNASLSLLVERYRPARGLQSSPGLSQELPALAEQSNA VADSTASVFLPPILEEDIVPIAGAGHVSEDRGGNTVAQKESGDAYVGRTT LIEGAARTGGWERNNTVEDFYEARLKEVVDVSQGLDRYWMEPLMSLTKPE ARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV back to topmRNA from alignment at H-paniculata_contig4119:448..13882+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4119.10606.1 ID=mRNA_H-paniculata_contig4119.10606.1|Name=mRNA_H-paniculata_contig4119.10606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13435bp|location=Sequence derived from alignment at H-paniculata_contig4119:448..13882+ (Halopteris paniculata Hal_grac_a_UBK monoicous) TGCGCTTGCTGTGTTGGGTGAGCCTGTATCAACAGGACACGCTAAGAAAC
AAAAACTAGTGCATGAAGAGGACACTGGGTTCATTGTGGAATTTTGTTGT
AGCAATACATTGCTCGCATGCCACGCGCCTGGCTCCTCCATCCTTGGCGT
TCGCTTTCATGCCGCTGGTTATTGGTAATGGCTTCGTGAAGAAGGCTCTT
TTCGAACCCAGCACTCGGCATGTTCTGTCACGTAACAGTCGACAACTGTC
GACACTGCCCCTTACCTCCAAACCCAAGCGGGCGCATATCCTGCAGTGCA
TGGCTACATCTTCTTCAGCTTCTTCTCGAGGACGTAGAACTCGAGCGTCA
CCACCGGCAGCGGGCGTACAAAGAGGAGGAAGAGGTAGTAGTAGGCGAAG
CAGCAGCGCTCCGGTTTCCACATCATCCGCCCGTCGGTCTTATGTGTCGT
CGGACTATAGAGGGGTAGTTGGGGGGCCGAAGGGCAAGTGGAAGGCTCGT
ATTTCTTCCAAGGGAGGACTTCAGCAGCTGGGCACGTTCGGGTGAGTGCA
ATGCTTGGCGTTTGTTTCGCGTTTTGCGATATAGAAGTGCTAAATTCATG
ACCAGTTAATAAACATGACATCTTGCGATTGACATTTCCTGCTGTCAACT
TAACAACCTGGGTCCGTGACTGAACGCATGTGGAAGATACCAGAACGGAT
ACGGTGTACGGGCCATGTCTCGTTCTCTCTGTGGAACACTTGAATGGGCA
AGCGATGGAAATGGTTATAACCACACCCTTTCGGGACAAGTAAATTTTTA
GGGAAATGCATTGGCACCATTGTCTCTTAGAATGTTTCTGTCGATACACC
GACTGGTTAACCTCCTTCCCCCCGACAAAAGAGCTTGGCTTTAGCCTTCA
GTCGTGATCATAGCCAGTTCTTTATACGGGCGAACAGTACGGTACAGGAC
GCTTGAGAAATCTTACGGTACAGTACGGTAAGGATCTGGACCGTAAGTGT
ACCGTTCATACGGGCCATATGAGGGGTTGCCCGTATGATTTATACGGGCT
TATACGGTTCCGTACCGTACGATGAGAAACTGTACGACACGAGATTTTGA
GCTGGTTTCTCGCCCATAACGACTCCTCGGCTGCATCTAATGTTTGGGAT
AGAGTCGGACATCAGCAGCTCGCCGTCTAAGCAATCAAGTAGGTGATCTT
AAAAATATTAAACTATCACTACTAATGGAATCCTTAATATGAGGCGATGC
CTATCAAGTACATCCCGATGCTCTTTGCTCTGGCTTTAGCGGATAGCTGT
TCCGTCGTTGTGGCATTATAATACCGGGTCTTGTGAATGGAGAATGGAGC
ATCGACGGAGAATGAGATTTGCGGATGGCTGCCAGCTGCAGGTGCAAACA
TGTTTCACCTCCAAAACGCTTCAGGCACTTGGGATGTGAGAAAAATACCA
AAGCAAGATGCTCACAGGCAACGTGAGAGCCGATCCATAGGCACACAACA
GGCGATACTCGTGATTGGTGATCAACTTTCTTGTTGGGATTGAAGTTCCG
TTGAATTTGAATGGAATACTCCGAAAATGGTGCTAGCGAAAGGCATTTTC
CGGTTAGAGTTCGTGTTCATCTCACTGCTATTTCCTCTGCACAAGAATAA
TTTGGAAACCTTTTCATACCTTGGTTTGCACGGAAAATGCGCAGGGAAAG
TGCCTTTTGGTACCACAATTTTCGAAGCATTCCAATCAAATTCAACGGAA
CCTCAATCCCAACAAGAAATTTGATCCTCAATCCCGAGTATAGCCTGTTA
CACGCGACAACGCGTATCGTGCACTACCTACTCTCTGTGAGTTTGACGCT
GACAACGCATCCTCCAACGCGCAGAGGCCTGATCTCAAAGACACAACAAA
TACATCCCACACATGACGCAACTGCGTAAGAGTTCTTGTTTCTGAGGTCG
ACAAGCAAAACATTATTTTCCATCGCAGACTCAGATTTTTTTTTTTTTTT
TATAATGCAATATCGGCATATCCAAAGCGTCTAACGTTGAAATTAATCTA
AATAAGCTCAAATGTATCGTTTTCTAATCAACCTTTTATGTTGTACGACT
CTTGAATCATTGAGTATTTAAAAACTAGTATATATATAATTCGAGAAAGT
CTTGTGAAGTTCTAATAATGGAACTATTTCACATTCTCGCATCATACGGT
AAATGCTTTGCACCCTACGAGGCCAATACCCTATACTTACCCTTTCGTCC
ATGTGGAAGATCCTCGGTCATCACACCTTTAATGGGCAGCGCTGATGAGG
AAGACACGCTACTACGATCATCAGTGCGATAACAAAATATTGCATGCTCA
AGATAGATTATAGATTGCATTACTGCAACAAACTACGATCATTAATCCTG
GCATCATCTTTTATCTCTCTCCAAAGTGCCTAAAATGTTTCGGAGGTGAA
ACCTTTTTCCACCTCCAGCTGGCAGCCGTCCATAAATCTTATTCTCCGTC
AATGCTCCATTCTCCATTCACATGATACGGTGTTTGGTGGATTATAAATT
ATGGTGGCGTTGCGAGATACTACTACTGAATACATCATATTACGTCACAA
TATTACATATTTTACATTACTTCACCGTACAGATTATGTATTGAAAGCCT
TTACAACAGCAAGAGCAACGAGAAAATCAGAAAAAAATATAGGAACCAAG
TACAAGAGGATGCAAAAGAATAAAACAACGTATATCAACAAGACAAACAA
CCAACAACACGAACAACGAGACATCTCGATCAAATTGTACAATCGCTGGC
GCTGCCCTACAGTGCCGCACCCGATGCACCCCCCTCCCTAATCATCAATG
CTGGCTTCTCCCTCGTAATGTCGTAGCCACGGGCTCCCTAGTCTATGACT
TCAATCACTTCCCCTGCCCTTGCTGCCTGAGCCTCGGCAGCCAGCATCCG
CCCCCTTTGCTGTATCGCCTTCATTCCGTCCAACCTTTGCAAAACCGCCC
GCACTTCAGGGATGCGCTCAAAGTTCAGCTTCAAAAACATCATCTTGTCA
ACACGCTCTGGCATCATCCTGCGCCTGAGTTTGCTCATGGTGATGGCCAA
CAGTGAAAAGTCGCGCTCCGATTGGCAGTTTGTACTCTCGATGCTAAGGA
AGACCCTTGCTAACATGGACAGGAGAGGGGATCTCGGCTTTTCCAGCACT
TTGCCGTTATTATCAAGCCTCGGCTTTGCTGCATCACTCCAGTACTGCAG
CAAGTCAAATTGATCGCTCACGATGGCAGACGCCTTGTCATCCTCTGCGA
TTTCCGCCTCCAGACGCGATACCACGGTTAAAGATGGCCGCTTCTGCGCC
TCAGCAGCCTTCTTTGCTTCTTCCTGCTCTCGTGAAGCCTGGCGCCTCTC
GAGTGAACTCTTCGCACGCTTTGCCGGGGAAGGTTTGGGGGAAGCTTGCC
TGCCACTCTCGCGGACTGCAGCAATGGGGGCAGGTTCGGGGCGGGGGGGT
CCCCCGGCTTCATTCATCGTCGAACCGATCTTTGTCAAAGCTTCTCGAGC
CCCCGCTCTCAAGCGACCCTCATCGTCACCGTGTCCACAGACATTAGAAG
ACAACGACTTGTAGCGTGGGTCCAACCAAGTAGAGGGCGATTAACTCTGC
GTCAGCCATGGCGCTGCCCACCTGGCACATCTGCAGCTGCTCCAAAGCGA
CCCGTCGCATAGTCTGGCTGTCGTCCATGAGGTCATCGACTTTGACCATT
TCGTTCTCGTCCGCGATATCGACAGTGGCATCGCGACGGCTCCTCCAGTC
GATGACCTCCACTTCATCGAGACTCAGGATAGAGCATAGCTTGTGACAGA
GGAAAATCGAGCGACTCAGCTGGCCGTCTTTTACTCCTTGGATGGCGTTG
ACATGCTTCAAGGTCTCCAGAATGCTGCAAACCTCCTTAACGACAAGCCG
GTCCATTGGCGAGGGGGCGCGCCAACGCCAGCCCATGTGAGGATTCATGC
GTAGATACTCGAAGATTGGCTCCTCTAGCACGAGCGTACGTGACAGAAAG
GTGAAATCTGAACCCCACCTATCGCGAAAGAGAGGGCAACAAGGGGGGCA
ACATCAACTTACATGTTACATGTTGGGTATGGTTGTTTATTACTGGTCTT
GTGTCTAGTGATGAAAAACAAGAAAACAAGGGCTAGATAATTGGTTATTC
ATCGGGCTCGTTGAGATAGACCCATAAAGAGTGATGACATTAAAAAGAAA
ATGAGCACTCAGTGAAAATGCAAACGGCAGTGCACGGGTGTCATTAGAAA
GGGAAAATGAGAAAAGCAGTAGTTACATGGAACTGATGATATTCACTATT
AGCTATTGATCCCAAAGACCCAAAGAAAAGATCTCACCGGGTATCATTTC
GACGGGCTGTGTTGAGCACCGTTAACTGTCGCCTGCCTATACTTGCCGTC
TCGCAGTCCTCGCCTTCCGTGTGCTTGTTTTCCCCTGTACCACCCCATGT
GCCAATGCCTCTGTTGCCGTTGCTTTCGGTGTCTTCGTCCTCCTCGTCTT
CATCAGTGCATTCATCTCTAGTAGCAGGCTTCAGCGGCTGGGCACGCAGA
TAATCGTCCTCCATCACTTGTGCGTCCAGCCTCAGCTTCCCCAACTCTTT
CCGCCTGTCGTCATCAAAAACCTGCTGGGTGGCGCGAAGAGTATCGTTGT
TGACCGCAGAATGACTAAACATTCCCACCAGAGCTGCGAAGAGGGACACG
AGGTTTTTGACAGGCTCATTCTTGCACTTCTTGGCGCTTCCGGCAGTCCC
TAGAGACCACATCGCCGAAGTGTTGATACGATGTCCTCGACACATCAAGA
TCTCTAGGCTCAGTGCCTTGCACGCGTTCACGACGTTACCTCCTTGGTCA
ACCGTTGCCGCGATGAAGACTTGAGAAGGTTGCACGAATGGAATAAAATA
TCCGAAGTTGTCACCTGCAGGTTAGCACGAAGGAGTGAGCAGAACAGTAA
CCGCAACAGAGAGGAGGATGGCTGTATTATAGGCAGTTCGACTCTACAAT
AACTTAGGGAAAATGTTTCTATAGAAAATAGGGAAATAAGACATGTAAAA
TATGCGGCAGGCCCAAAGCCTCGAGCGAATCATCCATAAAACAAAAAACA
GAACACCAGAAAGCGGAAGGCTTGTAGTAATTGATATTCAAAAATGAAAT
CGAGTTTCCTCTGCCCTCCTCCCCCAATGTTCGCATCAGACGCATCTGTT
TTATCCACTCCTTGACGTCGTTCTCCTTGTGCGTACTAGGGAAATCTCTT
GTAGCCAGGCTAATATGCTTAGGCTGGAGGCTGCCGAGCCTAATTACCGA
CGCAAACGCTATGCAGAACTCTCGATTGGCAATAGTTGTCAAGTCTAGTT
GAAGCCCGTAGTACCCTCCCGTGTACCCGGCCCATTCAAACTCTTCCCGC
ATGTTCTTCAGCCTCTTAATGACGTCTGCCTTCACCTCGTCATACAGAGC
ATTCAGCTTCTTGTCAAGGACAGGGAATGAAGGCGTTGAGCTCACGTACT
CAGGCGAAAATTCTCCAACGAGCATCTTGAAGCCCATGTCATCGATGACT
ATCCACGGACGGCTATCCATGATGGTCCAAATGACCTTTGTCCGATTGAA
ATGGTTCCTCAGTCCGGGCGTGAGGGGCAGAGGTAGTACTGCCGAAAATA
TCCCTTCTCCCCGGTGTGACGGACGCTGCAAAAGAGGCAGGGAGGACGGT
TCACGGTCGTACATGAAGTTTGTGACTTTTATATTGGTGTGTATTACTGT
GGTACGTTGTAATCGTCAACGATGCACGCGTACGAGGAACAGACTAGCAC
CGGCGTGCAATGACACCCAGACACATGAAATGTCACAAGCAAATAGGCAC
ACTATTCAGTTCAACATACAAAAGACAATAAACAAAGATGAAAAGAACGC
TAAAATGTTACTGTCTATACTGTCTGTATCGTCAACTGTCACACACTTGA
AGTAGAAAAAAAAAATTAAGCAACTAAAACACAAAACACGGACAATAACG
AACAAACGGACACAACATTAGTTGTGATATTGGTGAAATGGAGAATGAAC
GTTTTTTGGAGAACGAGCTCCATACTTTTTCGTCTATGCCACCGATTTTT
CCGCCTGGTGTAGTTTCCGACCAACATGGCCGATTCGGTTCGTGGATAGC
TCGATCAAATCCCAAGTCACCGGATGACGTCAATACCTCAACTGACTGAA
TCCGATCCATGGTTCGGAATTTATGACAGTGACAAGAATGGGTGGGAAAA
CGATTAAACAATTCGGCGCAGAGTTTTTAAATCGGTGCTCTTGCTTGCAG
CAGCCCATGCAGGCCTTTCAATATGCTGTAACTCGCCACCGAGACTACTA
TCGGTAACCGTACAGCAAGTATCTGCGTGCTGCTATGAGCAAGGCCGTTT
GTTTGAGCCGCTGCACGCAGTCTAACTCGTCGAATTGAGCGCGCTAGAAC
TTGTCCCATGAAAAAAAGTATGGATTTCAGGCTCGTTCTCCAAAATACAG
TTTGTTGTTCGTGTCACCAATATCATTTTATTAGGACAGACTTTTTACCG
TTACTGATTGAATTGTACACCTACTATAGCTGTAGTCACTGCCAACCAAA
GTACAAAACACAAAAAACGATCACGACCACACCTTACAGCCACTACTGTA
CTGCATGGTGACAAGTGAGGCGCGAAGTCGAAACCAATAAAACATGTACA
AATAACTCACTTGCGACGTGTCCACCAAGTATGGCGCCTTTATTTTCTTT
GGTCTCCCTGGAATGTCTGCTCGCCGCCAGGACCTCCCTTGCTATCCCCG
GATGACAACTGTTTAAATGCTTCCTCAAGATCGACGTGCCGTCTTTCGAA
GTTTGCCGTCATCACCACGCACATTGCCGCAGACGTTGTTGCCGTTGCTC
TTCGGGATGCTGTACTTGCTGAAGTAGCGCCATGTAGGCGACGTTCTCTT
TGCCATTTCTCTTTCCCATGGCCAACTTGACTCATTTCCCTGATACGATC
GGTGAAGTGGACGCGAGTCTCGTACCAGACTCGCCGCCGCCTGTAGACTC
AAGAAGTGTCTGCACGTGCGTGCGTCGCGCACACGAAAAATGGTGTGGCT
GTGGCTTAGGCTGTGGCGTTGTGTCATCCGCTTATGCGGCCGCTGTTTGC
GTTGACGGCGTTGATAGTGGCGCGCTGGACGAACCGCCCTCACATATGGG
CGTATGTGACGCCATGAAAGTTGCTCACTACAGTTGTGTCCCTGTACTCT
ACCACGAAGTAGTACTTGGTAATAGTACCGTTGTCGTACCGTACATACCA
CCATCCATTGCATTGTGTTTCCGTTTACGGGCAGATGTATTTGTGCATGT
GACCACGTGGCATGGAGTGCCTGTACCGTACAACCGTGTACGGTCCAGGA
CCGTATCTGGACCGTATCCTGACCGTATAAATCATACCGTACACGTTGGT
TTGGCCCGTATGAACGGTACGGTAACGGGCCAGTATGGTATTTTGAAAAT
TTCTACGGTACGATACGGTACAGAGGGATCGAGGATTCCTACGGCACGGT
ATGGTACAATACAGGGATGACGAGAAATCCTACGGTACGGTACGGGCTAT
ACCGTACCGTACCGTACGTGTGGACCGTACCGTATAAAGCCCTGATCATA
ACCGATTTAGTCCGACAGGAACACATGAAAAGTCCGACTGACTAATTAAC
CATGGTTCTGTCGACCGGCTCCTCGTGCACAAACTTATCCGCAACTGTTC
GAAAAACAAAAAAACGCCAGTCATTCGAGGTCGCCGCAGCCCGTATTCTT
GGGAAGAATCGAAGCAGATTATCTCACACTACTGAGTCTCCGTATGCAAC
CACGTGCGAAAATCGCTCTAGCAAGCGAAAAGGCAAGCTGTACACACACT
TGCATATGTGCTGCTGACTGAGACCGTGCTTTCAGTTTTTTCAAACACAG
CTCCCCATGCAATTTACTGCTGTGCCACGATGGCGGAATGCAGCACCCAT
ATATAACTAACTTTCGATGATGTGCCGAAGCCCCAGAAGGGTCGCAGCGC
TCGAAAACACTTTTGTCCTAGGTCGGCCGCCCTGCGTTTCGCCGTGCAGC
TAGCTTCTCTTGATCTTCATGGGCTAGCTACGTTATCTGTAGCTTCTCTC
AGCGGACACGACATGAATTGCATGCAATTTTCGACGTTAAGGTAGTTTTG
TCACTCAAAGCTGCGCGAGATGTTGACTCTGTCTGCCAGACGCTGAATGG
GCCCGCGCGCACAGTATTCGGCGTGGACTAGCTACCACTACTCGCAGAGA
TTGGCACACGGCGGTCGCGATATGTATTACTGCAGTCGAGATTTTATCCC
AGATGTGCCGGGCGAGATGTTGACTTTGTCAGCTATTGAATCGACCCGTG
CGCACACAGTGCTCGTCGTGTGCAGGCACTGTTAGCAGCAGAGATCGGGC
TGATACACCTTGGCCGCGATGTGTACTGCAGTATCCATGGACTCTGTTCA
CGCTATTGTGTGCATGGTGTTCCCCGCGACTGAGAGGCATGTGATTTGTT
GATGTATATTGATGCGCATCGCACGGTATTTGATTAGTCCATGCGCATCG
GGACTTGCCCCCCTTGATGGAGTGTTCGCCGATACAAATGCGCCGCGGGA
TCGCCGGCACCTTGCCAAACCGATTTTTGTTAGACTGGAGCACGAAATGA
ATAATAACTACAACCCCCCCCGCTCCCCCTCGCCCCCCCCCCAATATCCT
TATTGCACTTCTTGGGGCTTGGTTCAAGCATGGCCTTCCGTGTGGCCCCT
TGATGTGACACGTGAGTCGACGTTTTTTGAGACACAGTCAACAACACACT
CCCAGACAGGGGGGCGATCTCGCCCTAGCGTCAGTGCTGTCACAACAAGC
CATTTATCTTCTTCGTGTCTAATGCGTGCACGGAGTTGTTGTAGGCAAGT
AACTCTCAGTCGACCTTTATCTTTTCGAACACACTCTGCACCCGTCTTTT
TCCAACATGCGTTACCCTCCGGCGAAGCCGGCTGGGGACCATGCCCGAGG
TAGCGCTGGCTGTAATTTTTTTCGCGGCAACACCATTCTTCCCCGATCAG
CACGCACCGATGGTACTACGAAAATACATCTCTCATGGAGAAACTGAACG
GACCTATGCAAGAAAGGTCCGGTTCAACAGACCGATTTTAGGGAAGGAGG
GTAAAATTTGCAGTCCCTATCGGGAGAACCAAAGATGCTCTTCGCCAGAC
ACAAGCTATTTCAATGGTACAACCGACCTAATTGCGTTGACAGAAAGAAG
GTGGTATGCGTTGGTAGAAGTTTACATCTGACCTAACTGCTTTGGGAGCA
ACCCAACAGCCCTAACTCTAACGCTAACCCAAACCCTGTGATTCTAGTAC
GCGTTGGCAGAGCGCTCATGTGTGTGCGTTGATAGAGCTGTGTTTTTAGT
AAGTGATTATATCTAACCTGACTGCGTTGGCAGGGTGTGGGCGCGTTTGT
GGACCAATCTAATTCTGTTAATTCTGTACTTGTAAGTGCGTACGTTTGCT
GTTCGTGATAAAAAATCGCAAATAAACCCCTCTGTTCTTGAAGCAGTCCT
ACTAACTTGATTTTGCCTAAGTCCACTTAGTCCCTCCGCATCCCGTGCCC
TCTTGAAAACAAGACGTTTCTTCAGCGATGAAACCAGCCTGCTGCAGATA
TGCGCCGCGTTTCATCCGTTCTACCATTTCCTGCAGTAGCGTTGGAGGCA
AGACGAGAAGTGGTCAGGATTATCACCTTATGAAACACAGAAAAACACGG
ACGTAAACACACCCCATCTGCCTCATGAAGTACCCATACCTACGCCAAAT
ATTTTGAGTAGGTGCGAGTTGGATGCTGCCAGGGCATACAACAAGGCGGC
TAGAACGCTGCATGGATCGGCGGCGAAGCTGAATTCCCTGCCTGAAGAGG
CAGATGCAAAGACTGGAACGGTCCAAGAAGTCACAGCGGAGGCGCTAGAA
GAGGGTGGGATTGTAGTCACTGCGAAACTTGGAGCAGGAACAAGAGGGAA
GGCATCGAAAGCGAAAGTAGGAGCAAGAGCAAGTGCTGCAGAAGCAGTGA
CAGAGCACGATGTTATGAGCGGCAATTCTACTTCTCTAGCAGTAGCGGTG
ATGGGGGAAGGGATGGGGTCTTATGCGAGCGAAAATGATGGCAACTTGGA
AGAAGTTGCCATCATTACAGAAAAGAGGGATAAGAGCAGCAGTAAAAAAC
TCCAAGAGGCCAAAACATCCACGACGACCAAGCCAAAGCCGTCCACCACT
CCGGCAATAACCGACACTACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCATTGTCGGAAAACGCTCTGCCGGAAGAATTTGTGAAAAACATGAGTA
ACGTGACTATGGTGTCACGATCTCCAACGATATCTACGTCCGCAGAGGTT
GCAACATCAACAGCAACGTCTTCTCAGTCTGCAAAGTCAATAGTAGGTCA
GCAGCAGCAGCAGCAGCAGCAGCAAGAATCCCTGCAACCAGAGGTGGAGT
CCGCGCAACGTGAGTCCAAGCCACGCAGTATCGATAGCAACAGTACCAGC
ATGGGTGACAGCAACGAGATTGGTACGGACAAGGCCACCGGACAAATGAA
GAAACTGACAAAACAAACCATGTACGTGGCTGCAACAGCAATTGCTGGCA
CCGAAACGACTCCACGAGTAAACGCCACAGCAGCACTACCAACTCTTGAA
AATTCAACGACGACAGAGACAATCGACGCCGAGGTGGCCAGTACTGTGAG
