mRNA_H-paniculata_contig4081.10538.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4081.10538.1
Unique NamemRNA_H-paniculata_contig4081.10538.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A6H5KUR7_9PHAE (THUMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR7_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 2.160e-58
Identity = 129/303 (42.57%), Postives = 168/303 (55.45%), Query Frame = 1 
Query:  106 WYIALCLGGLQSTVKAEVERQITAHGRWHADVQVFQEDFQGADTLIE-----------GVHPG---DAGCGKLIVATDAPPNILKNITCIQGLFALIAQAASLDIVVATPGGPVPSRLDGTIMKSPLACSAAERPSGEIQEDDP--AALAIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNVDNASG--------VGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAKRCSHGEL 942
            WY+ LCLGGLQ+ VKAEV+R + A  R   DV VF+EDF     ++             + PG   +A  G    A D     L+ +T   GLFAL+A +ASLDI          +R+     +S    S  +  SG    +DP     A+ R+ES +T SP WPAA+++W+ F   +       +    + SG        +G  G+ +     +D  R     DV  +KFRASVVRDG+H F+S+EASPRLGGAV +VN  WTVDLK YDVEVV FILERGVAVGL+L GDR KRCSHG +
Sbjct:   20 WYLLLCLGGLQTVVKAEVKRHLEA-SRQEGDVHVFEEDFGATHYVMTKTRSARPSRRGSLRPGGLREAAGGDRCSARDPEIASLRPVT---GLFALVAHSASLDI----------TRIPRQAAESTSTSSPQKIASGAAPAEDPNTTEAALARLESLVTDSPLWPAAINVWKSFKVSQARSTEAAAAGAGDVSGTEPRDCPALGEPGQEE-----EDAPRAVGDIDVAGIKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRV 303
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: D7FYS5_ECTSI (THUMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS5_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.590e-37
Identity = 85/155 (54.84%), Postives = 104/155 (67.10%), Query Frame = 1 
Query:  505 AIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNVDNASGVGGIGKND-------GAGGSD--DNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAKRCSHGEL 942
            A+ R+ES +T SP WPAA+++W+RF   +      +ST    A+G GG+   +       G  G +  D  R     DV  LKFRASVVRDG+H F+S+EASPRLGGAV +VN  WTVDLK YDVEVV FILERGVAVGL+L GDR KRCSHG +
Sbjct:   52 ALARLESLVTDSPLWPAAINVWKRFKVSQ-----ARSTQAA-AAGAGGVSGTEPRDCPALGRPGQEMEDAPRPVGDIDVAGLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRV 200
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A7M5XFR1_9CNID (THUMP domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XFR1_9CNID)

HSP 1 Score: 77.4 bits (189), Expect = 6.090e-13
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 1 
Query:  517 IESEITGSPR---WPAALDLWRRFMEFEDNDN-----SRQSTNVDNASGVGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLS 906
            I +E+T  P    W  AL+ W+RF  F+ N+      SR+    D      G  KND    + D   +T   + E L+FRA+  R G H F+SME++  LGG V   + HW VDLK +D+EVV +I++  ++VG+ L+
Sbjct:   80 IFAELTKLPAEIDWTKALETWKRFRLFKQNNGGLDPVSRKRKQPD------GESKNDL---NIDYNTITPLTERENLRFRATATRTGTHVFSSMESACHLGGGV-NDHFHWKVDLKNFDLEVVVYIVDNFISVGIQLT 207
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A024TEQ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEQ6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.950e-7
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 1 
Query:  721 LKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLS 906
            L+FRAS VRDG+HA++S   +  +G AVL     WTV L +++VEVV  +L   V +GLSL+
Sbjct:  126 LRFRASCVRDGKHAYSSETIAGEVGAAVLKRQTGWTVSLVDFNVEVVALVLHHHVVLGLSLA 187
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: T0S6C0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S6C0_SAPDV)

HSP 1 Score: 61.2 bits (147), Expect = 6.830e-7
Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 1 
Query:  505 AIGRIESEITGSPRWPAALDLWRRFMEF--EDNDNSRQSTNVDNASGVGGIGKN-DGAGGS------DDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 915
            A+G+I  E T SP    +L   + F+ F  E ND        D+ +G+  IGK  + A  S        +       + E+ +FRAS VRDG+HA+NS + +  +GGA+L  +  W V L E+ +EVV F+L   V  G+SL+  R
Sbjct:   50 AVGKIVLETTSSPGEVKSLCSIQAFLAFVVEAND-----VVTDDVAGMVQIGKLVETADWSAPLSLWQAHAPTAPTSENESFRFRASCVRDGKHAYNSEKIAGEVGGALLE-HFGWKVSLTEFHMEVVCFVLHNHVVCGVSLADPR 189
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A067CVC0_SAPPC (THUMP domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CVC0_SAPPC)

HSP 1 Score: 61.2 bits (147), Expect = 8.150e-7
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1 
Query:  697 TVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 915
            T     +T +FRAS VRDG+HA+NS + +  +GGA+L  +  W V L E+ +EVV F+L   V  G+SL+  R
Sbjct:   58 TTSSPGDTFRFRASCVRDGKHAYNSEKIAGEVGGALLE-HFGWKVSLTEFHMEVVCFVLHNHVVCGVSLADPR 129
[Close]
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A1V9ZVN7_9STRA (Replication factor C subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVN7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 6.440e-6
Identity = 39/131 (29.77%), Postives = 55/131 (41.98%), Query Frame = 1 
Query:  523 SEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNVDNASGVGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 915
            S+I  S  W AAL+LW   M                                      +V     + +FRAS VRDG+HA+NS + +  +GG +      W V L E+ +EVV F+L   +  GLSL+  R
Sbjct:  414 SQIVASADWKAALELWAAHMAS------------------------------------SVPTSDPSFRFRASCVRDGKHAYNSEKIAGEVGGTIFE-QFGWKVSLTEFHMEVVCFVLHNHLVCGLSLADPR 507
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BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A1V9YB00_9STRA (Replication factor C subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB00_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.030e-5
Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 1 
Query:  505 AIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNV--DNASGVGGIGKN-DGAGGSDD------NERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 915
            A+G+I  E T  P    +L   + F+ +       ++ NV  D+A G+  IGK  +GA  +        +    +       +FRAS VRDG+HA+NS + +  +GG +L  +  W V L E+D+EVV  +L   +  GLSL+  R
Sbjct:  368 AVGKIVLETTSLPATVKSLCSVQAFLAY-----IVEADNVITDDAKGIDQIGKIVEGADWTAPLALWAAHAPTAMATTDPAFRFRASCVRDGKHAYNSEKIAGEVGGTLLD-HFGWKVSLTEFDMEVVCVVLHNFLVCGLSLADPR 507
[Close]
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A8K1FNN1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNN1_PYTOL)

HSP 1 Score: 56.6 bits (135), Expect = 2.370e-5
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1 
Query:  727 FRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLS 906
            FR S VRDGRHAF S+E +  +GGAV      W VDL + D+EVV  +    + VGLSL+
Sbjct:  158 FRGSCVRDGRHAFKSVEVAAEIGGAVAE-KFGWKVDLTQCDLEVVCLVFHTHMIVGLSLA 216
[Close]
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A0M0J654_9EUKA (Ankyrin repeat protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J654_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 2.660e-5
Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 1 
Query:  715 ETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAKRCS 930
            + L FRA+ VRDG HAF S++ +  +G AV  +     VDL  +D+EVV F+L+  + VG++L   ++ +C+
Sbjct:  435 DALSFRANAVRDGMHAFKSVDLAQAIGAAV-HLQRRLRVDLTGFDLEVVAFLLQGELLVGINLISGKSMKCN 505
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KUR7_9PHAE2.160e-5842.57THUMP domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FYS5_ECTSI2.590e-3754.84THUMP domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7M5XFR1_9CNID6.090e-1336.96THUMP domain-containing protein n=1 Tax=Clytia hem... [more]
A0A024TEQ6_9STRA3.950e-748.39Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0S6C0_SAPDV6.830e-734.93Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CVC0_SAPPC8.150e-743.84THUMP domain-containing protein n=1 Tax=Saprolegni... [more]
A0A1V9ZVN7_9STRA6.440e-629.77Replication factor C subunit 2 n=1 Tax=Thraustothe... [more]
A0A1V9YB00_9STRA2.030e-532.19Replication factor C subunit 2 n=1 Tax=Achlya hypo... [more]
A0A8K1FNN1_PYTOL2.370e-550.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0M0J654_9EUKA2.660e-538.89Ankyrin repeat protein n=1 Tax=Chrysochromulina to... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4081contigH-paniculata_contig4081:12093..16449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.7
Seed ortholog evalue4.5e-33
Seed eggNOG ortholog2880.D7FYS5
Preferred nameTHUMPD3
Hectar predicted targeting categoryother localisation
GOsGO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
EggNOG free text desc.tRNA (guanine) methyltransferase activity
EggNOG OGs2QSE5@2759,COG0116@1
Ec32 ortholog descriptionPutative RNA methylase domain
Ec32 orthologEc-19_002340.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size942
Cds size921
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4081.10538.1prot_H-paniculata_contig4081.10538.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4081 12114..16449 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930248.37927-UTR-H-paniculata_contig4081:12092..121131622930248.37927-UTR-H-paniculata_contig4081:12092..12113Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4081 12093..12113 +
1691481209.3179772-UTR-H-paniculata_contig4081:12092..121131691481209.3179772-UTR-H-paniculata_contig4081:12092..12113Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4081 12093..12113 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930248.3926952-CDS-H-paniculata_contig4081:12113..121991622930248.3926952-CDS-H-paniculata_contig4081:12113..12199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 12114..12199 +
1691481209.3280616-CDS-H-paniculata_contig4081:12113..121991691481209.3280616-CDS-H-paniculata_contig4081:12113..12199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 12114..12199 +
1622930248.4068725-CDS-H-paniculata_contig4081:12512..126311622930248.4068725-CDS-H-paniculata_contig4081:12512..12631Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 12513..12631 +
1691481209.3387494-CDS-H-paniculata_contig4081:12512..126311691481209.3387494-CDS-H-paniculata_contig4081:12512..12631Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 12513..12631 +
1622930248.4254367-CDS-H-paniculata_contig4081:14902..150121622930248.4254367-CDS-H-paniculata_contig4081:14902..15012Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 14903..15012 +
1691481209.3495984-CDS-H-paniculata_contig4081:14902..150121691481209.3495984-CDS-H-paniculata_contig4081:14902..15012Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 14903..15012 +
1622930248.4419603-CDS-H-paniculata_contig4081:15313..158171622930248.4419603-CDS-H-paniculata_contig4081:15313..15817Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 15314..15817 +
1691481209.3573928-CDS-H-paniculata_contig4081:15313..158171691481209.3573928-CDS-H-paniculata_contig4081:15313..15817Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 15314..15817 +
1622930248.4639587-CDS-H-paniculata_contig4081:16347..164491622930248.4639587-CDS-H-paniculata_contig4081:16347..16449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 16348..16449 +
1691481209.3663957-CDS-H-paniculata_contig4081:16347..164491691481209.3663957-CDS-H-paniculata_contig4081:16347..16449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 16348..16449 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4081.10538.1

>prot_H-paniculata_contig4081.10538.1 ID=prot_H-paniculata_contig4081.10538.1|Name=mRNA_H-paniculata_contig4081.10538.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
MMNDNAIYSSSHTTVVSSGHKSDHERLGWYIALCLGGLQSTVKAEVERQI
TAHGRWHADVQVFQEDFQGADTLIEGVHPGDAGCGKLIVATDAPPNILKN
ITCIQGLFALIAQAASLDIVVATPGGPVPSRLDGTIMKSPLACSAAERPS
GEIQEDDPAALAIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTN
VDNASGVGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNS
MEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAK
RCSHGEL
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mRNA from alignment at H-paniculata_contig4081:12093..16449+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4081.10538.1 ID=mRNA_H-paniculata_contig4081.10538.1|Name=mRNA_H-paniculata_contig4081.10538.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4357bp|location=Sequence derived from alignment at H-paniculata_contig4081:12093..16449+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGAAGGCTCACTTGGGAGACATGATGAATGATAATGCTATCTACTCGTC
GTCCCACACTACCGTGGTGTCAAGCGGTCATAAGTCTGATCATGAGCGTT
TGGGTTGGTGAGTCTGTGTTTGCGGAATTTGCTGTCGGCGTAACTCAATA
TTGGCAATCCGTACTGGAAACTAACTGATGATAGTGCCTATCCTGCACGC
GCCTGCCAGTCTAGATGAATCACCAGTTTGCCAGATGACAGACGATGTAC
TGCATTGCTACACTTTTGTATGCACAAGACGATCTTAGTTTATCTTTGTT
GGAGTCTACCCACCCTGGAGCGACACATGCATGGATGTTGTCGAATGCTT
GACGATTAATTTTGGTAACGGACGAACAGCTTGCTGGCTACAATACTGAC
TACCCGTACGTCCATCTCAGGTACATAGCATTGTGTCTAGGCGGTTTGCA
ATCTACAGTCAAGGCCGAAGTGGAGCGTCAGATTACAGCTCATGGACGGT
GGCATGCTGATGTTCAAGTCTTCCAAGAAGACTTCCAAGGTCGGTTCACC
TGGCAGCACAATGTCAGACAGGCTGTGCAAAAAGTACCAGACACATGTGG
AAATGCTACTTCGGTACAAACAACATGCGGAATGCGGAGTATTTCAAACC
TGAACTGCTGTTAGCACAGTGGTGATCGCACCGTTCAGGTGAGCAGTGGG
AAAGTGGAAGTACAGTCAGCACTCAGACGGTGAGGACGACAATACTGTAC
ATAGTACATTCTCTAACCCGCCGAACCTGCCGCAGTGACATATACTTTGG
CTTACTGGAGAGTCTGTAGCGCTACGATCTGCGGCTGCCAAACTCAATCC
GTTCGAATCACCTCGAGACAGTTTGGCCGAGTCTTACTTATCCAGAGCGA
AAAATCGATTCTCGCCAAGATGTCTTTTACCAAATTAATCGGGCAAGAAT
CCATTTTTGTGTCCACTCGAAAGCGGACTTGGTTCAGGAGATTTCCAGAA
TGGCACCTACTGTTGCCAAATGGTTGAGACAAGTCAGAAAAAAGACTGAG
AAACAGTATCTGGAGAGAGTCTCTTAAGCAACACGCAGATAACACGCACG
GGAATACAGAGTACGCCCACAGTAGTGGGCGCGATAGGCGTTACTTAGCT
GCACGCACTAGGCTTGGTATGGCGGAAATCCAACCTGTATTGGGGAAGGT
ACAGTTGTTCATGCGCAGTTGCAATCAGCAAAAATTGCCCCTTTCGACCG
TGTCTGTCTTGTCCAGTTGCCCACGAAACATACCCGTCCTTGTCCATTTT
GTTCGTGATTGGTGCTGTACAGACGAGCTGTTTGACGAATAAATGTAGTA
CACGTATGAACTTGTACTTTGGTAGGACAAGAAATAATACTATATGTGGC
ATAACTTGGTAGGAACTTCATTTCGAGGGCATTATAACGAGATCGTTTCG
TACTAGGGATTTTTCTATCCGTCTTCCAGTATTGGAGAGAGAGACCCACA
AGCTGACTTCCAAATCAGACCAAGCGCAAGGCTCCACTCTTGAGTAGTTA
TGGCAAGAGTGACACAGTCGCGTGGGCTACTGTAAAGCGGGATAATAGAA
GACAACTAAAGGAAGATATAAGTTATTTGTTTCTGATACATACCTGTGAC
TTGCGGGTAGTAAGGGGGAGCCGTGCTAGCGTTCATCGGAGAATGGAACA
CATTTTTGAACTCATACTATCCAAAACAGGTACGCAGGACTCAACGGATA
AAGAGCTACGGCCCGGACTACGTTATACCCGACAAAGTGATGGTTACGAT
CACTGTGCTACGTTCCTCTGTCGCACGTTGTAATTCACCGCATTTAGTTG
CCTTTGGCCGCTTTTGGTTGACACGAAGGGCACCCGTGAACGGCTCTCGC
AGATATCCACCGCATTTAGGCTGCTATTTTATTCCCCTACAAAATAGATT
GTGTGCCAACCAATAACCAAATAGGATTTTAAAAGTATTTTTCGCTTTCC
CGGCAGATTCCTGTAGAATCGTTTATTTGGCGTTGTAAAAGCGAGACCAC
CAGCGACCAGTGTTCGAACCAGTTTTTCAACCAATCACAGGCCCTCCAGT
CAGAACTGATTTCATGGGAATCTACCCTGAGTCGTGGTTTTTCTCTGGAT
AAGACTCAGCGTTAGAACCGTTCTTAAAAAGCGAGCGTGGTTTTCCATAT
TCTGTTTTCCGAATTTATGGATTCAGACTTCCTCTATGCCATAGGGGTAG
TCGGTGGAGTTTGGTAGACCATATCTTCAGACCTAGACCATTTCAAAGGC
TGCAAATGGAATCCCCGGAAAGCAAAATCTGATACACTCATATGTCCTTT
TCCACAGTTTATTCCGAGTTATGTATCAAGATCATGGCCGCTCAAGATTG
GGCTAACTTTGACCGTTTTGTCGTTTTTTTCTGATTTTTAATGTTTTTCT
GTTGGAAATATCCAGAAAAGGCGCAAAATACGGCCTTTTTTCGGCCGATA
TATTTTTTTGTGCCGCACGTGCACGCAATGGGCTTTTATAATTACCCTGA
ATTTTTGGGGATCAACCCCAGAAACATGTAGAACTCTAACTCAAAAAGTA
GTGATGAAATCGGAGATGTTCGAGTGCCCCTGCGAAGAAGTTCGACTTTA
CTTACAGCACAGAGTAGAGATCACTTTATATACCCTCCTTTCTAAAATCG
GATAACAGAAAATCAGGCTCGCCCATTCAACTCGTCCTGTAAAAGCTGTT
GTTATCACAAGTGGTCTTAGTGATCCGGTGTCCACCCTTCCTTCGTATGC
CGTACGGCAGGAGCGGATACCCTTATAGAAGGCGTACACCCTGGTGATGC
AGGATGTGGCAAACTCATCGTGGCCACAGACGCACCGCCAAATATTCTGA
AAAACATCACGTGCATACAGGTGTGACTTCTCTAAAGTCGTAATGGTACA
GGCTTGCATCGACGAAGTTGAGCTTACGCGGAAACGCAATCACGAAGAAC
CATGCGTTGCTTCGGTTCTTGCACTGTCATCGACGGCACGATGCCCGCGT
TGCCGCAGCTACGCTGCGCGTGCTCAGTGTGTGGGCCCTACGAATGCCAA
TGCCCAGCCCCGTACTTCCACACCTGTACGATGCATACAAGCACAACGCC
GTAGCAAACTATACCCTGATCTTTGCGTCCATCTGTCACGTGTTTCTGCA
TCGTACGTGCGTGCCCCGCAGGGTTTGTTTGCCTTAATCGCGCAGGCTGC
GAGCCTAGATATTGTTGTTGCCACCCCAGGAGGTCCAGTTCCTAGTAGAC
TTGATGGTACAATCATGAAATCGCCCCTAGCTTGCAGTGCCGCGGAGAGA
CCTTCAGGTGAAATCCAAGAGGATGATCCCGCTGCCCTTGCAATTGGTCG
CATCGAGTCGGAGATTACTGGATCGCCGAGGTGGCCTGCTGCGTTAGACC
TGTGGAGACGGTTCATGGAATTCGAAGATAACGATAACAGTAGACAGTCA
ACGAACGTTGACAATGCGTCGGGAGTTGGTGGCATTGGCAAGAACGATGG
GGCGGGTGGGAGTGATGACAACGAGCGTGTTACAGTAAAACGGGATGTGG
AGACGCTCAAGTTTAGAGCATCCGTCGTGCGTGACGGACGACATGCGTTC
AACTCCATGGAAGCTTCGCCGAGGCTTGGCGGCGCGGTGCTGACTGTTAA
TCCGCACTGGACCGTGGATCTGAAGGTAGGGTCTCTGGGAAAGGTAAAAC
ACGCATAGAGCTACATTTGAATGTGTCTTTCACGTGTCGTGTCCACTTCG
GTGCATTTCTGCGCGAGTTGACAGTCGCTGTTGGACGGCTTCCATCCAGT
GGACCGCAGTTCGGTCAAGCATGCCAGGAACTGAAGAAACGAGAGAGGTC
ATGTACGTCTCAGCTGCGGTTCATTTCGCGGATGGAGTGGAGTGGAGAGG
GTGGATATGATTCACCTCAGGGCTCAAGCTTAGATGGTGTGCATGCTATG
CACTCGCCATAGAGCCCAGGAGGATACCAATTGCTTCGTTTCCTTCGAGT
GACGGACCATACGCAAGTCGTAATACTCCACGATGGGAGAATCCCCTGTT
GTGGACCATGATGGTATCGCCCTCGTGGGTTTTATACATTGTACAATGTA
TCAGCCCTGTCGGTATATTGACCTGCCAGCCTCAGCACACACTCTACCGG
GTTTAATCACTGATCGTTCTCCCCGCCGTCAATCGACGGGTGATATAATC
CTCAGGAGTATGACGTAGAAGTGGTGACGTTTATTCTGGAGAGGGGCGTG
GCTGTGGGGCTTTCGCTAAGCGGAGACCGAGCCAAGCGCTGCTCCCACGG
TGAGCTA
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Coding sequence (CDS) from alignment at H-paniculata_contig4081:12093..16449+

>mRNA_H-paniculata_contig4081.10538.1 ID=mRNA_H-paniculata_contig4081.10538.1|Name=mRNA_H-paniculata_contig4081.10538.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig4081:12093..16449+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGAATGATAATGCTATCTACTCGTCGTCCCACACTACCGTGGTGTC
AAGCGGTCATAAGTCTGATCATGAGCGTTTGGGTTGATGATGAATGATAA
TGCTATCTACTCGTCGTCCCACACTACCGTGGTGTCAAGCGGTCATAAGT
CTGATCATGAGCGTTTGGGTTGGTACATAGCATTGTGTCTAGGCGGTTTG
CAATCTACAGTCAAGGCCGAAGTGGAGCGTCAGATTACAGCTCATGGACG
GTGGCATGCTGATGTTCAAGTCTTCCAAGAAGACTTCCAAGGTACATAGC
ATTGTGTCTAGGCGGTTTGCAATCTACAGTCAAGGCCGAAGTGGAGCGTC
AGATTACAGCTCATGGACGGTGGCATGCTGATGTTCAAGTCTTCCAAGAA
GACTTCCAAGGAGCGGATACCCTTATAGAAGGCGTACACCCTGGTGATGC
AGGATGTGGCAAACTCATCGTGGCCACAGACGCACCGCCAAATATTCTGA
AAAACATCACGTGCATACAGGAGCGGATACCCTTATAGAAGGCGTACACC
CTGGTGATGCAGGATGTGGCAAACTCATCGTGGCCACAGACGCACCGCCA
AATATTCTGAAAAACATCACGTGCATACAGGGTTTGTTTGCCTTAATCGC
GCAGGCTGCGAGCCTAGATATTGTTGTTGCCACCCCAGGAGGTCCAGTTC
CTAGTAGACTTGATGGTACAATCATGAAATCGCCCCTAGCTTGCAGTGCC
GCGGAGAGACCTTCAGGTGAAATCCAAGAGGATGATCCCGCTGCCCTTGC
AATTGGTCGCATCGAGTCGGAGATTACTGGATCGCCGAGGTGGCCTGCTG
CGTTAGACCTGTGGAGACGGTTCATGGAATTCGAAGATAACGATAACAGT
AGACAGTCAACGAACGTTGACAATGCGTCGGGAGTTGGTGGCATTGGCAA
GAACGATGGGGCGGGTGGGAGTGATGACAACGAGCGTGTTACAGTAAAAC
GGGATGTGGAGACGCTCAAGTTTAGAGCATCCGTCGTGCGTGACGGACGA
CATGCGTTCAACTCCATGGAAGCTTCGCCGAGGCTTGGCGGCGCGGTGCT
GACTGTTAATCCGCACTGGACCGTGGATCTGAAGGGTTTGTTTGCCTTAA
TCGCGCAGGCTGCGAGCCTAGATATTGTTGTTGCCACCCCAGGAGGTCCA
GTTCCTAGTAGACTTGATGGTACAATCATGAAATCGCCCCTAGCTTGCAG
TGCCGCGGAGAGACCTTCAGGTGAAATCCAAGAGGATGATCCCGCTGCCC
TTGCAATTGGTCGCATCGAGTCGGAGATTACTGGATCGCCGAGGTGGCCT
GCTGCGTTAGACCTGTGGAGACGGTTCATGGAATTCGAAGATAACGATAA
CAGTAGACAGTCAACGAACGTTGACAATGCGTCGGGAGTTGGTGGCATTG
GCAAGAACGATGGGGCGGGTGGGAGTGATGACAACGAGCGTGTTACAGTA
AAACGGGATGTGGAGACGCTCAAGTTTAGAGCATCCGTCGTGCGTGACGG
ACGACATGCGTTCAACTCCATGGAAGCTTCGCCGAGGCTTGGCGGCGCGG
TGCTGACTGTTAATCCGCACTGGACCGTGGATCTGAAGGAGTATGACGTA
GAAGTGGTGACGTTTATTCTGGAGAGGGGCGTGGCTGTGGGGCTTTCGCT
AAGCGGAGACCGAGCCAAGCGCTGCTCCCACGGTGAGCTAGAGTATGACG
TAGAAGTGGTGACGTTTATTCTGGAGAGGGGCGTGGCTGTGGGGCTTTCG
CTAAGCGGAGACCGAGCCAAGCGCTGCTCCCACGGTGAGCTA
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