prot_H-paniculata_contig4086.10544.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4086.10544.1
Unique Nameprot_H-paniculata_contig4086.10544.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length243
Homology
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: D7FYP9_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP9_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 2.080e-134
Identity = 218/242 (90.08%), Postives = 225/242 (92.98%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFNKRGKGRRGNADGEREDTEAVVRSFKRQRMGGGGXXXXXTKGGRGRRR 242
            VE+ +KF+TPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVN+EIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPY CDE+TVLVLQERV EAQRMAAREMREADFNK+GK R G  DG  ED E VVRSFKRQRMGG  XXXXX    RG+RR
Sbjct:  608 VEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNMEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYVCDEETVLVLQERVGEAQRMAAREMREADFNKKGKHRGGGGDGG-EDAETVVRSFKRQRMGGXXXXXXXXXXXRGKRR 848          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: A0A7S2W3B8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3B8_9STRA)

HSP 1 Score: 322 bits (825), Expect = 2.130e-108
Identity = 164/215 (76.28%), Postives = 191/215 (88.84%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFNK-RGKGRRGNAD---GERED 211
            VE++HKF+TPKTLVQQYLFIPAK+KDCYLAYVLNEFAGQ+ +VF +TCN +QRVALLLRNLGF AVCLHGQM QPKRLGAL KFKSGQR++LIATDVASRGLDIPSVD+V+N +IP +GK+YIHRVGRTARAGRAGRS+AFVTQYDVEVYQR+EAL+GQKLP +  +E+TVL++ ERV+EAQR+AARE+RE    K +GK RRG A    GE ED
Sbjct:   51 VEVSHKFSTPKTLVQQYLFIPAKYKDCYLAYVLNEFAGQTILVFSATCNGSQRVALLLRNLGFDAVCLHGQMSQPKRLGALNKFKSGQRSILIATDVASRGLDIPSVDVVINFDIPGNGKEYIHRVGRTARAGRAGRSVAFVTQYDVEVYQRLEALLGQKLPSFPAEEETVLIMLERVSEAQRIAARELREILATKGKGKRRRGEASAVAGEAED 265          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: A0A7S2Y335_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y335_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.000e-106
Identity = 156/192 (81.25%), Postives = 178/192 (92.71%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREA 192
            VE++ KF+TP +LVQQYLFIPAK+KDCYLAYVLNEFAGQ+ +VFVSTCN AQRVALLLRNLGFQA+CLHGQM QPKRLGAL KFKSG R +L+ATDVASRGLDIPSVDLV+N +IPSHGKDYIHRVGRTARAGR+GRSIAFVTQYDVEVYQR+EA++G++LP Y C+ED VLV+ ERV+EAQR+A REMREA
Sbjct:  103 VEVSSKFSTPVSLVQQYLFIPAKYKDCYLAYVLNEFAGQTALVFVSTCNAAQRVALLLRNLGFQAICLHGQMSQPKRLGALNKFKSGARPILVATDVASRGLDIPSVDLVLNFDIPSHGKDYIHRVGRTARAGRSGRSIAFVTQYDVEVYQRLEAMLGKQLPAYPCEEDMVLVMLERVSEAQRLANREMREA 294          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: W7TSS5_9STRA (Dead deah box rna n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSS5_9STRA)

HSP 1 Score: 316 bits (810), Expect = 5.090e-103
Identity = 163/215 (75.81%), Postives = 187/215 (86.98%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFN--KRGKGRRGNADGEREDTE 213
            VE + KF TP+TLVQQYLFIPAK+KDCYLAY LNE AGQ+ +VFV+TCNNAQR+ALLLRNLGF A+CLHGQM QPKRLGAL KFKSGQR++LIATDVASRGLDIP+VDLV+N +IPSHGKDYIHRVGRTARAGRAGRSIA VTQYDVEVYQR+EAL+G KLP Y  DE+TVL+L ERV+EAQR+AARE+RE      K+G GR+   DGE ++ E
Sbjct:  238 VEASDKFTTPRTLVQQYLFIPAKYKDCYLAYALNEAAGQTILVFVATCNNAQRLALLLRNLGFGAICLHGQMTQPKRLGALHKFKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVTQYDVEVYQRLEALLGTKLPEYKTDEETVLILLERVSEAQRIAARELRELTLGGGKKG-GRKRGRDGEGDEDE 451          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: A0A7S3GTT3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTT3_9STRA)