CGCCGTGTTCTTTGCCCCCGCGGTGGCTGTAACCCGTGTAAAATTGACAA
CGGTAGAACCGAAACAGGAGGCAGTAGCGCAGCAAGAACAATTGCAGGCT
GCCGAGGTGGAATCGAAGGATGCCAAAAATTCCGAGAATGCAGCGATCGA
CCACGAGGTCATGGTAAATGCGAAGTGGTCGGCGGGGGGGGCAATACCGA
CAGCAGAGCTATCCTTTAGGGACCTGGAAGAGATACCTCAAACATCGGGA
CTTTCACTGTGGGACGATATGGACGGCGATCCTTTCGCCATCACATCATT
AGCAGCATCGGTGATGGATGATTCACCTGCACATTTTCCTCTGCTTGATG
ATCCTCCCATCGATTTCGCTCATGCCGCGACGGAAACTTTGGAGCGGGAA
GAGAGACGGCAACGGCAGCATGGGCTGTTGCCAATGGGATTCCCCGCCGC
CTTTGGTAATGACGATGCGCCATCGACCGTCGACCGCTTATCAGAAGTCG
GCATGTCGATAGGACAGCGAGCATCTGAAACAGCAGCTACAGCGGCGATG
ACTGTGCCCACCGAAACCGCCGACAACAAGAACGCATCGCTATCACTACT
GGTGGAGCGATACCGGCCTGCACGAGGACTGCAATCATCTCCGGGATTAT
CCCAAGAACTGCCCGCCTTGGCGGAGCAATCAAATGCTGTCGCCGATAGT
ACCGCCTCTGTGTTCCTGCCCCCCATTTTGGAGGAAGACATTGTCCCGAT
AGCAGGGGCGGGGCACGTATCGGAAGACCGGGGAGGTAACACGGTGGCGC
AGAAGGAGAGTGGGGACGCGTACGTGGGGAGGACGACATTGATTGAAGGG
GCAGCGCGGACGGGGGGATGGGAAAGAAACAACACCGTGGAAGATTTTTA
CGAGGCCCGACTTAAGGAGGTGGTTGATGTCAGGTGAGTGATTTGGGAGA
CCGGTTTTGATTGTGTTTCGCTCGACTGCTCGCACATGCGATATGCGTAT
GCACGGTGCCCTTATCAATCACGACTTATTCATTCACCATTAGAGCTAGA
AAGTATAAGGCATCCATGAAGGTGCAACGTTTTTCGTTTATTCATTTTTG
CCAGGGCTTTTCCTGACGAATCAGTCCCTCCCTTTCTTTTTTCTATTCAT
CATCGCGTCTTCGAGGTTTTGTCGATAAATGAGGTCGAGCAAGCCTCCGA
CACACAACAAGTATCCTTCCGGGAAAGTGATGTCATTACCATGGATGACG
TCTCCTGACAACCAAAGATTTTCGGCCAATCAGAATTCTCCAGTAAAACA
AATTGGTCAATCCATAATCTGCGGGTACCTTTTCCGTTTCTCTTGGTAGG
ACCAACAGGCGCACGCAGGGCAGGTCTTGGCACCGTGGTGAGATCTCTTC
CGTGGTGGTGATGGAGTATCGAAATGTCGATGACTTGTTAGATTGTCATT
GCTCAACCATTAGTAGAGCAATGATGTACGCTGTATGTTCAGTTTTGTGT
GGTACATGAGCATATAAGCTACATTTCATTCTAGCGACTTGGTGGTATGC
TGCTATACTTCTGTTTTCCTAGCTGCTCACTCAGTTTCGAGGACTGAAAA
AACAATACAATAGATAAAACAGAGTCTGAAAGCGTAAGCAGATGCACGCT
TGGGTGGGTAATATCCTTTGAGTAAGATATAGGGCAGCAAAAAGCAAAGC
CTGCTCATGTGTCTTACTCCATATTGACAAATAAAACCCATATAGATGCA
GAGTTACTAGCTAGCGTTCAGGCCGGCGCTATTGTTGAGGATTGATATCC
GCTTGGCCAGGAGTGCCACACACGAAAAAGTGCTTGCTCCCCTCTCTCTT
ACACTTTGCCCCCGCTGTGCTCTACTACTACTGTTGCTACGTGCAAGTGA
CAAACGAATTGGATTCAATCGTTCGTGTGCGTAAGATGATTGAGACTGAT
ACAACATCTCTACGAGTAGTAGCAACAACATATATAAGTGACAAGATAAC
CAGTAGTGCACTACATGGCCATACGCATCAATTTCCAAGGACATATTCAT
CTGGAGGATGGCATCTACACTAGGAGAATGCGGTTTGATACAGTAACCAC
AGAGGATACAGCGAGTCAAAAGTACAAGCAGGTATGCATAACTGACTTTT
TACTGTAGAAAATATGACAATAACCGTTAAACAAAATGGGGATATGCTCA
GCATCTTCCAGCTGCTGGATTATTTGGTTATTATGCACAAAATGAACAAG
CTGAGGAGGATACCCTTCGTATGTCGCATGCAAAATCCACATTGTATCAC
CGCTAATGCAATTCTTCGTATACGCGCTGCATAACATGTAACACTGGTGG
CCGCTGGGGTTGTCCTGTTGTATTTCGGGGGTCGGTCACCAGCAGCCAAG
GACTAGACCGTTATTGGATGGAGCCCTTGATGAGTCTGACCAAACCAGAG
GCGAGGAAGGTAGCGATGCAGCTGTCCAGTGCAAACAAGCTCGGGTATGT
GTCCACCAGGGGAGGCCCGGTCGGCAAGGGCTCGCTGCTGGAGTTTGTTC
TCGCTCAGAAGGAGAAGCACCCTACCAAGGTAGTT back to topCoding sequence (CDS) from alignment at H-paniculata_contig4119:448..13882+ >mRNA_H-paniculata_contig4119.10606.1 ID=mRNA_H-paniculata_contig4119.10606.1|Name=mRNA_H-paniculata_contig4119.10606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3870bp|location=Sequence derived from alignment at H-paniculata_contig4119:448..13882+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAAGAGGACACTGGGTTCATTGTGGAATTTTGTTGTAGCAATACATTG CTCGCATGCCACGCGCCTGGCTCCTCCATCCTTGGCGTTCGCTTTCATGC CGCTGGTTATTGGTAATGGCTTCGTGAAGAAGGCTCTTTTCGAACCCAGC ACTCGGCATGTTCTGTCACGTAACAGTCGACAACTGTCGACACTGCCCCT TACCTCCAAACCCAAGCGGGCGCATATCCTGCAGTGCATGGCTACATCTT CTTCAGCTTCTTCTCGAGGACGTAGAACTCGAGCGTCACCACCGGCAGCG GGCGTACAAAGAGGAGGAAGAGGTAGTAGTAGGCGAAGCAGCAGCGCTCC GGTTTCCACATCATCCGCCCGTCGGTCTTATGTGTCGTCGGACTATAGAG GGGTAGTTGGGGGGCCGAAGGGCAAGTGGAAGGCTCGTATTTCTTCCAAG GGAGGACTTCAGCAGCTGGGCACGTTCGGATGAAGAGGACACTGGGTTCA TTGTGGAATTTTGTTGTAGCAATACATTGCTCGCATGCCACGCGCCTGGC TCCTCCATCCTTGGCGTTCGCTTTCATGCCGCTGGTTATTGGTAATGGCT TCGTGAAGAAGGCTCTTTTCGAACCCAGCACTCGGCATGTTCTGTCACGT AACAGTCGACAACTGTCGACACTGCCCCTTACCTCCAAACCCAAGCGGGC GCATATCCTGCAGTGCATGGCTACATCTTCTTCAGCTTCTTCTCGAGGAC GTAGAACTCGAGCGTCACCACCGGCAGCGGGCGTACAAAGAGGAGGAAGA GGTAGTAGTAGGCGAAGCAGCAGCGCTCCGGTTTCCACATCATCCGCCCG TCGGTCTTATGTGTCGTCGGACTATAGAGGGGTAGTTGGGGGGCCGAAGG GCAAGTGGAAGGCTCGTATTTCTTCCAAGGGAGGACTTCAGCAGCTGGGC ACGTTCGGGTGCGAGTTGGATGCTGCCAGGGCATACAACAAGGCGGCTAG AACGCTGCATGGATCGGCGGCGAAGCTGAATTCCCTGCCTGAAGAGGCAG ATGCAAAGACTGGAACGGTCCAAGAAGTCACAGCGGAGGCGCTAGAAGAG GGTGGGATTGTAGTCACTGCGAAACTTGGAGCAGGAACAAGAGGGAAGGC ATCGAAAGCGAAAGTAGGAGCAAGAGCAAGTGCTGCAGAAGCAGTGACAG AGCACGATGTTATGAGCGGCAATTCTACTTCTCTAGCAGTAGCGGTGATG GGGGAAGGGATGGGGTCTTATGCGAGCGAAAATGATGGCAACTTGGAAGA AGTTGCCATCATTACAGAAAAGAGGGATAAGAGCAGCAGTAAAAAACTCC AAGAGGCCAAAACATCCACGACGACCAAGCCAAAGCCGTCCACCACTCCG GCAATAACCGACACTACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC ATTGTCGGAAAACGCTCTGCCGGAAGAATTTGTGAAAAACATGAGTGCGA GTTGGATGCTGCCAGGGCATACAACAAGGCGGCTAGAACGCTGCATGGAT CGGCGGCGAAGCTGAATTCCCTGCCTGAAGAGGCAGATGCAAAGACTGGA ACGGTCCAAGAAGTCACAGCGGAGGCGCTAGAAGAGGGTGGGATTGTAGT CACTGCGAAACTTGGAGCAGGAACAAGAGGGAAGGCATCGAAAGCGAAAG TAGGAGCAAGAGCAAGTGCTGCAGAAGCAGTGACAGAGCACGATGTTATG AGCGGCAATTCTACTTCTCTAGCAGTAGCGGTGATGGGGGAAGGGATGGG GTCTTATGCGAGCGAAAATGATGGCAACTTGGAAGAAGTTGCCATCATTA CAGAAAAGAGGGATAAGAGCAGCAGTAAAAAACTCCAAGAGGCCAAAACA TCCACGACGACCAAGCCAAAGCCGTCCACCACTCCGGCAATAACCGACAC TACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATTGTCGGAAAACG CTCTGCCGGAAGAATTTGTGAAAAACATGACAGAGCTATCCTTTAGGGAC CTGGAAGAGATACCTCAAACATCGGGACTTTCACTGTGGGACGATATGGA CGGCGATCCTTTCGCCATCACATCATTAGCAGCATCGGTGATGGATGATT CACCTGCACATTTTCCTCTGCTTGATGATCCTCCCATCGATTTCGCTCAT GCCGCGACGGAAACTTTGGAGCGGGAAGAGAGACGGCAACGGCAGCATGG GCTGTTGCCAATGGGATTCCCCGCCGCCTTTGGTAATGACGATGCGCCAT CGACCGTCGACCGCTTATCAGAAGTCGGCATGTCGATAGGACAGCGAGCA TCTGAAACAGCAGCTACAGCGGCGATGACTGTGCCCACCGAAACCGCCGA CAACAAGAACGCATCGCTATCACTACTGGTGGAGCGATACCGGCCTGCAC GAGGACTGCAATCATCTCCGGGATTATCCCAAGAACTGCCCGCCTTGGCG GAGCAATCAAATGCTGTCGCCGATAGTACCGCCTCTGTGTTCCTGCCCCC CATTTTGGAGGAAGACATTGTCCCGATAGCAGGGGCGGGGCACGTATCGG AAGACCGGGGAGGTAACACGGTGGCGCAGAAGGAGAGTGGGGACGCGTAC GTGGGGAGGACGACATTGATTGAAGGGGCAGCGCGGACGGGGGGATGGGA AAGAAACAACACCGTGGAAGATTTTTACGAGGCCCGACTTAAGGAGGTGG TTGATGTCAGCAGAGCTATCCTTTAGGGACCTGGAAGAGATACCTCAAAC ATCGGGACTTTCACTGTGGGACGATATGGACGGCGATCCTTTCGCCATCA CATCATTAGCAGCATCGGTGATGGATGATTCACCTGCACATTTTCCTCTG CTTGATGATCCTCCCATCGATTTCGCTCATGCCGCGACGGAAACTTTGGA GCGGGAAGAGAGACGGCAACGGCAGCATGGGCTGTTGCCAATGGGATTCC CCGCCGCCTTTGGTAATGACGATGCGCCATCGACCGTCGACCGCTTATCA GAAGTCGGCATGTCGATAGGACAGCGAGCATCTGAAACAGCAGCTACAGC GGCGATGACTGTGCCCACCGAAACCGCCGACAACAAGAACGCATCGCTAT CACTACTGGTGGAGCGATACCGGCCTGCACGAGGACTGCAATCATCTCCG GGATTATCCCAAGAACTGCCCGCCTTGGCGGAGCAATCAAATGCTGTCGC CGATAGTACCGCCTCTGTGTTCCTGCCCCCCATTTTGGAGGAAGACATTG TCCCGATAGCAGGGGCGGGGCACGTATCGGAAGACCGGGGAGGTAACACG GTGGCGCAGAAGGAGAGTGGGGACGCGTACGTGGGGAGGACGACATTGAT TGAAGGGGCAGCGCGGACGGGGGGATGGGAAAGAAACAACACCGTGGAAG ATTTTTACGAGGCCCGACTTAAGGAGGTGGTTGATGTCAGCCAAGGACTA GACCGTTATTGGATGGAGCCCTTGATGAGTCTGACCAAACCAGAGGCGAG GAAGGTAGCGATGCAGCTGTCCAGTGCAAACAAGCTCGGGTATGTGTCCA CCAGGGGAGGCCCGGTCGGCAAGGGCTCGCTGCTGGAGTTTGTTCTCGCT CAGAAGGAGAAGCACCCTACCAAGGTAGTTCCAAGGACTAGACCGTTATT GGATGGAGCCCTTGATGAGTCTGACCAAACCAGAGGCGAGGAAGGTAGCG ATGCAGCTGTCCAGTGCAAACAAGCTCGGGTATGTGTCCACCAGGGGAGG CCCGGTCGGCAAGGGCTCGCTGCTGGAGTTTGTTCTCGCTCAGAAGGAGA AGCACCCTACCAAGGTAGTT back to top
|