prot_H-paniculata_contig4119.10606.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4119.10606.1
Unique Nameprot_H-paniculata_contig4119.10606.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length645
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: D7G3V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V0_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.660e-26
Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 0 
Query:  541 SGDAYVGRTTLIEGAARTGG--WERNNTVEDFYEARLKEVVDVSQGLDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV 645
            SG+     TT   GA   GG  WER+   ED YE  LK +V VS G   YWM PLM+LTKPE RK AMQL++ NKLGY S++GGPV KG+LL++VL QKEKHPTKV+
Sbjct:  137 SGEGGAAETT---GAWSGGGAGWERDEAGEDVYEENLKALVGVSTGPHGYWMGPLMALTKPETRKTAMQLTADNKLGYRSSKGGPVSKGTLLQYVLEQKEKHPTKVM 240
[Close]
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A6H5K8V0_9PHAE (MutS_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V0_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 7.860e-24
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0 
Query:  561 WERNNTVEDFYEARLKEVVDVSQGLDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV 645
            WER+   ED YE  LK +V VS G   YWM PLM+LTKPE RK AMQL++ NKLGY S++GGPV KG+LL++VL QKEKHPTKV+
Sbjct:  411 WERDEAEEDVYEENLKALVGVSTGPHDYWMGPLMALTKPETRKTAMQLTADNKLGYRSSKGGPVSKGTLLQYVLEQKEKHPTKVL 495
[Close]
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A7S0DPS9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DPS9_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 5.360e-6
Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = 0 
Query:  574 RLKEVVDVSQGLDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGP-VGKGSLLEFVLAQKEKHPTKVV 645
            +++++ +   G+D YW   L+ LTKP A+ +   L S NK G+    G P + KGSL+E+ +++KEKHP+K++
Sbjct:  235 KVQQITNQDHGVDGYWKPWLLRLTKPSAQNLVHTLVSDNKFGF--KHGMPKLKKGSLMEYAISEKEKHPSKII 305
[Close]
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A482SEF4_9ARCH (MutS_I domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEF4_9ARCH)

HSP 1 Score: 54.7 bits (130), Expect = 6.900e-5
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:  585 LDRYWMEPLMSLTKPEARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV 645
            +D YW+  L  + +  AR +  QL   N LG+ S  G P   G+LL++V+ QK+KHPTKVV
Sbjct:   58 VDPYWINQLKQIDRANARALISQLVPDNPLGFDSGNG-PAKTGTLLDYVIQQKKKHPTKVV 117
[Close]
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Match: A0A328AC93_9CAUL (Endonuclease n=1 Tax=Phenylobacterium deserti TaxID=1914756 RepID=A0A328AC93_9CAUL)

HSP 1 Score: 53.9 bits (128), Expect = 8.200e-5
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:  141 GKWKARISSKGGLQQLGTFGCELDAARAYNKAARTLHGSAAKLNSLPEEA 190
            G+W+A I   G    LGTFG ELDAA AY+KAAR LHG+ A+LN  P+EA
Sbjct:  113 GRWQAVIVCDGRRHYLGTFGAELDAALAYDKAARELHGAFARLN-FPDEA 161
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4119.10606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3V0_ECTSI1.660e-2658.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8V0_9PHAE7.860e-2464.71MutS_I domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S0DPS9_9EUKA5.360e-638.36Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A482SEF4_9ARCH6.900e-544.26MutS_I domain-containing protein (Fragment) n=1 Ta... [more]
A0A328AC93_9CAUL8.200e-560.00Endonuclease n=1 Tax=Phenylobacterium deserti TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 131..193
e-value: 3.3E-9
score: 46.6
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 131..186
score: 12.049
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 130..186
e-value: 3.6E-11
score: 44.7
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 101..358
NoneNo IPR availablePANTHERPTHR31677:SF41coord: 101..358
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..645
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 130..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4119contigH-paniculata_contig4119:510..13882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4119.10606.1mRNA_H-paniculata_contig4119.10606.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4119 448..13882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4119.10606.1 ID=prot_H-paniculata_contig4119.10606.1|Name=mRNA_H-paniculata_contig4119.10606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=645bp
MKRTLGSLWNFVVAIHCSHATRLAPPSLAFAFMPLVIGNGFVKKALFEPS
TRHVLSRNSRQLSTLPLTSKPKRAHILQCMATSSSASSRGRRTRASPPAA
GVQRGGRGSSRRSSSAPVSTSSARRSYVSSDYRGVVGGPKGKWKARISSK
GGLQQLGTFGCELDAARAYNKAARTLHGSAAKLNSLPEEADAKTGTVQEV
TAEALEEGGIVVTAKLGAGTRGKASKAKVGARASAAEAVTEHDVMSGNST
SLAVAVMGEGMGSYASENDGNLEEVAIITEKRDKSSSKKLQEAKTSTTTK
PKPSTTPAITDTTAAAAAAAAAAALSENALPEEFVKNMTELSFRDLEEIP
QTSGLSLWDDMDGDPFAITSLAASVMDDSPAHFPLLDDPPIDFAHAATET
LEREERRQRQHGLLPMGFPAAFGNDDAPSTVDRLSEVGMSIGQRASETAA
TAAMTVPTETADNKNASLSLLVERYRPARGLQSSPGLSQELPALAEQSNA
VADSTASVFLPPILEEDIVPIAGAGHVSEDRGGNTVAQKESGDAYVGRTT
LIEGAARTGGWERNNTVEDFYEARLKEVVDVSQGLDRYWMEPLMSLTKPE
ARKVAMQLSSANKLGYVSTRGGPVGKGSLLEFVLAQKEKHPTKVV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf