prot_H-paniculata_contig11602.1036.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11602.1036.1
Unique Nameprot_H-paniculata_contig11602.1036.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length208
Homology
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 1.820e-116
Identity = 166/208 (79.81%), Postives = 181/208 (87.02%), Query Frame = 0
Query:    1 QIACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSKDNTVPEPAPVDLSDLSPVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKGLSVVDPGPA 208
            Q+ACGGYHSAV TDAGRVF WGFNRYGQCGNGSKDNTVPEP+ VDLS ++P  +G   +V+CGRHHSAL+T  GALYTWGACSFGKLG  D EKTVC PQEVTFFSD PL QA+AGDFHMVALSR+  VFSWGYGAEGQGGHGSLLHMR PRRV+SLQ+VP+ QVVCG WWSMAITVDGYCY+WG ADGGWTGL  P GL VVDPGP+
Sbjct:  154 QVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPS 361          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.210e-63
Identity = 107/211 (50.71%), Postives = 129/211 (61.14%), Query Frame = 0
Query:    1 QIACGGYHSAVVTDAGRVFAWGFNRYGQCGNGS-KDNTVPEPAPVDLSDLSPVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQA--SAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKG-LSVVDPGP 207
             +A GGYHS  VT AGR FAWGFNRYGQCG G   D  V EP  V L +L   G G  A   CGRHH   +   G +Y WGA  FG+LG +DP K    P EV       + +   + G++H +A + R AV+SWGYG +GQ GHG   H+RTPR V  L+  P+ QV CG  WSMA+T  G+ Y+WGCADGGWTGL  P G L  V+PGP
Sbjct:   61 SVAAGGYHSVAVTRAGRGFAWGFNRYGQCGVGDCADAVVSEPRAVALRELRARGEGVRAAA-CGRHHCVAVGTGGGVYAWGAGGFGRLGVADPPKVAPYPVEVGALRGQRVAEVRVACGEYHNLARTERGAVYSWGYGLDGQCGHGGAQHLRTPRIVERLKGNPVVQVACGSLWSMAVTSTGHLYAWGCADGGWTGLQCPPGVLRCVEPGP 270          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: K8Z8W0_NANGC (Hect domain and rld 4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8W0_NANGC)

HSP 1 Score: 209 bits (531), Expect = 1.470e-61
Identity = 102/208 (49.04%), Postives = 131/208 (62.98%), Query Frame = 0
Query:    2 IACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSKDNTVPEPAPVDLSDLSPVGLGSSA--QVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKGLSVVDPGP 207
            +ACGG HSAV T    VF +GFNRYGQ G G   N +  P PV++S     G+GSS   Q++CGRHH+++LT  G +++WGA SFG+LG  DP+K V  P EV  F   PL   + GDFH++ L      ++WGYG+EGQGG G+ LH+RTPR V  L+   I Q+ CG WWSM +T  G  Y+WG  DGGW GL     L  V+P P
Sbjct:  232 VACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMS-----GIGSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCP 434          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: W7U0Q3_9STRA (Putative e3 ubiquitin-protein ligase herc4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Q3_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.380e-61
Identity = 102/208 (49.04%), Postives = 131/208 (62.98%), Query Frame = 0
Query:    2 IACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSKDNTVPEPAPVDLSDLSPVGLGSSA--QVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKGLSVVDPGP 207
            +ACGG HSAV T    VF +GFNRYGQ G G   N +  P PV++S     G+GSS   Q++CGRHH+++LT  G +++WGA SFG+LG  DP+K V  P EV  F   PL   + GDFH++ L      ++WGYG+EGQGG G+ LH+RTPR V  L+   I Q+ CG WWSM +T  G  Y+WG  DGGW GL     L  V+P P
Sbjct:  186 VACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMS-----GIGSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCP 388          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A4D9DAH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAH8_9STRA)

HSP 1 Score: 199 bits (505), Expect = 5.340e-58
Identity = 102/223 (45.74%), Postives = 131/223 (58.74%), Query Frame = 0
Query:    2 IACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSKDNTVPEPAPVDLSDLSPVGLGSSA--QVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYC---------------YSWGCADGGWTGLALPKGLSVVDPGP 207
            +ACGG HSAV T    VF +GFNRYGQ G G   N +  P PV++S     G+GSS   Q++CGRHH+++LT  G +++WGA SFG+LG  DP+K V  P EV  F   PL   + GDFH++ L      ++WGYG+EGQGG G+ LH+RTPR V  L+   I Q+ CG WWSM +T  G                 Y+WG  DGGW GL     L  V+P P
Sbjct:  102 VACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMS-----GIGSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGCVGGKGRGGWRGVLVRLYTWGYGDGGWLGLERASKLPYVEPCP 319          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A7S3GVQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVQ9_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.050e-53
Identity = 86/180 (47.78%), Postives = 118/180 (65.56%), Query Frame = 0
Query:    1 QIACGGYHSAVVTDAGRVFAWGFNRYGQCGNG----SKDNTVPEPAPVDLSDLSPVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAIT 176
             +ACGG HS V+TD+GRVF WG NR GQCG G     K ++V EP PVD S L+  G      ++ GR+HSA+L+ +G ++TWG   FG+LG +D +KT   P EV  FS NP+   SAGDFHM+AL++   V+SWGYG +GQ GH  +L++R PRR++    + I  V CG  +S+ +T
Sbjct:   37 NVACGGSHSGVITDSGRVFMWGLNRSGQCGQGLSAKGKSDSVLEPRPVDFSHLANHGTLGVKSLVLGRNHSAMLSTTGRVFTWGEAGFGRLGLNDVKKTQLIPAEVMAFSKNPVVTLSAGDFHMLALTQDGQVYSWGYGVDGQTGHCVMLNVRCPRRIDFFDTMHIRDVCCGAGYSLVLT 216          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A812WWZ6_SYMMI (Rcbtb2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WWZ6_SYMMI)

HSP 1 Score: 172 bits (435), Expect = 3.440e-50
Identity = 86/185 (46.49%), Postives = 115/185 (62.16%), Query Frame = 0
Query:   21 WGFNRYGQCGNGSKDNTVPEPAPVDLSDLSPVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRR-VNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKGLSVVD 204
            WG NR GQ G G K  ++ EP PVD +D+   G    +Q++CGR+H+ LLT  G +Y+WGA  FG+LG  D  K   TP+EV  F +   +  +AGDFH +A+    AVFSWGYG EGQ G+GS +++RTPR+ V   +DV I  + CG  WS A+T  G  Y+WG  DGGW G+  P  L  V+
Sbjct:    2 WGLNRNGQTGTGVKAESILEPRPVDRTDI---GRKVPSQLVCGRNHTCLLTTEGRVYSWGAAGFGRLGVMDSRKIQHTPREVQQFRNITCQYIAAGDFHTLAIDSEGAVFSWGYGLEGQCGNGSTMNVRTPRQIVFPDEDVEIQDLTCGSSWSFALTTTGALYTWGYGDGGWLGICPPAELPYVE 183          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A7S2G301_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G301_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.740e-40
Identity = 70/144 (48.61%), Postives = 94/144 (65.28%), Query Frame = 0
Query:   61 ICGRHHSALLTGSGALYTWGACSFGKLG------QSDPEKTVC-TPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALP 197
            +CGRHHSALLT  G++Y+WGA SFG+LG       S P  T   TP+ +       +++ +AGD HM+AL+R   VFSWGY AEGQ GHG+ LH RTPR + +L+ V +T++ CG W+S  I+ +G  Y+WG  DGGW G   P
Sbjct:    1 VCGRHHSALLTDRGSVYSWGATSFGRLGIHFEQTASAPYPTKQRTPRLIQSLERFAVRRIAAGDLHMLALTRDRRVFSWGYSAEGQCGHGTWLHGRTPRPIEALRHVLVTKIACGAWFSAVISAEGDLYTWGYGDGGWLGQGAP 144          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A7S1CDT0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDT0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.390e-29
Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 0
Query:    1 QIACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSK-DNTVPEPAPVDLSDLSPVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALP 197
            Q++ G  HSA +T+AG+VF WG+   G+ G+G + D  VP+   V L+D   V      QV+CG  H+A LT  G L+TWG    G+LG    E     P+ V F     + Q + G  H  AL+    V +WG GA G+ GHG  L    P  V SL   P+ QV+CG   S A++ DG  ++WG  D G  G  +P
Sbjct:  246 QLSLGTSHSAALTEAGKVFTWGYGGDGRLGHGDQSDMLVPKALDV-LADEHVV------QVVCGELHTAALTDDGRLFTWGLGKDGRLGLGTTESHH-VPRAVEFSRGVAITQVACGGLHTAALTSDGQVLTWGLGASGRLGHGDELDQMVPTLVRSLAGTPMQQVLCGGHHSAALSGDGRVFTWGFDDDGRLGHGVP 435          
