mRNA_H-paniculata_contig4.10363.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: D7FLK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK0_ECTSI) HSP 1 Score: 292 bits (748), Expect = 5.850e-88 Identity = 144/202 (71.29%), Postives = 163/202 (80.69%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
T RFPFLYFDDQ L+RI+PVSGPAEAAGT VTFYGRGFVNTT LACRFG APPVPA F++PNEL CESPPLV + + SGL WS+LSEI QR+ +PLTGSR+LFP +HY PLF QRAVG EVTCNGQDYT+ G T+LYQADASV NISLA GLDP LF+TGENFVNST L+CR+GGS + GTFLS+ + LC
Sbjct: 11043 TGRRFPFLYFDDQALARITPVSGPAEAAGTAVTFYGRGFVNTTKLACRFGLAPPVPAKFVNPNELFCESPPLV--SAVNQDSDDGGSGLRWSSLSEIWQREYEPLTGSRQLFPGSHYHPLFPQRAVGVEVTCNGQDYTDSGATFLYQADASVHNISLAAGLDPGGSALFITGENFVNSTSLSCRIGGSNTPGTFLSASIVLC 11242
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: A0A6H5JBB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB5_9PHAE) HSP 1 Score: 284 bits (727), Expect = 3.890e-85 Identity = 144/214 (67.29%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQG------------LSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
T RFPFLYFDDQ L+RI+PVSGPAEAAGT VTFYGRGFVNTT LACRFG PPVPA F++PNEL CESPPLV + + SGL WS+LSEI QR+ DPLTGSR+LFP AHY PLF QRAVG E+TCNGQDYT+ G T+LYQADASV NISLA GLDP LF+TGENFVNST L+CR+GGS + GTFLS+ + LC
Sbjct: 10720 TGRRFPFLYFDDQASRWGWHTISNQALARITPVSGPAEAAGTAVTFYGRGFVNTTKLACRFGLGPPVPAKFVNPNELFCESPPLV--SAVNQDSDDGGSGLRWSSLSEIWQREYDPLTGSRQLFPGAHYHPLFPQRAVGVEITCNGQDYTDSGTTFLYQADASVHNISLAAGLDPGGSALFITGENFVNSTSLSCRIGGSNTPGTFLSASIVLC 10931
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: A0A836CCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN3_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.070e-46 Identity = 96/199 (48.24%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 13 FPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSS-GTFLSSRLALC 606
FPF Y+ +S I+PVSGPA A G+ V YG FVNTTLL+CRFG A VPA F+S E+ C P L + L+WSAL + +QRD PLTGSR+LF +H +PL+ QR VG EVT NGQDYT+ GI YLYQAD + + A P +++TG FVNST L C+VG S + F+++ L LC
Sbjct: 9373 FPFFYYAATVMSYIAPVSGPASAIGSEVIVYGNSFVNTTLLSCRFGEAVAVPALFVSSQEIVCFVPAL-----------PANNTLEWSALPDQQQRDPHPLTGSRQLFVDSHAYPLYQQRLVGVEVTSNGQDYTDSGIAYLYQADTVISGVP-AVIPTPTSTFVYITGSGFVNSTSLMCQVGDSAPAPAIFVTANLMLC 9559
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: A0A7S1YSE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSE0_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.410e-44 Identity = 86/203 (42.36%), Postives = 115/203 (56.65%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAE-LGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
T+ RF F YF++ + I PVSGPA AGT V +G GF+N+T CRFG VPA F+ EL CE+PP+ + ++W ALSE + +T LF AHY+PL+L + V E+T N QDYT G+T+LYQ D + NI A P+ +F+ G FVNSTHL+CR+G S+ TFL+ LC
Sbjct: 150 TESRFSFYYFENTRMHHIKPVSGPALTAGTMVRVFGEGFINSTNTLCRFGDVE-VPAHFVREQELICETPPI-----------QDVRHMEWLALSEQKNNFTHNVTAKAELFRNAHYYPLYLGKLVSVEITNNAQDYTESGMTFLYQDDVVITNIFNAHVSSPSGGTPIFIQGTGFVNSTHLSCRIGHHASAATFLTREAILC 340
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: A0A8K1CJJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJJ7_PYTOL) HSP 1 Score: 162 bits (411), Expect = 1.140e-42 Identity = 85/202 (42.08%), Postives = 119/202 (58.91%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
+D FPF Y+ +QG+ RI P+ GP AGT VT G GFVN+TLL+CRFG+ PA +++P + C +PP+ ++ + GL +SE R DP TGS LFP AHY+P +L R V EV+ N Q+YT GI ++Y DA + ++S D + +F G N++N+T LACRVG TF+S +L LC
Sbjct: 6766 SDSGFPFFYYPEQGVRRIDPIFGPGRGAGTVVTVEGSGFVNSTLLSCRFGFVV-TPAEYLTPTLMRCRTPPV----------SKYSGGLAPVPISEYRNTYPDPTTGSAYLFPTAHYYPQYLTRLVTVEVSNNQQEYTLSGINFMYYDDAELLSVSPKQAYDVSSTTIFAYGRNYINTTALACRVGMRVFPATFVSPKLLLC 6956
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: A0A482S181_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S181_9ARCH) HSP 1 Score: 161 bits (407), Expect = 3.920e-42 Identity = 99/210 (47.14%), Postives = 123/210 (58.57%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDP------LTG--SRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
T R PF Y+ D+ LSRISPVSGPA+AAGT+V +G GFVNTTLL CRFG P F+S + + C +PPL + + GL SALSE R DP L G + RLFP AH++PL+ QR V EV+ N QD+T+ GI +LYQ DA V +I G A + V G NFVNST L CR+G + TFL+ LC
Sbjct: 6535 TTSRTPFFYYSDEALSRISPVSGPAKAAGTKVNVFGTGFVNTTLLTCRFG-GTLGPGIFVSSSYIICPTPPLDM---------LASGGLKSSALSEQFNRFPDPAYLQLGLVGRAAYRLFPTAHFYPLYNQRLVTVEVSNNNQDFTHSGINFLYQQDAFVDSILPNVGQVNARTPIVVKGNNFVNSTLLRCRIGEYVAMPTFLAPDQILC 6734
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: W2PB50_PHYPN (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PB50_PHYPN) HSP 1 Score: 158 bits (399), Expect = 5.450e-42 Identity = 89/203 (43.84%), Postives = 124/203 (61.08%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAE-LGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
TD PF Y+++QG+ ISP GPA AAGTR+ G VN++LL+CR GY P +ISP ++ C +PPL PT +G GL ++L E R + VDP GS LFP AHY+P + R V EV+ N QD++ GI +LY D +++ I+ D E L +F G+NF+N+T LACR+G T + TF++S+L LC
Sbjct: 272 TDTLIPFTYYEEQGVRSISPTFGPAHAAGTRIDVDGVALVNSSLLSCRVGYVV-TPGEYISPTKMRCTTPPL--PTHSG--------GLVPASLPEYRNQYVDPNVGSFYLFPDAHYYPQYFTRLVSVEVSNNQQDFSLSGINFLYYQDETLEAIAPTQAFDSDEPLLIFAYGQNFINTTALACRLGLQTFAATFVTSKLLLC 463
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: V9EM12_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=V9EM12_PHYPR) HSP 1 Score: 160 bits (404), Expect = 9.680e-42 Identity = 89/203 (43.84%), Postives = 124/203 (61.08%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAE-LGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
TD PF Y+++QG+ ISP GPA AAGTR+ G VN++LL+CR GY P +ISP ++ C +PPL PT +G GL ++L E R + VDP GS LFP AHY+P + R V EV+ N QD++ GI +LY D +++ I+ D E L +F G+NF+N+T LACR+G T + TF++S+L LC
Sbjct: 517 TDTLIPFTYYEEQGVRSISPTFGPAHAAGTRIDMDGVALVNSSLLSCRVGYVV-TPGEYISPTKMRCTTPPL--PTHSG--------GLVPASLPEYRNQYVDPNVGSFYLFPDAHYYPQYFTRLVSVEVSNNQQDFSLSGINFLYYQDETLEAIAPTQAFDSDEPLSIFAYGQNFINTTALACRLGLQTFAATFVTSKLLLC 708
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: K3X6P9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6P9_GLOUD) HSP 1 Score: 158 bits (399), Expect = 4.640e-41 Identity = 89/201 (44.28%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 4 DHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
D FPF+Y+ +QG+ RISPV GPA AAGT VT G GFVN++LLACRFG+ P ++SP ++C +PPL P +G GL LSE DP GS LFP +HY+P + R V EV+ N QD++ G+ +LY D ++ I D A L +F G NF+NST L CR+G + TF++S+L LC
Sbjct: 6220 DTGFPFVYYVEQGVRRISPVFGPAFAAGTTVTVEGSGFVNSSLLACRFGFVM-TPGEYLSPRRMTCVTPPL--PKYSG--------GLQSVPLSEHCNTFPDPSHGSVYLFPDSHYYPQYWSRLVSFEVSNNRQDFSLSGVNFLYYQDTTLSAIYPPRAYDVATLSIFAKGANFINSTSLTCRLGLHVVNATFITSQLLLC 6409
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Match: A0A418BPR6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BPR6_9STRA) HSP 1 Score: 157 bits (398), Expect = 5.860e-41 Identity = 96/202 (47.52%), Postives = 118/202 (58.42%), Query Frame = 1
Query: 1 TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGYAPPVPATFISPNELSCESPPLVIPTVTGTRGAERTSGLDWSALSEIRQRDVDPLTGSRRLFPRAHYFPLFLQRAVGAEVTCNGQDYTNRGITYLYQADASVQNISLAGGLDPAELGLFVTGENFVNSTHLACRVGGSTSSGTFLSSRLALC 606
T R PF ++ L RI PV GPA AAG+RV +G GFVN++ L CRFG +PA+F SP +L+C +PPL + GL LSE R DP TG+R LFP A +FPL R V E++ N QD+T GI YLY DA+V I A +GLFV G NF+NST LACRVG ST G F++S L LC
Sbjct: 1081 TSSRHPFYFYPCPTLRRIFPVFGPAFAAGSRVDVFGTGFVNSSGLVCRFGEHV-LPASFRSPFQLTCLTPPL----------DPYSGGLQPLPLSEQRHAYPDPSTGTRLLFPTARHFPLVQGRLVSVEISNNHQDFTFTGINYLYYQDATVSAIKPTQLYAAANVGLFVQGLNFINSTLLACRVGVSTVPGVFVTSWLVLC 1271 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4.10363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4.10363.1 >prot_H-paniculata_contig4.10363.1 ID=prot_H-paniculata_contig4.10363.1|Name=mRNA_H-paniculata_contig4.10363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp TDHRFPFLYFDDQGLSRISPVSGPAEAAGTRVTFYGRGFVNTTLLACRFGback to top mRNA from alignment at H-paniculata_contig4:31923..32970- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4.10363.1 ID=mRNA_H-paniculata_contig4.10363.1|Name=mRNA_H-paniculata_contig4.10363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1048bp|location=Sequence derived from alignment at H-paniculata_contig4:31923..32970- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4:31923..32970- >mRNA_H-paniculata_contig4.10363.1 ID=mRNA_H-paniculata_contig4.10363.1|Name=mRNA_H-paniculata_contig4.10363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig4:31923..32970- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |