prot_H-paniculata_contig4081.10538.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4081.10538.1
Unique Nameprot_H-paniculata_contig4081.10538.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length307
Homology
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A6H5KUR7_9PHAE (THUMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR7_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.730e-58
Identity = 129/303 (42.57%), Postives = 168/303 (55.45%), Query Frame = 0
Query:   29 WYIALCLGGLQSTVKAEVERQITAHGRWHADVQVFQEDFQGADTLIE-----------GVHPG---DAGCGKLIVATDAPPNILKNITCIQGLFALIAQAASLDIVVATPGGPVPSRLDGTIMKSPLACSAAERPSGEIQEDDP--AALAIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNVDNASG--------VGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAKRCSHGEL 307
            WY+ LCLGGLQ+ VKAEV+R + A  R   DV VF+EDF     ++             + PG   +A  G    A D     L+ +T   GLFAL+A +ASLDI          +R+     +S    S  +  SG    +DP     A+ R+ES +T SP WPAA+++W+ F   +       +    + SG        +G  G+ +     +D  R     DV  +KFRASVVRDG+H F+S+EASPRLGGAV +VN  WTVDLK YDVEVV FILERGVAVGL+L GDR KRCSHG +
Sbjct:   20 WYLLLCLGGLQTVVKAEVKRHLEA-SRQEGDVHVFEEDFGATHYVMTKTRSARPSRRGSLRPGGLREAAGGDRCSARDPEIASLRPVT---GLFALVAHSASLDI----------TRIPRQAAESTSTSSPQKIASGAAPAEDPNTTEAALARLESLVTDSPLWPAAINVWKSFKVSQARSTEAAAAGAGDVSGTEPRDCPALGEPGQEE-----EDAPRAVGDIDVAGIKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRV 303          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: D7FYS5_ECTSI (THUMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS5_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.140e-37
Identity = 85/155 (54.84%), Postives = 104/155 (67.10%), Query Frame = 0
Query:  162 AIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNVDNASGVGGIGKND-------GAGGSD--DNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAKRCSHGEL 307
            A+ R+ES +T SP WPAA+++W+RF   +      +ST    A+G GG+   +       G  G +  D  R     DV  LKFRASVVRDG+H F+S+EASPRLGGAV +VN  WTVDLK YDVEVV FILERGVAVGL+L GDR KRCSHG +
Sbjct:   52 ALARLESLVTDSPLWPAAINVWKRFKVSQ-----ARSTQAA-AAGAGGVSGTEPRDCPALGRPGQEMEDAPRPVGDIDVAGLKFRASVVRDGQHPFSSVEASPRLGGAVWSVNRGWTVDLKGYDVEVVAFILERGVAVGLALDGDRTKRCSHGRV 200          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A7M5XFR1_9CNID (THUMP domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XFR1_9CNID)

HSP 1 Score: 77.4 bits (189), Expect = 5.560e-13
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 0
Query:  166 IESEITGSPR---WPAALDLWRRFMEFEDNDN-----SRQSTNVDNASGVGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLS 295
            I +E+T  P    W  AL+ W+RF  F+ N+      SR+    D      G  KND    + D   +T   + E L+FRA+  R G H F+SME++  LGG V   + HW VDLK +D+EVV +I++  ++VG+ L+
Sbjct:   80 IFAELTKLPAEIDWTKALETWKRFRLFKQNNGGLDPVSRKRKQPD------GESKNDL---NIDYNTITPLTERENLRFRATATRTGTHVFSSMESACHLGGGV-NDHFHWKVDLKNFDLEVVVYIVDNFISVGIQLT 207          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A024TEQ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEQ6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.680e-7
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0
Query:  234 LKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLS 295
            L+FRAS VRDG+HA++S   +  +G AVL     WTV L +++VEVV  +L   V +GLSL+
Sbjct:  126 LRFRASCVRDGKHAYSSETIAGEVGAAVLKRQTGWTVSLVDFNVEVVALVLHHHVVLGLSLA 187          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: T0S6C0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S6C0_SAPDV)

HSP 1 Score: 61.2 bits (147), Expect = 6.380e-7
Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 0
Query:  162 AIGRIESEITGSPRWPAALDLWRRFMEF--EDNDNSRQSTNVDNASGVGGIGKN-DGAGGS------DDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 298
            A+G+I  E T SP    +L   + F+ F  E ND        D+ +G+  IGK  + A  S        +       + E+ +FRAS VRDG+HA+NS + +  +GGA+L  +  W V L E+ +EVV F+L   V  G+SL+  R
Sbjct:   50 AVGKIVLETTSSPGEVKSLCSIQAFLAFVVEAND-----VVTDDVAGMVQIGKLVETADWSAPLSLWQAHAPTAPTSENESFRFRASCVRDGKHAYNSEKIAGEVGGALLE-HFGWKVSLTEFHMEVVCFVLHNHVVCGVSLADPR 189          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A067CVC0_SAPPC (THUMP domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CVC0_SAPPC)

HSP 1 Score: 61.2 bits (147), Expect = 7.580e-7
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  226 TVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 298
            T     +T +FRAS VRDG+HA+NS + +  +GGA+L  +  W V L E+ +EVV F+L   V  G+SL+  R
Sbjct:   58 TTSSPGDTFRFRASCVRDGKHAYNSEKIAGEVGGALLE-HFGWKVSLTEFHMEVVCFVLHNHVVCGVSLADPR 129          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A1V9ZVN7_9STRA (Replication factor C subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVN7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.980e-6
Identity = 39/131 (29.77%), Postives = 55/131 (41.98%), Query Frame = 0
Query:  168 SEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNVDNASGVGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 298
            S+I  S  W AAL+LW   M                                      +V     + +FRAS VRDG+HA+NS + +  +GG +      W V L E+ +EVV F+L   +  GLSL+  R
Sbjct:  414 SQIVASADWKAALELWAAHMAS------------------------------------SVPTSDPSFRFRASCVRDGKHAYNSEKIAGEVGGTIFE-QFGWKVSLTEFHMEVVCFVLHNHLVCGLSLADPR 507          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A1V9YB00_9STRA (Replication factor C subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB00_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.890e-5
Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 0
Query:  162 AIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTNV--DNASGVGGIGKN-DGAGGSDD------NERVTVKRDVETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDR 298
            A+G+I  E T  P    +L   + F+ +       ++ NV  D+A G+  IGK  +GA  +        +    +       +FRAS VRDG+HA+NS + +  +GG +L  +  W V L E+D+EVV  +L   +  GLSL+  R
Sbjct:  368 AVGKIVLETTSLPATVKSLCSVQAFLAY-----IVEADNVITDDAKGIDQIGKIVEGADWTAPLALWAAHAPTAMATTDPAFRFRASCVRDGKHAYNSEKIAGEVGGTLLD-HFGWKVSLTEFDMEVVCVVLHNFLVCGLSLADPR 507          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A8K1FNN1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNN1_PYTOL)

HSP 1 Score: 56.6 bits (135), Expect = 2.220e-5
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:  236 FRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLS 295
            FR S VRDGRHAF S+E +  +GGAV      W VDL + D+EVV  +    + VGLSL+
Sbjct:  158 FRGSCVRDGRHAFKSVEVAAEIGGAVAE-KFGWKVDLTQCDLEVVCLVFHTHMIVGLSLA 216          
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Match: A0A0M0J654_9EUKA (Ankyrin repeat protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J654_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 2.500e-5
Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0
Query:  232 ETLKFRASVVRDGRHAFNSMEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAKRCS 303
            + L FRA+ VRDG HAF S++ +  +G AV  +     VDL  +D+EVV F+L+  + VG++L   ++ +C+
Sbjct:  435 DALSFRANAVRDGMHAFKSVDLAQAIGAAV-HLQRRLRVDLTGFDLEVVAFLLQGELLVGINLISGKSMKCN 505          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4081.10538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KUR7_9PHAE1.730e-5842.57THUMP domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FYS5_ECTSI2.140e-3754.84THUMP domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7M5XFR1_9CNID5.560e-1336.96THUMP domain-containing protein n=1 Tax=Clytia hem... [more]
A0A024TEQ6_9STRA3.680e-748.39Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0S6C0_SAPDV6.380e-734.93Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CVC0_SAPPC7.580e-743.84THUMP domain-containing protein n=1 Tax=Saprolegni... [more]
A0A1V9ZVN7_9STRA5.980e-629.77Replication factor C subunit 2 n=1 Tax=Thraustothe... [more]
A0A1V9YB00_9STRA1.890e-532.19Replication factor C subunit 2 n=1 Tax=Achlya hypo... [more]
A0A8K1FNN1_PYTOL2.220e-550.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0M0J654_9EUKA2.500e-538.89Ankyrin repeat protein n=1 Tax=Chrysochromulina to... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2130.30coord: 220..296
e-value: 2.4E-7
score: 33.3
NoneNo IPR availableSUPERFAMILY143437THUMP domain-likecoord: 231..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4081contigH-paniculata_contig4081:12114..16449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4081.10538.1mRNA_H-paniculata_contig4081.10538.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4081 12093..16449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4081.10538.1 ID=prot_H-paniculata_contig4081.10538.1|Name=mRNA_H-paniculata_contig4081.10538.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp
MMNDNAIYSSSHTTVVSSGHKSDHERLGWYIALCLGGLQSTVKAEVERQI
TAHGRWHADVQVFQEDFQGADTLIEGVHPGDAGCGKLIVATDAPPNILKN
ITCIQGLFALIAQAASLDIVVATPGGPVPSRLDGTIMKSPLACSAAERPS
GEIQEDDPAALAIGRIESEITGSPRWPAALDLWRRFMEFEDNDNSRQSTN
VDNASGVGGIGKNDGAGGSDDNERVTVKRDVETLKFRASVVRDGRHAFNS
MEASPRLGGAVLTVNPHWTVDLKEYDVEVVTFILERGVAVGLSLSGDRAK
RCSHGEL
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