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Match: A0A0G4FC04_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FC04_VITBC)

HSP 1 Score: 123 bits (308), Expect = 6.870e-29
Identity = 78/225 (34.67%), Postives = 103/225 (45.78%), Query Frame = 0
Query:    1 QIACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSKDNTVPEPAPVDLSDLSPVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPE-KTVCTPQEVTFFSDNPLKQASAGDFHMVALSRRMA-------------------VFSWGYGAEGQGGHGSLLHMRTPRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKGLSVVDP 205
             +ACGG+HSA V ++G V+ WG  R GQ G G   + +    P  +  L    +    QV CG HHSA +T SG LYTWG    G+LG    E + +  P+ V   S   + Q S GDFH   L    A                   V++WG G  G+ GHG       P  V  L  V +TQV CG   + A+T  G  Y+WG   G +  L     L+V+ P
Sbjct:   49 SVACGGHHSAAVGESGEVYVWGGGRRGQLGTGDTKDVI---LPKAIRSLQSKAI---RQVACGEHHSAAVTESGVLYTWGLPRNGRLGHGREEGEMLLVPKVVEALSGQQVVQVSCGDFHTACLVNATAAQQTSATAAAAGGTPQPTSVYTWGMGLSGRLGHGDETDRYVPTSVEGLAVVQVTQVCCGGHHTAAVTESGQMYTWG--GGAFGKLGHGSRLAVMTP 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11602.1036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE1_ECTSI1.820e-11679.81Similar to retinitis pigmentosa GTPase regulator n... [more]
A0A835Z434_9STRA1.210e-6350.71Regulator of chromosome condensation 1/beta-lactam... [more]
K8Z8W0_NANGC1.470e-6149.04Hect domain and rld 4 (Fragment) n=1 Tax=Nannochlo... [more]
W7U0Q3_9STRA2.380e-6149.04Putative e3 ubiquitin-protein ligase herc4 n=1 Tax... [more]
A0A4D9DAH8_9STRA5.340e-5845.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3GVQ9_9STRA4.050e-5347.78Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A812WWZ6_SYMMI3.440e-5046.49Rcbtb2 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A7S2G301_9STRA4.740e-4048.61Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1CDT0_9STRA1.390e-2938.38Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0G4FC04_VITBC6.870e-2934.67Uncharacterized protein n=4 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 18..32
score: 33.33
coord: 2..18
score: 34.31
coord: 174..195
score: 34.85
coord: 116..134
score: 28.07
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 16..70
e-value: 9.9E-12
score: 45.3
coord: 129..175
e-value: 9.2E-9
score: 35.8
coord: 73..123
e-value: 3.2E-10
score: 40.5
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 2..12
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 127..178
score: 12.333
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 16..73
score: 13.66
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 74..126
score: 14.082
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..203
e-value: 2.2E-52
score: 179.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..193
NoneNo IPR availablePANTHERPTHR22870:SF360ULTRAVIOLET-B RECEPTOR UVR8coord: 59..195
coord: 2..158
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 59..195
coord: 2..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11602contigH-paniculata_contig11602:581..7569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11602.1036.1mRNA_H-paniculata_contig11602.1036.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11602 581..7569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11602.1036.1 ID=prot_H-paniculata_contig11602.1036.1|Name=mRNA_H-paniculata_contig11602.1036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
QIACGGYHSAVVTDAGRVFAWGFNRYGQCGNGSKDNTVPEPAPVDLSDLS
PVGLGSSAQVICGRHHSALLTGSGALYTWGACSFGKLGQSDPEKTVCTPQ
EVTFFSDNPLKQASAGDFHMVALSRRMAVFSWGYGAEGQGGHGSLLHMRT
PRRVNSLQDVPITQVVCGRWWSMAITVDGYCYSWGCADGGWTGLALPKGL
SVVDPGPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II