prot_H-paniculata_contig11609.1039.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11609.1039.1
Unique Nameprot_H-paniculata_contig11609.1039.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
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BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.320e-32
Identity = 71/177 (40.11%), Postives = 102/177 (57.63%), Query Frame = 0 
Query:    1 MGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRSDPSREFDGKIGIRRVFVIKQAQRNS-------------AWRERG----------QQYEFGVTIDVEWYQDSF----LPALKENMP 150
            +GA +   RI  SLS   +  R+DFI D+       +      +H+DE+WFYL+R++++VR+F GE+     +V H+S +PK+MVI A +R DP+ +FDGKIGI R+ VI+ AQR+S              WRE            ++YEF  TID EWY+D +    LPA+KE MP
Sbjct:  112 LGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMP 288
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BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Match: W4FZU0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZU0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.950e-7
Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 0 
Query:   41 FQAMHIDEAWFYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRSDPSREFDGKIGIRRVFVIKQAQRNSAWRERGQQYEFGVTIDV--EWYQDSFLPALKE 147
            + A+HIDE WFY+ + R R  ++  EE      VQ KS I KVM + AV+R  P  ++DGK G     V   AQR SA R  G      VT  V   +  +  +P++KE
Sbjct:  113 YNAVHIDEKWFYITKIRRRFYLWHDEENM-PRHVQSKSHITKVMFLVAVAR--PRSDWDGKFGCWPFVVSTPAQRTSANRPAGAL----VTKSVYRSYLVEKVIPSIKE 214
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11609.1039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.320e-3240.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4FZU0_9STRA4.950e-738.53Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 5..150
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 5..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11609contigH-paniculata_contig11609:652..1104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11609.1039.1mRNA_H-paniculata_contig11609.1039.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11609 2..1973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11609.1039.1 ID=prot_H-paniculata_contig11609.1039.1|Name=mRNA_H-paniculata_contig11609.1039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MGATRVKRRITSSLSLTHREKRVDFILDQAARSFLTFRSGFQAMHIDEAW
FYLIRDRDRVRMFPGEERARSTKVQHKSQIPKVMVISAVSRSDPSREFDG
KIGIRRVFVIKQAQRNSAWRERGQQYEFGVTIDVEWYQDSFLPALKENMP
*
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