mRNA_H-paniculata_contig40534.10484.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Match: D7FY28_ECTSI (Phosphotriesterase-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY28_ECTSI) HSP 1 Score: 127 bits (319), Expect = 3.220e-32 Identity = 66/137 (48.18%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 4 LKGAMQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAV--------SREIVFTGMCGGIGQSIDGQMQLLEKGFVLCFDCFGRCEWSSGADFYPSDEESAVRIAALVKSGYTRQILISQGVARRIHLSR 390
L+GA AQ+ TGAP++I F + V A++ A +Q SR+++ GM GG+ QS+ Q LL KG VLCFDCFGR EW G D+YPSDEESAVRIA LV+ G+ +I++S GV+RR HLSR
Sbjct: 220 LEGAAMAQQATGAPLMIACSHFVRWPMVVAALVIATAHWGSSQDGTAXXXXXXXSRKVIVAGMHGGVSQSLHHQASLLSKGIVLCFDCFGRVEWLPGPDYYPSDEESAVRIAELVRQGFAERIILSSGVSRRFHLSR 356
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Match: A0A3B9BP55_9RHOB (Phosphotriesterase-related protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3B9BP55_9RHOB) HSP 1 Score: 59.3 bits (142), Expect = 1.000e-7 Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 1 ILKGAMQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAVSREIVFTGMCGGIGQSIDGQMQLLEKGFVLCFDCFGRCEW-SSGADFYPSDEESAVRIAALVKSGYTRQILISQGV 366
+L+ + +A +TG P++I P +F+ V V+A + + + R I+ G+ + Q L ++G L +D G W + A PSDEESA+ I+ L KSGY QIL+SQ V
Sbjct: 184 VLRASARASVETGLPLMIHLPAWFRLAHEVLNVVA------ECGQPLDRVILCH--MNPSGKDVSYQKSLADRGAYLEYDMLGMDFWYADQAAQCPSDEESAIAISGLFKSGYGHQILLSQDV 298
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Match: A0A4R1S986_9HYPH (Phosphotriesterase-related protein n=1 Tax=Rhizobium sp. BK251 TaxID=2512125 RepID=A0A4R1S986_9HYPH) HSP 1 Score: 55.5 bits (132), Expect = 2.270e-6 Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 4 LKGAMQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAVSREIVFTGMC--GGIGQSIDGQMQLLEKGFVLCFDCFGRCEWSSGADFY-PSDEESAVRIAALVKSGYTRQILISQGVARRIHLSR 390
L+GA QAQ +TG P+++ PG+F+ V V+A++ E+ T +C ++ Q +L +G + +D G + + PSDEE+A IA L ++GY +IL+S V ++ L+R
Sbjct: 191 LRGAAQAQARTGLPLMVHLPGWFRLGHKVLDVVASE----------GAELRHTVLCHMNPSHDDLNYQGELAARGAFIEYDMIGMDFFYADQQVQCPSDEEAARAIARLAETGYLDRILLSHDVFLKMMLTR 312
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Match: A0A523ZWY0_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A523ZWY0_9CHLR) HSP 1 Score: 51.6 bits (122), Expect = 4.390e-5 Identity = 39/131 (29.77%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 1 ILKGAMQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAVSREIVFTGMCGGIGQSIDGQMQLLEKGFVLCFDCFGRCEWSSGADF-YPSDEESAVRIAALVKSGYTRQILISQGVARRIHLSR 390
+L+ ++A +TGAP+ I P + F AV +L + +++ GM + Q D + ++G+ L FD FG+ W G + P D E + L+++G RQ+LISQG+ R++ L R
Sbjct: 114 VLRAGVRASVRTGAPLAIDCPPG-EVFDAVHRLLGEE-------HMPPTKVLLCGMDRDMAQ--DERKCAADRGYYLLFDGFGKEWWIRGGERRIPVDPERLRWLKELIEAGCLRQLLISQGIDRKMLLVR 234
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Match: S5Y4Y7_PARAH (Aryldialkylphosphatase n=2 Tax=Paracoccus TaxID=265 RepID=S5Y4Y7_PARAH) HSP 1 Score: 51.6 bits (122), Expect = 5.080e-5 Identity = 38/124 (30.65%), Postives = 61/124 (49.19%), Query Frame = 1
Query: 4 LKGAMQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAVSREIVFTGMCGGIGQSIDG--QMQLLEKGFVLCFDCFGRCEWSSGADF-YPSDEESAVRIAALVKSGYTRQILISQGV 366
L+GA QAQ +TG P+++ P +F+ V + A+ D K T +C D Q +L +G + +D G + + D P+D +SA I L+++GY+RQIL+S V
Sbjct: 194 LRGAAQAQARTGLPLMVHLPAWFRVAHKVLDICEAEGADLK----------HTILCHMNPSWADRTYQHELAARGAFIEYDMLGNLFYYADQDVDCPADADSARAIQGLIEAGYSRQILLSHDV 307
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Match: UPI001D02B89A (phosphotriesterase-related protein n=1 Tax=Pseudogemmobacter sp. CC-YST710 TaxID=2755041 RepID=UPI001D02B89A) HSP 1 Score: 51.2 bits (121), Expect = 6.890e-5 Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 1
Query: 4 LKGAMQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAVSREIVFTGMCGGIGQSIDG--QMQLLEKGFVLCFDCFGRCEWSSGADF-YPSDEESAVRIAALVKSGYTRQILISQGVARRIHL 384
L+GA QAQ +TG P+++ P +F+ V + A+ D K T +C D Q +L +G + +D G + + D P+D + A I L+++GY+RQIL+S V ++ L
Sbjct: 190 LRGAAQAQARTGLPLMVHLPAWFRLAHKVLDICEAEGADLK----------HTVLCHMNPSWADRNYQHELAARGAFIEYDMIGNLFYYADQDVDCPADADCARAIQGLIEAGYSRQILLSHDVFLKVML 309 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40534.10484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40534.10484.1 >prot_H-paniculata_contig40534.10484.1 ID=prot_H-paniculata_contig40534.10484.1|Name=mRNA_H-paniculata_contig40534.10484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp MQAQEKTGAPVLIQFPGFFQNFPAVTAVLAADMDDDKAQKAVSREIVFTGback to top mRNA from alignment at H-paniculata_contig40534:312..704- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40534.10484.1 ID=mRNA_H-paniculata_contig40534.10484.1|Name=mRNA_H-paniculata_contig40534.10484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=393bp|location=Sequence derived from alignment at H-paniculata_contig40534:312..704- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40534:312..704- >mRNA_H-paniculata_contig40534.10484.1 ID=mRNA_H-paniculata_contig40534.10484.1|Name=mRNA_H-paniculata_contig40534.10484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig40534:312..704- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |