mRNA_H-paniculata_contig11609.1039.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11609.1039.1
Unique NamemRNA_H-paniculata_contig11609.1039.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 2.640e-78
Identity = 150/364 (41.21%), Postives = 210/364 (57.69%), Query Frame = 3
Query:  318 LAVWYALALSPSKKRLPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRSDPSREFDGKIGIRRVFVIKQAQRNS-------------AWRERG----------QQYEFGVTIDVEWYQDSF----LPALKENMP*LEGEEVVTQ*NGAIL-TGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLM 1325
            +AV  A+ + P   R+PKGV   + E++GVG +YP  L  RV  Q+D+   L L    RSGR S  TP+K   ++ VN+ NR  T  Q+  +L ++GL  G   ++RW  ++GA +   RI  SLS   +  R+DFI D+       +      +H+DE+WFYL+R++++VR+F GE+     +V H+S +PK+MVI A +R DP+ +FDGKIGI R+ VI+ AQR+S              WRE            ++YEF  TID EWY+D +    LPA+KE MP L  + VV Q +GA   TGK  P  +N  G   G  V +VTQPAQSPD+NINDLG F  LK +VW     +ID L+
Sbjct:    1 MAVEIAMGIQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: UPI001C2688CA (uncharacterized protein LOC121745962 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2688CA)

HSP 1 Score: 121 bits (303), Expect = 1.090e-25
Identity = 109/398 (27.39%), Postives = 179/398 (44.97%), Query Frame = 3
Query:  363 LPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSF----LTFRSGFQAMHIDEAWFYLIRDRDRVRMFPGE-ERARSTKVQHKSQIPKVMVISAVSR----SDPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGV-TIDVEWYQDSFL----PALKENMP*LEGEEVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATL--VWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDRE 1508
            LP G   + A  FGV +   R + A   EQ+  G  +  +   +  + +D         R ++   R  T  ++ SKL         S +  WIK+         I S LS  ++  R+ + L Q         + + S    +HIDE WFY+ +  DR  + P E E  RS  +Q K  I KVM + AVS+    S+    FDGK GI        AQRNS  R RG      + +++ E  +D  +    PA+K   P    ++++ Q + A        +   E     G ++ IV QP  SPD N+NDLGFF  ++S    K    +D L++ V + +D     TL  V+ +L     ++L+  G +++++ H   ++ +    LP  +++D++
Sbjct:   31 LPFGSKKKAATTFGVSYMTVRRIWAAAMEQVAKGEPIQFKSNKKGKQHADLLLIDEAKFRSLSVLERT-TIRKMASKLE-----VSKSLVGVWIKQGKLRPHTNAIKSQLSEANKIARMKWSLSQLRLDNNLDKMFYNSMQNVVHIDEKWFYMTKASDRYYLLPDEIEPYRS--IQSKRFINKVMFMCAVSKPHFDSNGELLFDGKYGIFPFTTQVAAQRNSKNRVRGTLETKPINSVNKEIMKDCIINQIVPAIKAKWPASSCKDIIIQQDNAKPHIMPNDQEFKEAANTDGFNIKIVCQPPNSPDTNVNDLGFFRAIQSLQDDKSAKNVDDLLKNVVASFDELSPHTLDSVFLTLQSCLTEILRVKGGNNYKIPHMNKQRLRNLGLLPMFLEVDKD 420          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034)

HSP 1 Score: 120 bits (302), Expect = 1.490e-25
Identity = 111/400 (27.75%), Postives = 175/400 (43.75%), Query Frame = 3
Query:  363 LPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMH----IDEAWFYLIRDRDRVRMFPGEERA-RSTKVQHKSQIPKVMVISAVSRS----DPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGV-TIDVEWYQD----SFLPALKENMP*LEGEEVVTQ*NGAI--LTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATL--VWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDRE 1508
            L +G   E+AE F V  +    L     EQ+  G    +    +    +D        +R ++    VL    L    A++ +  G+  + +W+KE         I  SL+  ++  RV + L Q        R  +Q+MH    IDE WFY+ +  DR  + P E+   RS K   K  I KVM + AVSR     D    +DGK+GI     +  AQR S  R RG      + ++  E  +D      +PA+K   P    +++  Q + A   +T  D   +        G  + ++ QPA SPD NI DLGFF  ++S  + K   T+D L+  V S +      TL  V+ SL     ++L   G + ++V H    + QR   LP  ++++ +
Sbjct:   32 LARGAVMEVAETFEVSRKTVYRLWKAAKEQMQRGEPAIMEGKIKGYHHADKLELDEEKVRHLS----VLERASLRKMAAKLNVSKGT--VGQWVKEGKLRPHTNAIKPSLTNINKLARVRWSLSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRSCK--SKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDP--DFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDRLQRTVGLPNVLEVEED 421          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3)

HSP 1 Score: 119 bits (297), Expect = 6.750e-25
Identity = 109/426 (25.59%), Postives = 194/426 (45.54%), Query Frame = 3
Query:  309 RNSLAVWYALALSPSKKRLPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFL----TFRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSR----SDPSREFDGKIGIRRVFVIKQAQRNSAWRERG----QQYEFGVTIDV-EWYQDSFLPALKENMP*LEGEEVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATL--VWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDREASDAAVEWWTD 1541
            RN +   +AL+++ + ++L KG+  ++A  +GV       L  +V +    G   +++   + G            + +V +   +  H +   +     L A  SK+ R I++         +   L+ ++ E RV+F+L     S L    T+   F  +HIDE WFY+ R   +  + P E+     + + K  I K+M +SAV+R    +D +  FDGKIGI      + A R+   R RG    +  E    + + +   +  +PA+K   P      +V Q + A     +T  +  E+ +  G ++ +  QPA SPD+NINDLGFF  ++     K   T+  L+  V   Y+    +TL  VW SL     ++L+  G++++++ H    K +R   LP  +    +    A+E  T+
Sbjct:   36 RNQIV--HALSINYNNQKLKKGMINKIASDYGVSRVTISKLWQKVLQSTRKGEVPNVQTNYKGGSQGILLD-----LEKVRS---IPLHLRTNVRTLACQLGASKSKVHRLIQKGKIKSHSNALKPFLTPSNMEARVNFVLKHIESSTLHTNPTYIDMFSIVHIDEKWFYMTRISQKYYLLPDEQEPHR-RCKSKRFITKIMFMSAVARPRYDADGNCTFDGKIGIFPFTFDEPAARSIKNRARGVIEVKPIESITKVVIKQCLLEKIIPAIKAKWPLDCNRPIVIQQDNARPHICNTDLDFIEVAKSDGFNITLANQPANSPDLNINDLGFFRVIQGLQHEKAPTTVCELVGAVLEAYEEVSDSTLNHVWLSLMGCMTEILRKDGNNNYKLPHIGKGKLERLGQLPTVLNALLDVVQKALEMATE 450          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU)

HSP 1 Score: 118 bits (296), Expect = 1.510e-24
Identity = 115/428 (26.87%), Postives = 195/428 (45.56%), Query Frame = 3
Query:  282 KNCQLREEGRNSLAVWYALALSPSKKRLPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDH-----GNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSK--LQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSR----SDPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGV-TIDVEWYQ----DSFLPALKENMP*L-EGEEVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATLVWQSLFKRYN----QVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKID 1502
            +N  L E  R ++  +     S +  +LPKG   E A  FGV  +    +     E +D      G+  + R     GR S F   +   +++V+  +R        S L  +   +G ++  L  ++K+    R    +   L+  +++ RV+F L    +    F   +  +HIDE WFYL     +  +  GE    ST  + K  I KVM + AV+R    +D +  FDGKIGI    V + AQRNS  R RG      + +++   YQ    +  LPA++E  P   +   +  Q + A      +   V E  R+ G ++ + TQP  SPD N+ DLGFF  +++  ++KR   ID L+  V+      + +T+   S+F        + +K  G++ ++++H   +K  +  +LP S+  D
Sbjct:   74 QNLTLNE--RQAVVHFLLPKQSTTSAKLPKGAFKESAALFGVTARTCSRVWKMYLETVDPETCPAGDVSTNR--KNCGRKSTFAAVEE-AVKKVSYKDR--------SDLRTLSAASGIARTTLGNYVKKGQILRHSGAVKPFLTEKNKKARVEFALS-LIKPDGKFEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLRSRAAVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEAL--VETSTIALNSIFLSLQCALEESIKVQGNNSYKLRHMGKEKLLKEDNLPVSITCD 484          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV)

HSP 1 Score: 118 bits (296), Expect = 1.710e-24
Identity = 114/407 (28.01%), Postives = 186/407 (45.70%), Query Frame = 3
Query:  363 LPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRS----GRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLT----FRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRS--DPSRE--FDGKIGIRRVFVIKQAQRNSAWRERG---QQYEFGVTIDV--EWYQDSFLPALKENMP*LEGEEVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYD--VATLVWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDREASDAAV 1526
            LP+G+   L +++         +     +Q   G  + +  ASR     GR   FT  +   +RRV    R  T  + F+   EV        L+R I       +K ++T      H+  R+ F+L Q+    +     F   +  +HIDE WF++ +   R  +   EE       Q K+ I KVM ++A++R    P+ +  +DGKIGI       +AQR SA R  G   ++ +  +T +   E   +  LPA++   P    +E+  Q + A    +       E  R+GG  +NI+ QPAQSPD+NI DLGFF+ ++S   +    T+D L++ V+  Y  Y+  +    W  L     ++LK  G ++++  H   KK  R   LP +V+I  E  +  V
Sbjct:   98 LPRGLLTTLRQKYSCSRSTMNRIWTLARKQKIDG--VEVNVASRKIGNCGRKVKFTDDE--ALRRVPLKQR--TTIRSFATALEVSPSTVYRLLKRGILRSHTNSIKPKLTPK----HKVARMKFVLSQSIPKSMNELPKFNHLYNMIHIDEKWFFMSKITQRFYLLSEEEDPYRA-CQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAKWPENGCKEIWIQQDNARPHIQPNDAEFLEACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEELVNDTV 493          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: UPI001C2701CF (uncharacterized protein LOC121760366 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2701CF)

HSP 1 Score: 116 bits (291), Expect = 3.910e-24
Identity = 106/408 (25.98%), Postives = 170/408 (41.67%), Query Frame = 3
Query:  363 LPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMH----IDEAWFYLIRDRDRVRMFPGEERA-RSTKVQHKSQIPKVMVISAVSRS----DPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGV-TIDVEWYQD----SFLPALKENMP*LEGEEVVTQ*NGAI--LTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATL--VWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDREASDAAVEW 1532
            L +G   E A+ F V  +    +     E +  G    ++   +    +D        +R ++   R       F       L    S L +W+K          I  +L+  ++  RV + L Q        R  +Q+MH    IDE WFY+ +  DR  + P E+   R+ K   K  I KVM + AVSR     D    +DGK+GI     +   QR S  R RG      V ++  E  +D      +PA+K   P    +++  Q + A   +T  D       +    G  + ++ QPA SPD NI DLGFF  ++S  + K   T+D L+  V S +      TL  V+ SL     ++L+  G + ++V H    + QR   LP  ++++       ++W
Sbjct:   32 LARGAVMEAADAFEVSRKTVYRVWKTAKELMQRGEPAIMQGKIKGYHHADQLKIDEEKVRNLSTLERASLRKMAFK------LNVSKSTLGQWVKHGKLRPHTNAIKHALTNVNKIARVRWSLSQLQPQITQGRVPYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRACK--SKRFITKVMFMCAVSRPHFGMDGQPTYDGKVGIFPFTEVMPTQRRSKNRPRGTMETKAVHSVTKEVMRDCLINKIIPAIKARWPVWASKDIYIQQDNATPHITAMDP--EFQAVANSDGFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSYFAELSPQTLNRVFLSLQACLTEILRCRGGNGYKVPHINKDRLQRTVGLPNQLEVEEGVVREVLQW 429          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS)

HSP 1 Score: 114 bits (285), Expect = 2.110e-23
Identity = 117/432 (27.08%), Postives = 192/432 (44.44%), Query Frame = 3
Query:  285 NCQLREEGRNSLAVWYALALSPSKKRLPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSL-----RCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAM----HIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSR----SDPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYE---FGVTIDV--EWYQDSFLPALKENMP*LE-GEEVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATL--VWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDREASD 1517
            N  L  E R    ++ AL L     +L +G  PE+A  F V ++    + +R      HG+ + +     R   R  R  D+   +     R        T+ + FS+  EV      S L + IKE         +  +LS  ++  R+ F L     + L  +  F+AM    HIDE WFY+ ++ +R  + P E++   T  + K  I KVM ++AV+R    ++   EF GKIGI    V + A+R S  R  G         VT DV   +  +  +PA++        GE +  Q + A    K      +E     G  + +  QPA SPD+N+ DLGFF  ++S   ++   TID L+  V+  +D      L  V+ SL     +V+K  G +++++ H +  + +R   LP  ++  R+  +
Sbjct:   16 NHNLTNEQRKE--IFQALLLRTVDGKLTRGCVPEVATMFSVSNKTIHRIWSRAKACEAHGSKVDVSSKKRRRVGRKRREIDWNKVRGIAFHRR-------TNIRSFSEALEVP----KSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPMFKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRT-CKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVGETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLECGRDVME 433          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.500e-23
Identity = 113/395 (28.61%), Postives = 179/395 (45.32%), Query Frame = 3
Query:  360 RLPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDHGNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAGSSKLQRWIKEMGATRVKRRITSSLSLTHREKRV----DFI-LDQAARSF---LTFRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRSD----PSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGVTIDVEWYQDSF----LPALKENMP*LEGEEVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAY--DVATLVWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKS 1490
            RLP G   E A +F    +  R + +R G      +    R   +   S D   T+   IR V   NR      + +  A+VGL    + L R +K     R    ++ SL+   + KR+     F+ L +  RS      F +    +H+DE WF+L +D+    +  GEE    T  +HKS IPK+M ++AV R       S+ FDGK+GI    +   A+R+S  + +G       T+  + Y D+     LPA+    P    + +  Q +GA     D    +       G ++ +VTQPA SPD+NI DLGFF  +++  +RK   TID  ++ V   +     D    VW SL +R   ++   GD+  +++H   +  ++   LP S
Sbjct:   15 RLPHGTIKEAAAKFECDRKTVR-MFSRDGISGVGSSRKKGRVGRKKLVSDDEAITR---IRAVELRNR----QNIRTLAAQVGLPY--TTLFRKLKAGVIRRATSTLSPSLTDACKYKRLLHCLSFLRLSKTTRSCPAAFKFHAMLDWIHLDEKWFFLDKDKRTFYLVKGEELPSRT-ARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCPELVASAASFGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEHMRKEALRKQGKLPLS 397          
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.180e-22
Identity = 121/442 (27.38%), Postives = 187/442 (42.31%), Query Frame = 3
Query:  261 ESPSARGKNCQLREEGRNSLAVWYALALSPSK----KRLPKGVGPELAEQFGVGHQYPR*L*ARVGEQLDH-----GNALSLRCASRSGRSSDFTPTKHPTIRRVNAGNRVLTHDQLFSKLAEVGLVAG--SSKLQRWIKEMGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSR----SDPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGVTIDVEWYQ----DSFLPALKENMP*LEGE-EVVTQ*NGAILTGKDTPRNVNELGRDGG*HVNIVTQPAQSPDVNINDLGFFEYLKSKVWRKRYGTIDGLMEGVKSMYDAYDVATL--VWQSLFKRYNQVLKSLGDHDFRVQHTEIKKRQRGASLPKSVKIDREASDA 1520
            E+ S + K  +L      S  V + L    S     K L +G     A  F    +    +  R  E  D      GN  + R  +R GR           +RRV   +R          L  +  V G   S L R ++     +        L+  ++ KRV++IL+    +   F   F+ +HIDE WFYL R +    + PGE   +ST  + K+ + KVM + A +R    ++    FDGKIGI    V + A+R+S  R +G        +D E Y+    +  LPA+ E  P      E+  Q + A          V       G ++ + TQP  SPD+N+ DLGFF  ++S  ++KR   ID L+  V+  +D     TL  V+ SL       L   GD+++++ H       R  +LP S+  D +  +A
Sbjct:   93 ETASPQTKKLRLLSNNERSAVVHFLLQNLRSSHGEDKVLARGAQKAAAVVFQTSPKTISRIWKRYKETCDPINCPAGNVSNRR--NRCGRKQMHLEDLDALVRRVPMKDR--------GDLRTLSAVTGIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNG-RFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTLPISIICDPDRINA 522          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.640e-7841.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001C2688CA1.090e-2527.39uncharacterized protein LOC121745962 n=4 Tax=Salvi... [more]
UPI002008F0341.490e-2527.75uncharacterized protein LOC125206616 n=4 Tax=Salvi... [more]
UPI0007EF40B36.750e-2525.59uncharacterized protein LOC108194535 n=1 Tax=Daucu... [more]
I6THG9_PSEMU1.510e-2426.87Tranposase n=1 Tax=Pseudo-nitzschia multiseries Ta... [more]
J3S7K7_BETVV1.710e-2428.01Mariner transposase n=2 Tax=Beta vulgaris subsp. v... [more]
UPI001C2701CF3.910e-2425.98uncharacterized protein LOC121760366 n=3 Tax=Salvi... [more]
A0A834FW95_RHOSS2.110e-2327.08Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A6G0X8U9_9STRA6.500e-2328.61Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A448ZNT1_9STRA1.180e-2227.38Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11609contigH-paniculata_contig11609:2..1973 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score64.7
Seed ortholog evalue4.2e-08
Seed eggNOG ortholog38727.Pavir.J07271.1.p
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493,3IN47@38820,3M58A@4447
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size1972
Cds size453
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11609.1039.1prot_H-paniculata_contig11609.1039.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11609 652..1104 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928871.5119607-UTR-H-paniculata_contig11609:1..6511622928871.5119607-UTR-H-paniculata_contig11609:1..651Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11609 2..651 +
1691480651.551292-UTR-H-paniculata_contig11609:1..6511691480651.551292-UTR-H-paniculata_contig11609:1..651Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11609 2..651 +
1622928871.571302-UTR-H-paniculata_contig11609:1104..19731622928871.571302-UTR-H-paniculata_contig11609:1104..1973Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11609 1105..1973 +
1691480651.5721114-UTR-H-paniculata_contig11609:1104..19731691480651.5721114-UTR-H-paniculata_contig11609:1104..1973Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11609 1105..1973 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928871.5320191-CDS-H-paniculata_contig11609:651..11041622928871.5320191-CDS-H-paniculata_contig11609:651..1104Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11609 652..1104 +
1691480651.5597725-CDS-H-paniculata_contig11609:651..11041691480651.5597725-CDS-H-paniculata_contig11609:651..1104Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11609 652..1104 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11609.1039.1

>prot_H-paniculata_contig11609.1039.1 ID=prot_H-paniculata_contig11609.1039.1|Name=mRNA_H-paniculata_contig11609.1039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMHIDEAW
FYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRSDPSREFDG
KIGIRRVFVIKQAQRNSAWRERGQQYEFGVTIDVEWYQDSFLPALKENMP
*
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mRNA from alignment at H-paniculata_contig11609:2..1973+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11609.1039.1 ID=mRNA_H-paniculata_contig11609.1039.1|Name=mRNA_H-paniculata_contig11609.1039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1972bp|location=Sequence derived from alignment at H-paniculata_contig11609:2..1973+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCTTCGGGGATCTAAATCGGGGCCTTGTACTTGATACATTGCTGTGGG TTTAAGCTTCTTCCCTCACAGCACTTTCGAAAGTATATGATCGACATTGT ATACCTCCGGGGTGGAAAGAAAGAAAATGCCCCCCCCTATCGTCACACAA CATCTCAGCACCTCGTCAAAAGCTGTAAGACTCTCGTGCAGCCTCCAAAC CGTCTGCGGAGCGAGTTTCGCAACCAACATAACCACTCCCGCGAGTCCGG TATATTTGCCGAGAGCCCATCAGCCCGGGGTAAAAATTGCCAACTGAGGG AGGAAGGTCGAAACTCGTTGGCTGTATGGTACGCTTTAGCGCTATCTCCC AGTAAGAAACGGCTTCCGAAAGGCGTTGGGCCAGAGTTGGCGGAGCAGTT TGGAGTTGGCCATCAATACCCCAGATAACTTTGAGCGCGTGTAGGAGAAC AACTGGACCATGGCAACGCCCTTTCGCTGAGGTGTGCGTCACGAAGTGGG CGGTCTTCGGATTTCACACCGACAAAGCACCCCACGATTCGAAGGGTCAA CGCCGGGAATCGAGTCCTGACCCACGATCAACTATTTTCCAAGCTAGCCG AAGTTGGTCTCGTAGCCGGAAGCTCAAAACTTCAGCGATGGATCAAAGAG ATGGGCGCCACGAGGGTGAAACGACGCATTACCTCATCTCTGTCGCTGAC GCACCGAGAAAAGCGGGTAGACTTTATCTTGGACCAAGCTGCAAGGAGCT TCCTCACTTTCAGGAGCGGCTTCCAAGCAATGCACATCGACGAAGCGTGG TTTTACTTAATTCGCGACAGGGATCGCGTCCGCATGTTCCCTGGGGAGGA AAGGGCGAGGTCCACCAAAGTACAGCACAAGAGTCAGATTCCTAAGGTGA TGGTCATTTCCGCCGTTTCGCGTTCAGATCCTTCCCGCGAATTCGATGGC AAAATTGGAATCCGGCGTGTTTTCGTCATCAAGCAAGCACAGAGGAATTC GGCCTGGCGTGAACGGGGGCAGCAATATGAGTTCGGCGTGACCATTGACG TCGAGTGGTACCAGGACTCTTTTCTTCCAGCATTGAAGGAAAATATGCCA TAGTTGGAGGGTGAGGAAGTGGTCACGCAGTAGAACGGAGCGATCCTCAC GGGGAAAGACACACCGCGGAACGTCAACGAACTCGGGAGGGATGGAGGGT GACACGTTAATATCGTAACTCAACCTGCGCAATCACCAGATGTCAACATC AACGATTTGGGGTTCTTTGAATATTTGAAGAGTAAGGTTTGGAGGAAGCG TTACGGTACGATAGACGGCCTTATGGAGGGGGTAAAGAGCATGTACGATG CGTACGACGTGGCAACCTTAGTGTGGCAGAGCCTCTTTAAGCGGTATAAT CAGGTCTTAAAGTCGCTAGGAGATCACGATTTCAGGGTGCAGCATACCGA AATCAAGAAAAGGCAGCGTGGGGCAAGTCTGCCAAAATCGGTCAAAATCG ACCGAGAGGCTTCAGACGCGGCGGTAGAATGGTGGACTGATGGGAACGAG TAAAGCTGCGAAGAAACAAGTATCGTAAAGAACACCCAGGAATCTGACGC AAAAATCCGTTTTTTTATTCGGAGGTTATTGCGACAAGATACACCCTTAA CGTCGCAGACTTATGGGACGGAGAGAGAATATATTTTTGGTCACCGTATT TCTACTTTACACGCTCTCGCACAAGCCTTGACGGCTCTTGCAGAAGTTGG CCACTAGCATCGGACTATTGTCTGTGCTCTACAGTGGCCCCCGACCGGTG GTGTTATGCTATGCAGTGTCGTACAGGCCGAGTTCTGAGTGTCAATAACT ATTGGAACATCAGGTATTTTTGCAAAAATGAATTCTGATGACAAGTGCCG CTAACGTAAGGATGTTTCGAGATCATGAAGCTGCCCAAGAGCTTTAAAAG GCCATGCGTAGGTTACCTTCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig11609:2..1973+

>mRNA_H-paniculata_contig11609.1039.1 ID=mRNA_H-paniculata_contig11609.1039.1|Name=mRNA_H-paniculata_contig11609.1039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig11609:2..1973+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGCCACGAGGGTGAAACGACGCATTACCTCATCTCTGTCGCTGAC
GCACCGAGAAAAGCGGGTAGACTTTATCTTGGACCAAGCTGCAAGGAGCT
TCCTCACTTTCAGGAGCGGCTTCCAAGCAATGCACATCGACGAAGCGTGG
TTTTACTTAATTCGCGACAGGGATCGCGTCCGCATGTTCCCTGGGGAGGA
AAGGGCGAGGTCCACCAAAGTACAGCACAAGAGTCAGATTCCTAAGGTGA
TGGTCATTTCCGCCGTTTCGCGTTCAGATCCTTCCCGCGAATTCGATGGC
AAAATTGGAATCCGGCGTGTTTTCGTCATCAAGCAAGCACAGAGGAATTC
GGCCTGGCGTGAACGGGGGCAGCAATATGAGTTCGGCGTGACCATTGACG
TCGAGTGGTACCAGGACTCTTTTCTTCCAGCATTGAAGGAAAATATGCCA
TAGATGGGCGCCACGAGGGTGAAACGACGCATTACCTCATCTCTGTCGCT
GACGCACCGAGAAAAGCGGGTAGACTTTATCTTGGACCAAGCTGCAAGGA
GCTTCCTCACTTTCAGGAGCGGCTTCCAAGCAATGCACATCGACGAAGCG
TGGTTTTACTTAATTCGCGACAGGGATCGCGTCCGCATGTTCCCTGGGGA
GGAAAGGGCGAGGTCCACCAAAGTACAGCACAAGAGTCAGATTCCTAAGG
TGATGGTCATTTCCGCCGTTTCGCGTTCAGATCCTTCCCGCGAATTCGAT
GGCAAAATTGGAATCCGGCGTGTTTTCGTCATCAAGCAAGCACAGAGGAA
TTCGGCCTGGCGTGAACGGGGGCAGCAATATGAGTTCGGCGTGACCATTG
ACGTCGAGTGGTACCAGGACTCTTTTCTTCCAGCATTGAAGGAAAATATG
CCATAG
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