mRNA_H-paniculata_contig41189.10605.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: D7G1B2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1B2_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.150e-15 Identity = 34/55 (61.82%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 1 DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLFSM 165
DGA++ +NR++GE P++++VE+M+GEVFGGFA SAWSS +YYGTGE FLF M
Sbjct: 477 DGASYTTLYNRIQGEEPTFLIVESMRGEVFGGFATSAWSSGCQYYGTGECFLFKM 531
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: A0A6B2LNT5_9EUKA (TLDc domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LNT5_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 6.950e-8 Identity = 21/54 (38.89%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 4 GANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLFSM 165
G +W FF+ ++ P+ +++ + QG FGG+A+ W+ + +YGTGESF+FS+
Sbjct: 20 GISWTTFFSSLQDSGPTVILIRDSQGNSFGGYASQEWTPNTGFYGTGESFVFSI 73
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: W7T6X3_9STRA (Tld family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6X3_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 8.490e-8 Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSK-YYGTGESFLFSM 165
+GA+ FF + K + P+ +V+++MQG VFGGFA AWS+ + YYG GESF++S+
Sbjct: 559 NGASLTTFFKKAKDKEPTLLVLKDMQGGVFGGFATRAWSAKGESYYGDGESFVWSL 614
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: A0A4D9CRR4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRR4_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 2.180e-7 Identity = 26/56 (46.43%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSK-YYGTGESFLFSM 165
+GA+ FF + K + P+ +V+++MQG VFGGFA +WS+ + YYG GESF++S+
Sbjct: 1327 NGASLTTFFKKAKDKEPTLLVLKDMQGGVFGGFATRSWSAKGESYYGDGESFVWSL 1382
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: D7FL06_ECTSI (TLDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL06_ECTSI) HSP 1 Score: 52.0 bits (123), Expect = 2.660e-6 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 1 DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLFS 162
DGA+ +G P +VVE+ G VFGGF A + + KYYGTGESF++S
Sbjct: 635 DGASLWTLLQNCRGRGPCLIVVEDSWGYVFGGFVAGSMKESQKYYGTGESFVYS 688
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: A0A2P6NL90_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NL90_9EUKA) HSP 1 Score: 52.0 bits (123), Expect = 2.670e-6 Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 4 GANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLFSM 165
G + F+NR + PS +VVE+ +G VFG FA+ +W ++YGTGE+F+F++
Sbjct: 818 GVSLKTFYNRTENAGPSLLVVEDDKGGVFGAFASDSWRVEPRFYGTGETFVFTL 871
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: A0A7S1FBX5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FBX5_NOCSC) HSP 1 Score: 51.2 bits (121), Expect = 4.920e-6 Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 1 DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLFS 162
DG ++ + V + VVVE+ +G +FGGFA W K+YG+GESF+FS
Sbjct: 269 DGVSFATMYRNVGLRAKTLVVVEDSEGYIFGGFAPETWEPRGKFYGSGESFVFS 322
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: UPI00035981C8 (MTOR-associated protein MEAK7 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035981C8) HSP 1 Score: 50.1 bits (118), Expect = 1.270e-5 Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 1
Query: 4 GANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLF 159
GA++ Q RV+G+ P+Y++V++ G VFGGFA+ W K+ G FLF
Sbjct: 284 GASFSQLLQRVRGKGPTYLIVKDKNGNVFGGFASIPWEINPKFTGDSSCFLF 335
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: J9I6Q3_9SPIT (TLD domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I6Q3_9SPIT) HSP 1 Score: 50.1 bits (118), Expect = 1.270e-5 Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 1 DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLF 159
DG + FF + K + +V+++ G +FGGF + W ST+K+YGTGE+FLF
Sbjct: 378 DGDSVGTFFEKCKYWKYTLLVIKDTNGWIFGGFCSEPWKSTTKFYGTGENFLF 430
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Match: A0A8K1CH96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH96_PYTOL) HSP 1 Score: 49.7 bits (117), Expect = 1.710e-5 Identity = 20/41 (48.78%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 37 KGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESFLF 159
+G+ S ++VE G+VFGGF S+W++++ YYGTGE F+F
Sbjct: 235 QGKGASIIIVETCDGDVFGGFNTSSWTTSTSYYGTGECFVF 275 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41189.10605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig41189.10605.1 >prot_H-paniculata_contig41189.10605.1 ID=prot_H-paniculata_contig41189.10605.1|Name=mRNA_H-paniculata_contig41189.10605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp DGANWIQFFNRVKGEVPSYVVVENMQGEVFGGFAASAWSSTSKYYGTGESback to top mRNA from alignment at H-paniculata_contig41189:1026..1670- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig41189.10605.1 ID=mRNA_H-paniculata_contig41189.10605.1|Name=mRNA_H-paniculata_contig41189.10605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=645bp|location=Sequence derived from alignment at H-paniculata_contig41189:1026..1670- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig41189:1026..1670- >mRNA_H-paniculata_contig41189.10605.1 ID=mRNA_H-paniculata_contig41189.10605.1|Name=mRNA_H-paniculata_contig41189.10605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at H-paniculata_contig41189:1026..1670- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |