prot_H-paniculata_contig41.10558.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41.10558.1
Unique Nameprot_H-paniculata_contig41.10558.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length871
Homology
BLAST of mRNA_H-paniculata_contig41.10558.1 vs. uniprot
Match: D7G0C5_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.790e-34
Identity = 164/541 (30.31%), Postives = 229/541 (42.33%), Query Frame = 0
Query:  305 EQPEFVVLGLVGQNADRMLLLPTAVKREVTIGRSPAHSVVLEW-DRDGDSRAKKSLLLARTKKKPVLPNPLPALATALAWARQLGPGALQAEHL---LPTLPFPALAPPVAPTPNNVGSSNTNTSTLCTPGHKNGNIITKSTTATTASNEKGSVRSGSRDAAEPSPVSRFLHPENRNESLSVGAAWMLGHLVFGQQAGAARVESLMGGRKAPISRVSVAGSEATALGLLSCPGIGWNLDPADVVQTLSEAGDGVF--YTAAATSMSTGRSDEGKEGGSGAEAEAEAEEVGSAGREACAACDELVAVGLCTRSQDRGWLELVPEVELAFELILKVFVNNWSLDRISLAHTALGSRTTGPMTMGVLPRSIHSLTPEPISPTDLSKLSGGTSAGVVLQKNAESTKKGMVPHRQEPKQRLVGREQRLVGVGVGRLSEGVGVLCVKLRTWCIEVTRRFDSCEKDQYLLWKIIKRSENPSKGANAAEVWNGSMAGALALLGGXXXX------TSVNTSSNNCNWMACLSRGERILEPACVRLKEAVE 833
            +QP FV++G++  +  R LLLPT  +R   +G   + SV + W D  G SR   + +L RTK KP   NPLP LA  LAW R+L PGAL    L   L TL   AL  P         +   NT                                                       LS+GAAW+L HL+FG   G          R+    +VS++G+EA A+ LL CP IGW+  P +V+Q +SE G G+   Y+    +  T                    + G  G+    A DELV  G   + +    L L  ++E A EL+LK+F+ NW +DR   A  ALG   TGP+  G+ P  I SL             SG        QK   ST              + G ++R      GR+   VG LCV+L +WC +V R      +D  +L  +       +    +   W G MA A  LLGG           S+  +++   W+A LS+ ER+LE AC+RLK+A++
Sbjct:  124 DQPPFVMMGMLDDS--RALLLPTTRERREVMGSLSSASVPVTWTDSTGQSR---TAILTRTKAKPKPCNPLPMLANLLAWMRELPPGALPENRLRIRLETLL--ALQSPSKSVSRQSSTIGKNTXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLGAAWLLAHLMFGMDGGGKATGPFE--REILNGKVSLSGAEANAMPLLLCPLIGWSPRPREVIQAMSE-GAGILCAYSVELAAFET--------------------QTGICGK----AADELVHAGFARKVEFGEMLALDQKMEDACELVLKIFLCNWDVDREVRAQVALGLTKTGPVASGLCPPDIPSL------------FSG-------RQKWRSSTTA------------VRGGDER--SSCRGRMGGLVGDLCVRLHSWCHQVMR----AGRDLRVLLLLQVLKGETAGDLTSQREWTGPMAQAFGLLGGAEVSYHKRHRDSIGGTAS-AGWVASLSKEERLLEVACLRLKQAMK 583          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41.10558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0C5_ECTSI1.790e-3430.31Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41contigH-paniculata_contig41:3433..20056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41.10558.1mRNA_H-paniculata_contig41.10558.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41 3340..23719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41.10558.1 ID=prot_H-paniculata_contig41.10558.1|Name=mRNA_H-paniculata_contig41.10558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=871bp
MEQNRELPTASVLPKLANQQHNYPSRGDERSRQLRRQRARVMAEGSLELA
LEGETPTQHISKVAHAAHVDMSSFYDQQCLEACACCNGRHHNAQGCRTDL
GRPSCSRSADIWHDAGRGHKRPPGGFDLVVALRGAESTSSRRDDPESSAA
NITTATATSANASSDETRTTAAATATATTARASSSAARTANADATDGTNS
SSRETICSSGDLVGDIHDPSVAAKIHSKIVSTTSAVTVTAGACDMNTTRP
TQVGNLGLFLHPARAAVQSAGGHLENRSSSSLRSLAGEERRKVEVKTQSS
SGVSEQPEFVVLGLVGQNADRMLLLPTAVKREVTIGRSPAHSVVLEWDRD
GDSRAKKSLLLARTKKKPVLPNPLPALATALAWARQLGPGALQAEHLLPT
LPFPALAPPVAPTPNNVGSSNTNTSTLCTPGHKNGNIITKSTTATTASNE
KGSVRSGSRDAAEPSPVSRFLHPENRNESLSVGAAWMLGHLVFGQQAGAA
RVESLMGGRKAPISRVSVAGSEATALGLLSCPGIGWNLDPADVVQTLSEA
GDGVFYTAAATSMSTGRSDEGKEGGSGAEAEAEAEEVGSAGREACAACDE
LVAVGLCTRSQDRGWLELVPEVELAFELILKVFVNNWSLDRISLAHTALG
SRTTGPMTMGVLPRSIHSLTPEPISPTDLSKLSGGTSAGVVLQKNAESTK
KGMVPHRQEPKQRLVGREQRLVGVGVGRLSEGVGVLCVKLRTWCIEVTRR
FDSCEKDQYLLWKIIKRSENPSKGANAAEVWNGSMAGALALLGGGGGGTS
VNTSSNNCNWMACLSRGERILEPACVRLKEAVEKPKNLWDGCMASKKLGV
IGCVLYHHRKLDRKGNKRRS*
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