prot_H-paniculata_contig3992.10342.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig3992.10342.1
Unique Name	prot_H-paniculata_contig3992.10342.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	223

Homology

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7FIJ1_ECTSI (Ammonium transporter (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ1_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 5.610e-101
Identity = 146/216 (67.59%), Postives = 168/216 (77.78%), Query Frame = 0

Query:    2 SSSIEARLDMLEKQVGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLN-VSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            ++ +E RL+ LE +     G A + D DTAWIIWCGILVF MQVGF+MLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYG D  GF+GT  F  +  + + DD +G + A WFFQWAFAATAATVVSGAVAER+KI AYVQLS+ ++  IYP VVHWAWS+GGWASP RC     + +YQ C  E+R LL  CG+ DFAGAGVVHMTGG
Sbjct:    4 AAELEDRLEYLESRAD---GFASAQDLDTAWIIWCGILVFLMQVGFSMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGKDVGGFIGTDSFAFSGKATYQDDGRGVEIAHWFFQWAFAATAATVVSGAVAERIKIAAYVQLSVLVTFLIYPVVVHWAWSEGGWASPHRCEDTTTAADYQLCREESRALLLGCGATDFAGAGVVHMTGG 216

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 1.490e-94
Identity = 146/216 (67.59%), Postives = 166/216 (76.85%), Query Frame = 0

Query:    2 SSSIEARLDMLEKQVGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQ-FDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            ++ +E RL  LE       GLA + D DTAWIIWCGILVF MQVGF+MLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYG D  GF+GT  F  + +    +D QG + A+WFF+WAFAATAATVVSGAVAER+KI AYVQLS+ I+  IYP VVHW WS+GGWASP RC     + +YQ C  E+R LL  CG+ DFAGAGVVHMTGG
Sbjct:    4 AAELEDRLAYLESLTD---GLASAQDLDTAWIIWCGILVFLMQVGFSMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGNDVGGFIGTDSFAFSGNATHQEDGQGAEIAQWFFEWAFAATAATVVSGAVAERIKIAAYVQLSVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGG 216

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 5.000e-69
Identity = 119/210 (56.67%), Postives = 145/210 (69.05%), Query Frame = 0

Query:    8 RLDMLEKQVGELTG-LARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            R+  LE+++G+L    A + D D  WII   +LVFFMQVGFAMLEVGS+S KNTKAVL+KN+ DA+LGAICWW +G G A+G D  GF+GTS F L+  +      G K AEW F WAFAAT+ T+VSGA+AERVKIV+YV  +I ++ FIYP VVHWAW   GWASP+R               E  PLL  CG+ADFAG+GVVHM GG
Sbjct:   16 RVAELEERLGQLYAESALATDLDVVWIIVSAVLVFFMQVGFAMLEVGSVSSKNTKAVLLKNIGDASLGAICWWLVGFGLAFGDDAHGFIGTSVFALHGGESRFGTSGLKEAEWVFDWAFAATSVTIVSGAIAERVKIVSYVTYAIALTSFIYPVVVHWAWHPDGWASPYRT------------ADEGAPLLSGCGAADFAGSGVVHMVGG 213

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.650e-60
Identity = 108/196 (55.10%), Postives = 130/196 (66.33%), Query Frame = 0

Query:   25 SADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDD----VQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            S D D  W+++  ILVFFMQ GFAMLEVGS+S KNTK +LIKN+ DA+LGAICWW LG+G A+G     F+GT+ F L  + F+ D      G  +A W FQWAFAATAAT+VSGAVAERV   AY+  S+ ++ FIYP VVHW W+ GGWAS +R                   LLF CG  DFAG+GVVHMTGG
Sbjct:   26 SDDMDIFWLMFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAFGDTSGKFIGTNNFDLKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWA-GGWASAWR----------------ETDLLFGCGVIDFAGSGVVHMTGG 204

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.030e-59
Identity = 110/205 (53.66%), Postives = 134/205 (65.37%), Query Frame = 0

Query:   16 VGELTGLARSADFDTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDD----VQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            +G++  LA   D D  W+++  ILVFFMQ GFAMLEVGS+S KNTK +LIKN+ DA+LGAICWW  G+G A G  +  F+G++ F L  S F+ D      G  +A W FQWAFAATAAT+VSGAVAERV   AY+  S+ ++ FIYP VVHW W  GGWAS +              V E   LLF CG  DFAG+GVVHMTGG
Sbjct:   23 LGDVASLA--GDMDIFWLLFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLFGYGVALGDTKGRFIGSNAFALKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWG-GGWASAW--------------VDE--DLLFDCGVIDFAGSGVVHMTGG 208

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G888_ECTSI (Ammonium transporter (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G888_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.230e-58
Identity = 103/192 (53.65%), Postives = 125/192 (65.10%), Query Frame = 0

Query:   29 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLL-NVSQF---DDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            D+ W++    +VFFMQ GFAMLE GS+S KNTK +LIKN+ D+A+GAI WW  G+G A+G D  GF+GT+ F L + S F     D     +A W FQWAFAA+A T+VSGA+AER    AYV  S  I+ FIYP V HWAWSDGGWAS      A  +D+          LLF CG  DFAG+GVVHMTGG
Sbjct:   16 DSLWVLLGASMVFFMQAGFAMLEAGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGKDSGGFLGTTGFALKDESMFGTTSGDFVSLSYANWIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWAS------ARLADDDD--------LLFGCGVTDFAGSGVVHMTGG 193

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 9.470e-57
Identity = 102/192 (53.12%), Postives = 122/192 (63.54%), Query Frame = 0

Query:   29 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQF----DDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            DTAW++    +VFFMQ GFAMLEVGS+S KNTK +LIKN+ D+A+GAI WW  G+G A+G D  GFVG + F L           D     +A W FQW FAA+A T+VSGA+AER    AYV  S  ++ FIYP V HWAWSDGGWAS      A  +D+          LLF CG  DFAG+GVVHMTGG
Sbjct:   16 DTAWVLLGAAMVFFMQAGFAMLEVGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGRDSGGFVGVTGFALKGEDLYGTSTGDFDALSYANWLFQWTFAASATTIVSGAMAERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWAS------ARLADDDD--------LLFGCGVTDFAGSGVVHMTGG 193

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.050e-54
Identity = 99/192 (51.56%), Postives = 123/192 (64.06%), Query Frame = 0

Query:   29 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEFLLNVSQFDDDVQGR----KFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGG 216
            D+ W++    +VFFMQ GFAMLE GS+S KNTK +LIKN+ D+A+GAI WW  G+G A+G D  GF+GT+ F L          G      +A+W FQWAFAA+A T+VSGA+AER    AYV  S  I+ FIYP V HWAWSDGGWAS      A  +D+          LLF CG+ + AG+GVVHMTGG
Sbjct:   16 DSLWVLLGAAMVFFMQAGFAMLEAGSVSIKNTKNILIKNIGDSAMGAIGWWLFGNGLAFGKDSGGFLGTTGFALKDESMFGTTSGDFVPLSYAKWIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWAS------ARLADDDD--------LLFGCGAIELAGSGVVHMTGG 193

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.420e-53
Identity = 103/198 (52.02%), Postives = 125/198 (63.13%), Query Frame = 0

Query:   29 DTAWIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQW------GFVGTSEFLLNVSQF---DDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTGGT 217
            +T W+++  +LVFFMQ GFAMLEVG++  KN K +LIKN+ DA+LG I W+T G+G A G+D +      GF+GT  FLL    F    DDV G  +A W FQWAFAAT AT+VSGAV ERV   AYV  ++ +  FIYP VVHW WS GGWAS +R                   LL  CG  DFAG+GVVHMTGGT
Sbjct:   27 NTFWLMFGAVLVFFMQTGFAMLEVGAVQAKNAKNILIKNVFDASLGGIMWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRGSGDDV-GINWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWR----------------ETELLMDCGVLDFAGSGVVHMTGGT 207

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BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Match: A0A7S2QUY7_9STRA (Ammonium transporter n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUY7_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.360e-52
Identity = 101/209 (48.33%), Postives = 127/209 (60.77%), Query Frame = 0

Query:   16 VGELTGLARSADFDTA----WIIWCGILVFFMQVGFAMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGA----DQWGFVGTSEFLLN-VSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLSIFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSCGSADFAGAGVVHMTG 215
            V E       A++DT+    W+++  ILVFFMQ GFAMLEVG ++ KNTK +LIKN+ DA++GAICWW  G GF+       + W  +G   F LN +S  +D       A W FQWAFAATAAT+VSGAVAERV    Y+  S+ ++ FIYP VVHW W+  GWAS +R              SE   LLF CG  DFAG+GVVH+ G
Sbjct:   24 VSETAKATAFANYDTSNTNFWLMFGAILVFFMQCGFAMLEVGMVNIKNTKNILIKNVFDASIGAICWWAFGWGFSNSTPTHGNNWSVIGDDNFFLNGISSTEDPAGNGSKAAWLFQWAFAATAATIVSGAVAERVTFGCYIVYSVVLTSFIYPVVVHWGWNTYGWASAWR-------------ESE---LLFDCGVTDFAGSGVVHLCG 216

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3992.10342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIJ1_ECTSI	5.610e-101	67.59	Ammonium transporter (ISS) n=1 Tax=Ectocarpus sili...	[more]
A0A6H5L6H3_9PHAE	1.490e-94	67.59	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
A0A6H5JVJ2_9PHAE	5.000e-69	56.67	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
D7FR22_ECTSI	1.650e-60	55.10	Ammonium transporter n=1 Tax=Ectocarpus siliculosu...	[more]
D7G243_ECTSI	2.030e-59	53.66	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
D7G888_ECTSI	1.230e-58	53.65	Ammonium transporter (Partial) (Fragment) n=1 Tax=...	[more]
D7G265_ECTSI	9.470e-57	53.13	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A6H5J7X8_9PHAE	1.050e-54	51.56	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
D7G3S7_ECTSI	1.420e-53	52.02	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A7S2QUY7_9STRA	2.360e-52	48.33	Ammonium transporter n=1 Tax=Triparma pacifica Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029020	Ammonium/urea transporter	GENE3D	1.10.3430.10		coord: 12..220 e-value: 3.0E-57 score: 196.2
IPR024041	Ammonium transporter AmtB-like domain	PFAM	PF00909	Ammonium_transp	coord: 31..217 e-value: 1.5E-42 score: 145.8
None	No IPR available	PANTHER	PTHR11730	AMMONIUM TRANSPORTER	coord: 24..217
None	No IPR available	PANTHER	PTHR11730:SF6	AMMONIUM TRANSPORTER	coord: 24..217
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..89
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 139..144
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 145..166
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 119..138
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..70
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 167..222
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..50
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 90..118
None	No IPR available	SUPERFAMILY	111352	Ammonium transporter	coord: 27..217
None	No IPR available	TMHMM	TMhelix		coord: 31..50
None	No IPR available	TMHMM	TMhelix		coord: 63..82
None	No IPR available	TMHMM	TMhelix		coord: 119..137
None	No IPR available	TMHMM	TMhelix		coord: 144..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3992	contig	H-paniculata_contig3992:3354..14096 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3992.10342.1	mRNA_H-paniculata_contig3992.10342.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig3992 3351..14096 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig3992.10342.1 ID=prot_H-paniculata_contig3992.10342.1|Name=mRNA_H-paniculata_contig3992.10342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp
MSSSIEARLDMLEKQVGELTGLARSADFDTAWIIWCGILVFFMQVGFAML
EVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGADQWGFVGTSEF
LLNVSQFDDDVQGRKFAEWFFQWAFAATAATVVSGAVAERVKIVAYVQLS
IFISLFIYPFVVHWAWSDGGWASPFRCLHAHASDEYQQCVSEARPLLFSC
GSADFAGAGVVHMTGGTYVQGY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029020	Ammonium/urea_transptr
IPR024041	NH4_transpt_AmtB-like_dom