mRNA_H-paniculata_contig3992.10342.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7FIJ1_ECTSI (Ammonium transporter (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ1_ECTSI) HSP 1 Score: 301 bits (772), Expect = 2.040e-101 Identity = 147/218 (67.43%), Postives = 169/218 (77.52%), Query Frame = 1
Query: 1 SMSSSIEARLDMLEKQVGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLN-VSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
S ++ +E RL+ LE + G A + D DTAWIIWCGILVF MQVGF+MLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYG D GF+GT F + + + DD +G + A WFFQWAFAATAATVVSGAVAER+KI AYVQLS+ ++ IYP VVHWAWS+GGWASP RC + +YQ C E+R LL CG+ DFAGAGVVHMTGG
Sbjct: 2 STAAELEDRLEYLESRAD---GFASAQDLDTAWIIWCGILVFLMQVGFSMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGKDVGGFIGTDSFAFSGKATYQDDGRGVEIAHWFFQWAFAATAATVVSGAVAERIKIAAYVQLSVLVTFLIYPVVVHWAWSEGGWASPHRCEDTTTAADYQLCREESRALLLGCGATDFAGAGVVHMTGG 216
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE) HSP 1 Score: 296 bits (757), Expect = 5.470e-95 Identity = 147/218 (67.43%), Postives = 167/218 (76.61%), Query Frame = 1
Query: 1 SMSSSIEARLDMLEKQVGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQ-FDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
S ++ +E RL LE GLA + D DTAWIIWCGILVF MQVGF+MLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYG D GF+GT F + + +D QG + A+WFF+WAFAATAATVVSGAVAER+KI AYVQLS+ I+ IYP VVHW WS+GGWASP RC + +YQ C E+R LL CG+ DFAGAGVVHMTGG
Sbjct: 2 STAAELEDRLAYLESLTD---GLASAQDLDTAWIIWCGILVFLMQVGFSMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGNDVGGFIGTDSFAFSGNATHQEDGQGAEIAQWFFEWAFAATAATVVSGAVAERIKIAAYVQLSVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGG 216
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 232 bits (592), Expect = 5.190e-69 Identity = 119/210 (56.67%), Postives = 145/210 (69.05%), Query Frame = 1
Query: 25 RLDMLEKQVGELTG-LARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
R+ LE+++G+L A + D D WII +LVFFMQVGFAMLEVGS+S KNTKAVL+KN+ DA+LGAICWW +G G A+G D GF+GTS F L+ + G K AEW F WAFAAT+ T+VSGA+AERVKIV+YV +I ++ FIYP VVHWAW GWASP+R E PLL CG+ADFAG+GVVHM GG
Sbjct: 16 RVAELEERLGQLYAESALATDLDVVWIIVSAVLVFFMQVGFAMLEVGSVSSKNTKAVLLKNIGDASLGAICWWLVGFGLAFGDDAHGFIGTSVFALHGGESRFGTSGLKEAEWVFDWAFAATSVTIVSGAIAERVKIVSYVTYAIALTSFIYPVVVHWAWHPDGWASPYRT------------ADEGAPLLSGCGAADFAGSGVVHMVGG 213
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 205 bits (522), Expect = 1.710e-60 Identity = 108/196 (55.10%), Postives = 130/196 (66.33%), Query Frame = 1
Query: 76 SADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDD----VQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
S D D W+++ ILVFFMQ GFAMLEVGS+S KNTK +LIKN+ DA+LGAICWW LG+G A+G F+GT+ F L + F+ D G +A W FQWAFAATAAT+VSGAVAERV AY+ S+ ++ FIYP VVHW W+ GGWAS +R LLF CG DFAG+GVVHMTGG
Sbjct: 26 SDDMDIFWLMFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAFGDTSGKFIGTNNFDLKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWA-GGWASAWR----------------ETDLLFGCGVIDFAGSGVVHMTGG 204
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.100e-59 Identity = 110/205 (53.66%), Postives = 134/205 (65.37%), Query Frame = 1
Query: 49 VGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDD----VQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
+G++ LA D D W+++ ILVFFMQ GFAMLEVGS+S KNTK +LIKN+ DA+LGAICWW G+G A G + F+G++ F L S F+ D G +A W FQWAFAATAAT+VSGAVAERV AY+ S+ ++ FIYP VVHW W GGWAS + V E LLF CG DFAG+GVVHMTGG
Sbjct: 23 LGDVASLA--GDMDIFWLLFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLFGYGVALGDTKGRFIGSNAFALKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWG-GGWASAW--------------VDE--DLLFDCGVIDFAGSGVVHMTGG 208
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G888_ECTSI (Ammonium transporter (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G888_ECTSI) HSP 1 Score: 193 bits (491), Expect = 1.270e-58 Identity = 103/192 (53.65%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 88 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLL-NVSQF---DDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
D+ W++ +VFFMQ GFAMLE GS+S KNTK +LIKN+ D+A+GAI WW G+G A+G D GF+GT+ F L + S F D +A W FQWAFAA+A T+VSGA+AER AYV S I+ FIYP V HWAWSDGGWAS A +D+ LLF CG DFAG+GVVHMTGG
Sbjct: 16 DSLWVLLGASMVFFMQAGFAMLEAGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGKDSGGFLGTTGFALKDESMFGTTSGDFVSLSYANWIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWAS------ARLADDDD--------LLFGCGVTDFAGSGVVHMTGG 193
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 196 bits (497), Expect = 9.820e-57 Identity = 102/192 (53.12%), Postives = 122/192 (63.54%), Query Frame = 1
Query: 88 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQF----DDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
DTAW++ +VFFMQ GFAMLEVGS+S KNTK +LIKN+ D+A+GAI WW G+G A+G D GFVG + F L D +A W FQW FAA+A T+VSGA+AER AYV S ++ FIYP V HWAWSDGGWAS A +D+ LLF CG DFAG+GVVHMTGG
Sbjct: 16 DTAWVLLGAAMVFFMQAGFAMLEVGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGRDSGGFVGVTGFALKGEDLYGTSTGDFDALSYANWLFQWTFAASATTIVSGAMAERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWAS------ARLADDDD--------LLFGCGVTDFAGSGVVHMTGG 193
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.090e-54 Identity = 99/192 (51.56%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 88 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDDVQGR----KFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 651
D+ W++ +VFFMQ GFAMLE GS+S KNTK +LIKN+ D+A+GAI WW G+G A+G D GF+GT+ F L G +A+W FQWAFAA+A T+VSGA+AER AYV S I+ FIYP V HWAWSDGGWAS A +D+ LLF CG+ + AG+GVVHMTGG
Sbjct: 16 DSLWVLLGAAMVFFMQAGFAMLEAGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGKDSGGFLGTTGFALKDESMFGTTSGDFVPLSYAKWIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWAS------ARLADDDD--------LLFGCGAIELAGSGVVHMTGG 193
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.470e-53 Identity = 103/198 (52.02%), Postives = 125/198 (63.13%), Query Frame = 1
Query: 88 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQW------GFVGTSEFLLNVSQF---DDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGGT 654
+T W+++ +LVFFMQ GFAMLEVG++ KN K +LIKN+ DA+LG I W+T G+G A G+D + GF+GT FLL F DDV G +A W FQWAFAAT AT+VSGAV ERV AYV ++ + FIYP VVHW WS GGWAS +R LL CG DFAG+GVVHMTGGT
Sbjct: 27 NTFWLMFGAVLVFFMQTGFAMLEVGAVQAKNAKNILIKNVFDASLGGIMWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRGSGDDV-GINWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWR----------------ETELLMDCGVLDFAGSGVVHMTGGT 207
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A7S2QUY7_9STRA (Ammonium transporter n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUY7_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.440e-52 Identity = 101/209 (48.33%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 49 VGELTGLARSADFDTA----WIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGA----DQWGFVGTSEFLLN-VSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTG 648
V E A++DT+ W+++ ILVFFMQ GFAMLEVG ++ KNTK +LIKN+ DA++GAICWW G GF+ + W +G F LN +S +D A W FQWAFAATAAT+VSGAVAERV Y+ S+ ++ FIYP VVHW W+ GWAS +R SE LLF CG DFAG+GVVH+ G
Sbjct: 24 VSETAKATAFANYDTSNTNFWLMFGAILVFFMQCGFAMLEVGMVNIKNTKNILIKNVFDASIGAICWWAFGWGFSNSTPTHGNNWSVIGDDNFFLNGISSTEDPAGNGSKAAWLFQWAFAATAATIVSGAVAERVTFGCYIVYSVVLTSFIYPVVVHWGWNTYGWASAWR-------------ESE---LLFDCGVTDFAGSGVVHLCG 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3992.10342.1 >prot_H-paniculata_contig3992.10342.1 ID=prot_H-paniculata_contig3992.10342.1|Name=mRNA_H-paniculata_contig3992.10342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp MSSSIEARLDMLEKQVGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLback to top mRNA from alignment at H-paniculata_contig3992:3351..14096+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3992.10342.1 ID=mRNA_H-paniculata_contig3992.10342.1|Name=mRNA_H-paniculata_contig3992.10342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10746bp|location=Sequence derived from alignment at H-paniculata_contig3992:3351..14096+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3992:3351..14096+ >mRNA_H-paniculata_contig3992.10342.1 ID=mRNA_H-paniculata_contig3992.10342.1|Name=mRNA_H-paniculata_contig3992.10342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig3992:3351..14096+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |