prot_H-paniculata_contig11624.1052.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11624.1052.1
Unique Nameprot_H-paniculata_contig11624.1052.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: D7G5L2_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L2_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 4.400e-53
Identity = 91/107 (85.05%), Postives = 96/107 (89.72%), Query Frame = 0
Query:    2 RLPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSLS 108
            RLPVVRF SGLEEV+R EEF LYVGG  VASRRQLP+ALAWALSVHKSQGMSLDR SVCLSRAFEYGQAYVALSRVRSLEGL +VG ID S IRAHPRV+ FYR+LS
Sbjct:  316 RLPVVRFASGLEEVIRPEEFHLYVGGQAVASRRQLPLALAWALSVHKSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSVVGTIDPSKIRAHPRVVSFYRALS 422          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A7S0PZA5_9EUKA (ATP-dependent DNA helicase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZA5_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 2.430e-32
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 0
Query:    4 PVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSL 107
            PVVRF  G E++MR E F L   G VVASR QLP+   WA+SVH+SQGMSLDRV + LS+ FE GQ YVALSR RSLEGL ++ +ID S ++AHP+V+ F++++
Sbjct:   43 PVVRFERG-EQIMRMERFTLVQSGEVVASRTQLPLDYGWAISVHRSQGMSLDRVQISLSKVFECGQTYVALSRARSLEGLSLL-DIDFSKVQAHPKVLAFHQTV 144          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A6A3YZ07_9STRA (ATP-dependent DNA helicase n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YZ07_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.280e-31
Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 0
Query:    3 LPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASN---IRAHPRVIDFYRSLS 108
            LP+VRF++G+ E++  EEF + V   V+ASRRQLP+ALAWA+S+HKSQG+S D   + LSR FE+GQAYVALSRVRSLEGL +   +   N   + A  RV+DFY S+S
Sbjct:  234 LPIVRFSNGVTEIIGLEEFTVSVADTVLASRRQLPLALAWAISIHKSQGLSFDAAVLDLSRVFEFGQAYVALSRVRSLEGLRLRARVRDKNGGRLLADARVVDFYESIS 342          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: L8HAB0_ACACA (ATP-dependent DNA helicase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAB0_ACACA)

HSP 1 Score: 125 bits (315), Expect = 2.930e-31
Identity = 62/109 (56.88%), Postives = 83/109 (76.15%), Query Frame = 0
Query:    4 PVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSLSAAAA 112
            PVVRFT+GLE ++  EE+   VG   VASR Q+P+ LAWALS+HKSQGM+L +V + LS  F YGQAYVALSR ++LEGL ++G  +A  +RAHPRV+++YR  S++ A
Sbjct:  634 PVVRFTTGLERIILPEEWKSEVGPKKVASRTQIPLNLAWALSIHKSQGMTLSKVEMNLSHVFAYGQAYVALSRAQNLEGLYLMG-FEAGKVRAHPRVLEYYRRFSSSVA 741          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: UPI001454E876 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454E876)

HSP 1 Score: 121 bits (304), Expect = 5.000e-31
Identity = 59/105 (56.19%), Postives = 79/105 (75.24%), Query Frame = 0
Query:    3 LPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSL 107
            LP+V+F  G+E+ +R E +P+  G  +V SRRQLP+ LAWA+S+HKSQGMSLD V + L+R FE GQAYVALSR R+LEGL +V + D + +RAHP V+ F+  L
Sbjct:  222 LPIVKFMCGVEQAIRMERWPIRAGAGLVLSRRQLPLKLAWAISIHKSQGMSLDCVEISLARVFECGQAYVALSRARNLEGLRVV-DFDRACVRAHPDVVKFHHVL 325          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A812RKX8_9DINO (ATP-dependent DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RKX8_9DINO)

HSP 1 Score: 124 bits (311), Expect = 7.970e-31
Identity = 65/109 (59.63%), Postives = 78/109 (71.56%), Query Frame = 0
Query:    4 PVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSLSAAAA 112
            PVV+F +G+   +R  ++ + VGG  VA+RRQLP+ LAWALS+HKSQGM+LD V V L R FE GQAYVALSR RSLEGL +V  I A +IRAHP V  FY  L  A A
Sbjct:  445 PVVQFGNGVLRTIRPVDWNVSVGGATVATRRQLPLDLAWALSIHKSQGMTLDAVEVSLGRVFECGQAYVALSRCRSLEGLSLVDRITADSIRAHPDVQAFYAQLQGAEA 553          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A6A3ER38_9STRA (ATP-dependent DNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ER38_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.000e-30
Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 0
Query:    3 LPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASN---IRAHPRVIDFYRSLS 108
            LP+VRF++G+ E++  EEF + V   V+ASRRQLP+ALAWA+S+HKSQG+S D   + LSR FE+GQAYVALSRVRSLEGL +   +   N   + A  RV+DFY S+S
Sbjct:  332 LPIVRFSNGVTEIIGLEEFTVSVADTVLASRRQLPLALAWAISIHKSQGLSFDAAVLDLSRVFEFGQAYVALSRVRSLEGLRLRARVRDKNGGRLLADARVVDFYESIS 440          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A8J9S3Z5_9CHLO (ATP-dependent DNA helicase PIF1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S3Z5_9CHLO)

HSP 1 Score: 123 bits (309), Expect = 1.330e-30
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 MRLPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSLS 108
            +RLP+VRF SGLE  +  E++ +  G  V+A+R Q+P+A AWALSVHKSQGM+LDRV V L+RAFE G AYVALSR RSL+GL I G+I    ++A P+VI FY +++
Sbjct:  490 IRLPIVRFASGLEVTVGKEQWTIKSGNRVLATRTQIPLACAWALSVHKSQGMTLDRVEVNLARAFEAGMAYVALSRARSLQGLHISGDIHPHALQADPKVIAFYAAMA 597          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A0L0FVZ2_9EUKA (ATP-dependent DNA helicase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FVZ2_9EUKA)

HSP 1 Score: 122 bits (306), Expect = 1.950e-30
Identity = 61/110 (55.45%), Postives = 84/110 (76.36%), Query Frame = 0
Query:    1 MRLPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRVIDFYRSLSAA 110
            +RLP+VRF SG E+V+ SE +   V G  VA+R Q+P+ L+WA+SVHKSQGM++D V+V +S+ FE+GQAYVALSR R+LEGL + G   A+NIRA+P+ + FY+ L  A
Sbjct:  386 VRLPIVRFASGAEKVVHSETWAHKVFGREVAARTQVPLRLSWAISVHKSQGMTIDLVNVNISKVFEFGQAYVALSRARTLEGLKVTG-FTAANIRANPKALQFYKKLRQA 494          
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Match: A0A6A4F2U9_9STRA (ATP-dependent DNA helicase n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4F2U9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.920e-30
Identity = 62/109 (56.88%), Postives = 80/109 (73.39%), Query Frame = 0
Query:    3 LPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQGMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASN---IRAHPRVIDFYRSLS 108
            LP+VRF++G+ E++  EEF + V   V+ASRRQLP+ALAWA S+HKSQG+S D   + LSR FE+GQAYVALSRVRSLEGL +   +   N   + A  RV+DFY S+S
Sbjct:  498 LPIVRFSNGVTEIIGQEEFTVSVADTVLASRRQLPLALAWATSIHKSQGLSFDAAVLDLSRVFEFGQAYVALSRVRSLEGLRLRARVRDKNGGRLLADARVVDFYESIS 606          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11624.1052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5L2_ECTSI4.400e-5385.05ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S0PZA5_9EUKA2.430e-3258.65ATP-dependent DNA helicase n=1 Tax=Coccolithus bra... [more]
A0A6A3YZ07_9STRA2.280e-3156.88ATP-dependent DNA helicase n=1 Tax=Phytophthora fr... [more]
L8HAB0_ACACA2.930e-3156.88ATP-dependent DNA helicase n=1 Tax=Acanthamoeba ca... [more]
UPI001454E8765.000e-3156.19ATP-dependent DNA helicase PIF1-like n=1 Tax=Aster... [more]
A0A812RKX8_9DINO7.970e-3159.63ATP-dependent DNA helicase n=1 Tax=Symbiodinium sp... [more]
A0A6A3ER38_9STRA1.000e-3056.88ATP-dependent DNA helicase n=6 Tax=Phytophthora Ta... [more]
A0A8J9S3Z5_9CHLO1.330e-3057.41ATP-dependent DNA helicase PIF1 n=1 Tax=Coccomyxa ... [more]
A0A0L0FVZ2_9EUKA1.950e-3055.45ATP-dependent DNA helicase n=1 Tax=Sphaeroforma ar... [more]
A0A6A4F2U9_9STRA4.920e-3056.88ATP-dependent DNA helicase n=1 Tax=Phytophthora ru... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 20..97
e-value: 5.1E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 2..108
NoneNo IPR availablePANTHERPTHR23274:SF35coord: 2..108
IPR003840DNA helicasePFAMPF02689Herpes_Helicasecoord: 38..85
e-value: 5.0E-7
score: 28.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11624contigH-paniculata_contig11624:3300..5873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11624.1052.1mRNA_H-paniculata_contig11624.1052.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11624 509..6491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11624.1052.1 ID=prot_H-paniculata_contig11624.1052.1|Name=mRNA_H-paniculata_contig11624.1052.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MRLPVVRFTSGLEEVMRSEEFPLYVGGVVVASRRQLPIALAWALSVHKSQ
GMSLDRVSVCLSRAFEYGQAYVALSRVRSLEGLVIVGEIDASNIRAHPRV
IDFYRSLSAAAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003840DNA_helicase
IPR027417P-loop_NTPase