HSP 1 Score: 308 bits (789), Expect = 2.260e-102
Identity = 153/209 (73.21%), Postives = 180/209 (86.12%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFN--KRGKGRRGNADG 207
            VE+++KF TPK LVQQYLFIPAK+KDCYLAY+L+EF GQS I+FV+TCNNA RV LLLRNLGF+AVCLHGQ+ Q KRLGAL KFK+GQRN+L+ATDVASRGLDIP+VD+V+N +IPSHGKDYIHRVGRTARAG++GRS++FVTQYDVE YQR+EALIGQKLP +  DE TVL+L ERV EAQR+A RE+RE   N  +  K  RG A G
Sbjct:   54 VEVSNKFQTPKQLVQQYLFIPAKYKDCYLAYLLDEFKGQSVIIFVATCNNALRVTLLLRNLGFEAVCLHGQLSQAKRLGALNKFKAGQRNILVATDVASRGLDIPNVDMVLNFDIPSHGKDYIHRVGRTARAGKSGRSVSFVTQYDVEAYQRLEALIGQKLPEFPADESTVLILLERVNEAQRLAVRELREMQANDPRNKKRNRGGAPG 262          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: A0A7S0SXP7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXP7_9STRA)

HSP 1 Score: 308 bits (789), Expect = 3.000e-100
Identity = 154/200 (77.00%), Postives = 174/200 (87.00%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFNKRGKG 200
            VE+++KF TPKTL QQYLFIPAK KDCYL+Y+L+EF GQSTIVFV+TCNNA RVALLLRNLGF AVCLHGQM Q KRLGAL KFKSGQRN+L+ATDVASRGLDIP+VDLV N +IPSHGKDYIHRVGRTARAG+AGRSIAFVTQYD+E YQR+E +I QKLP +  DE+TVL+L ERV EAQR+A +EMRE   N   KG
Sbjct:  221 VEVSNKFQTPKTLSQQYLFIPAKWKDCYLSYILDEFKGQSTIVFVATCNNALRVALLLRNLGFNAVCLHGQMNQAKRLGALNKFKSGQRNILVATDVASRGLDIPNVDLVCNYDIPSHGKDYIHRVGRTARAGKAGRSIAFVTQYDIEAYQRLETMIQQKLPEFKTDEETVLILLERVNEAQRLATKEMREMQENDPRKG 420          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: K3WTS8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTS8_GLOUD)

HSP 1 Score: 305 bits (782), Expect = 7.970e-99
Identity = 151/207 (72.95%), Postives = 176/207 (85.02%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFN-KRGKGRRGNAD 206
            VEITHKFATP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RN+L+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +++FVTQYDVE+YQR+E L+G+KL  Y C+EDTVLV+ ERV EAQRMA  EM+E+D   KRG+  RG AD
Sbjct:  230 VEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMTQPNRLGALNKFKAKSRNILVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGTAVSFVTQYDVELYQRIEHLLGKKLDTYPCEEDTVLVMSERVNEAQRMATIEMKESDTGGKRGRYTRGGAD 436          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: A0A812RT96_SYMMI (DDX47 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RT96_SYMMI)

HSP 1 Score: 304 bits (779), Expect = 1.690e-98
Identity = 154/211 (72.99%), Postives = 179/211 (84.83%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFNKRGK----GRRGNADG 207
            VE+++KF TPKTLVQQYLFIPAK KDCYLAYVL+EF GQSTI+FV+TC+NA RV ++LR LGF A+CLHGQ+ QPKRLGAL KFKSG RN+L+ATDVASRGLDIP+VD V+N +IPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVE YQR+E LIGQ+LP +  DE TVLVL ERV EAQR+A++++RE +    GK    GR  N DG
Sbjct:  237 VEVSNKFQTPKTLVQQYLFIPAKWKDCYLAYVLDEFKGQSTIIFVATCSNALRVTMVLRALGFGAICLHGQLSQPKRLGALNKFKSGLRNILVATDVASRGLDIPNVDFVLNFDIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEAYQRLETLIGQRLPEFPADEQTVLVLLERVTEAQRIASKDIREMESTAGGKKKKRGRGENDDG 447          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: A0A662XZC0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZC0_9STRA)

HSP 1 Score: 304 bits (778), Expect = 6.320e-98
Identity = 154/216 (71.30%), Postives = 177/216 (81.94%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFN-----KRGKGRRGNADGERED 211
            VEITHKFATP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +++FVTQYDVE+YQR+E L+G KL  Y C+EDTVLV+ ERV EAQRMA  EM+EA  N     KRG+  RG  D +R D
Sbjct:  247 VEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMPQPNRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAVSFVTQYDVELYQRIEHLLGAKLDSYPCEEDTVLVMSERVGEAQRMATIEMKEAAANGTGSFKRGRYSRGEGDEDRAD 462          
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Match: H3GTT0_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GTT0_PHYRM)

HSP 1 Score: 302 bits (773), Expect = 2.700e-97
Identity = 157/232 (67.67%), Postives = 183/232 (78.88%), Query Frame = 0
Query:    1 VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASRGLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVYQRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFN----KRGKGRRGNADGEREDTEAVVRSFKRQRMGGGG 228
            VEITHKFATP+TL Q YLFIPAK KDCYLAYVLNE AGQS ++F STCN  Q+V L+LRNLGFQA+CLHGQM QP RLGAL KFK+  RNVL+ TDVASRGLDIPSVD+V+N +IP+HGKDYIHRVGRTARAGRAG +I+FVTQYDVE+YQR+E L+G KL  Y+C+E+TVLV+ ERV EAQR+A  EM+EA  N    KRG+  R     E E+ E   +S  R   GG G
Sbjct:  231 VEITHKFATPETLKQHYLFIPAKFKDCYLAYVLNEVAGQSVLIFASTCNGTQKVTLMLRNLGFQAICLHGQMTQPNRLGALNKFKAKARNVLVCTDVASRGLDIPSVDVVINYDIPTHGKDYIHRVGRTARAGRAGVAISFVTQYDVELYQRIEHLLGTKLDAYSCEEETVLVMSERVNEAQRIATIEMKEAAANGTGTKRGRYSRDEEGDEEEEGEKRYKSAARVHNGGRG 462          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4086.10544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP9_ECTSI2.080e-13490.08DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S2W3B8_9STRA2.130e-10876.28Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2Y335_9STRA1.000e-10681.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7TSS5_9STRA5.090e-10375.81Dead deah box rna n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A7S3GTT3_9STRA2.260e-10273.21Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0SXP7_9STRA3.000e-10077.00Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
K3WTS8_GLOUD7.970e-9972.95Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A812RT96_SYMMI1.690e-9872.99DDX47 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A662XZC0_9STRA6.320e-9871.30Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
H3GTT0_PHYRM2.700e-9767.67Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..191
NoneNo IPR availableGENE3D3.40.50.300coord: 11..221
e-value: 9.0E-48
score: 164.9
NoneNo IPR availablePANTHERPTHR24031:SF676ATP-DEPENDENT RNA HELICASE DDX49-RELATEDcoord: 38..203
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 38..203
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 52..133
e-value: 2.9E-29
score: 113.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 30..133
e-value: 1.2E-28
score: 99.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 12..178
score: 21.359
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4086contigH-paniculata_contig4086:10575..16435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4086.10544.1mRNA_H-paniculata_contig4086.10544.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4086 10575..16435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4086.10544.1 ID=prot_H-paniculata_contig4086.10544.1|Name=mRNA_H-paniculata_contig4086.10544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
VEITHKFATPKTLVQQYLFIPAKHKDCYLAYVLNEFAGQSTIVFVSTCNN
AQRVALLLRNLGFQAVCLHGQMGQPKRLGALGKFKSGQRNVLIATDVASR
GLDIPSVDLVVNLEIPSHGKDYIHRVGRTARAGRAGRSIAFVTQYDVEVY
QRMEALIGQKLPPYTCDEDTVLVLQERVAEAQRMAAREMREADFNKRGKG
RRGNADGEREDTEAVVRSFKRQRMGGGGGRGGGTKGGRGRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase